Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

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The map label for this gene is yejE [H]

Identifier: 170750712

GI number: 170750712

Start: 4578691

End: 4579911

Strand: Direct

Name: yejE [H]

Synonym: Mrad2831_4323

Alternate gene names: 170750712

Gene position: 4578691-4579911 (Clockwise)

Preceding gene: 170750711

Following gene: 170750713

Centisome position: 75.33

GC content: 68.55

Gene sequence:

>1221_bases
ATGAACGAGGTCACGCGTCCCGGCGACAGCGAGGTCGTGCCCGCGCCGATGCCCGGCGCCCAGCCGCTGGTCCTGCGGTC
GGACGAGGGGGCGCCGCCCCCGGTCCCGCCCGAGGCCGCCGGCCGGCGCGCCCGGCTCTCGCCGCTCAACCGGCGGCGCC
TCGACAATTTCCGCCGCAACCGGCTCGGCTACGGATCGTTCGTGATCTTCACGATCCTGTTCGTGCTCAGCCTGTTCGCG
GAGTTCATCGCCAACGACCGCCCGATCGTGATGTCCTACAAGGGCGAGTGGCTGGTCCCGGTCCTGGTCGACTACCCGGA
GGAGAAGTTCGGCGGCTTCCTCGCCACGACCGACTACCGCTCCCCCGAGATTCGCCGGGAGATCGCGGCGAACGGCTGGG
CGCTGTGGCCGCCGATCCCGTTCTCGTACGACACGATCAACGAGGACCTGCCGACGCCGTCGCCGTCGCCGCCCACCTGG
ATGCTCACGGACGCGCAGTGCAAGCCGGTCGCCGAGAAGCTCGGCGGCAGCACCTGCGCGGACATTCCCTGGCACTGGCT
CGGCACCGACAACACCACGCGGGACGTGCTCGCGCGGGTGATCTACGGCTTCCGCATCTCGGTCCTGTTCGGGCTGATCC
TGGCGGCGGTCTCGTCGGTGATCGGCGTCGTCGCGGGCGCCGTGCAGGGCTATTTCGGCGGCTGGGTCGATCTCGCCTTC
CAGCGCTTCATCGAGGTCTGGGGCGGCATCCCGACCCTCTACCTGATCATCATCATCTCGGCCTTCATCGCCCCGGGCTT
CTTCGTCCTGCTCGGGATCATGCTGCTGTTCTCCTGGGTCGCGCTGGTGAGCGTGGTGCGGGCCGAGTTCCTGCGGGCGC
GGAACTTCGAGTATGTCCGCGCCGCCCGGGCGCTGGGCCTGTCGAACATCCGCATCATGACGGTCCATCTGCTGCCGAAT
GCCATGGTGGCGACGCTGACCTTCCTGCCGTTCATCCTGAACGGCTCGATCACCACCCTGACCTCGCTCGACTTCCTCGG
CTTCGGACTGCCGCCGGGCTCGCCGTCCCTCGGAGAGCTTCTCGCGCAGGGCAAGGACAATCTGACCGCGCCCTGGCTCG
GATTGACCGGATTCCTGGTCATCGCCGTGATGTTGAGCCTGCTCGTCTTCGCCGGCGAGGCGGTGCGGGACGCCTTCGAC
CCGCGCAAGACTTTCGCCTGA

Upstream 100 bases:

>100_bases
TGAGCGTCCCCGGTCCCCGTCCCGCGGCCGGCCGGTCGCGGGGCCGCCCGGATCACGGGGCGGCGGGCGCGCGCGCGGCG
CGGCGCGGGAGGCAGCACGG

Downstream 100 bases:

>100_bases
GGCCGCGACCGGGTGGCGAAAATGACGCAGGGCCCCACCCGGCCTTCGCACAACTGTACGAAGATTGCGCATTGTCCCGG
CACGGCCGGACGGCAACCGT

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MNEVTRPGDSEVVPAPMPGAQPLVLRSDEGAPPPVPPEAAGRRARLSPLNRRRLDNFRRNRLGYGSFVIFTILFVLSLFA
EFIANDRPIVMSYKGEWLVPVLVDYPEEKFGGFLATTDYRSPEIRREIAANGWALWPPIPFSYDTINEDLPTPSPSPPTW
MLTDAQCKPVAEKLGGSTCADIPWHWLGTDNTTRDVLARVIYGFRISVLFGLILAAVSSVIGVVAGAVQGYFGGWVDLAF
QRFIEVWGGIPTLYLIIIISAFIAPGFFVLLGIMLLFSWVALVSVVRAEFLRARNFEYVRAARALGLSNIRIMTVHLLPN
AMVATLTFLPFILNGSITTLTSLDFLGFGLPPGSPSLGELLAQGKDNLTAPWLGLTGFLVIAVMLSLLVFAGEAVRDAFD
PRKTFA

Sequences:

>Translated_406_residues
MNEVTRPGDSEVVPAPMPGAQPLVLRSDEGAPPPVPPEAAGRRARLSPLNRRRLDNFRRNRLGYGSFVIFTILFVLSLFA
EFIANDRPIVMSYKGEWLVPVLVDYPEEKFGGFLATTDYRSPEIRREIAANGWALWPPIPFSYDTINEDLPTPSPSPPTW
MLTDAQCKPVAEKLGGSTCADIPWHWLGTDNTTRDVLARVIYGFRISVLFGLILAAVSSVIGVVAGAVQGYFGGWVDLAF
QRFIEVWGGIPTLYLIIIISAFIAPGFFVLLGIMLLFSWVALVSVVRAEFLRARNFEYVRAARALGLSNIRIMTVHLLPN
AMVATLTFLPFILNGSITTLTSLDFLGFGLPPGSPSLGELLAQGKDNLTAPWLGLTGFLVIAVMLSLLVFAGEAVRDAFD
PRKTFA
>Mature_406_residues
MNEVTRPGDSEVVPAPMPGAQPLVLRSDEGAPPPVPPEAAGRRARLSPLNRRRLDNFRRNRLGYGSFVIFTILFVLSLFA
EFIANDRPIVMSYKGEWLVPVLVDYPEEKFGGFLATTDYRSPEIRREIAANGWALWPPIPFSYDTINEDLPTPSPSPPTW
MLTDAQCKPVAEKLGGSTCADIPWHWLGTDNTTRDVLARVIYGFRISVLFGLILAAVSSVIGVVAGAVQGYFGGWVDLAF
QRFIEVWGGIPTLYLIIIISAFIAPGFFVLLGIMLLFSWVALVSVVRAEFLRARNFEYVRAARALGLSNIRIMTVHLLPN
AMVATLTFLPFILNGSITTLTSLDFLGFGLPPGSPSLGELLAQGKDNLTAPWLGLTGFLVIAVMLSLLVFAGEAVRDAFD
PRKTFA

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4239

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788505, Length=361, Percent_Identity=58.1717451523546, Blast_Score=401, Evalue=1e-113,
Organism=Escherichia coli, GI1787054, Length=221, Percent_Identity=30.316742081448, Blast_Score=112, Evalue=6e-26,
Organism=Escherichia coli, GI1787760, Length=223, Percent_Identity=29.1479820627803, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI1787498, Length=221, Percent_Identity=32.579185520362, Blast_Score=102, Evalue=5e-23,
Organism=Escherichia coli, GI1789964, Length=254, Percent_Identity=32.6771653543307, Blast_Score=101, Evalue=8e-23,
Organism=Escherichia coli, GI1789889, Length=223, Percent_Identity=27.3542600896861, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1787549, Length=218, Percent_Identity=28.4403669724771, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 44515; Mature: 44515

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEVTRPGDSEVVPAPMPGAQPLVLRSDEGAPPPVPPEAAGRRARLSPLNRRRLDNFRRN
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHH
RLGYGSFVIFTILFVLSLFAEFIANDRPIVMSYKGEWLVPVLVDYPEEKFGGFLATTDYR
CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEHEECCCHHHHCCEEEECCCC
SPEIRREIAANGWALWPPIPFSYDTINEDLPTPSPSPPTWMLTDAQCKPVAEKLGGSTCA
CHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCCC
DIPWHWLGTDNTTRDVLARVIYGFRISVLFGLILAAVSSVIGVVAGAVQGYFGGWVDLAF
CCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRFIEVWGGIPTLYLIIIISAFIAPGFFVLLGIMLLFSWVALVSVVRAEFLRARNFEYVR
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
AARALGLSNIRIMTVHLLPNAMVATLTFLPFILNGSITTLTSLDFLGFGLPPGSPSLGEL
HHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHH
LAQGKDNLTAPWLGLTGFLVIAVMLSLLVFAGEAVRDAFDPRKTFA
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCHHCCC
>Mature Secondary Structure
MNEVTRPGDSEVVPAPMPGAQPLVLRSDEGAPPPVPPEAAGRRARLSPLNRRRLDNFRRN
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHH
RLGYGSFVIFTILFVLSLFAEFIANDRPIVMSYKGEWLVPVLVDYPEEKFGGFLATTDYR
CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEHEECCCHHHHCCEEEECCCC
SPEIRREIAANGWALWPPIPFSYDTINEDLPTPSPSPPTWMLTDAQCKPVAEKLGGSTCA
CHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCCC
DIPWHWLGTDNTTRDVLARVIYGFRISVLFGLILAAVSSVIGVVAGAVQGYFGGWVDLAF
CCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRFIEVWGGIPTLYLIIIISAFIAPGFFVLLGIMLLFSWVALVSVVRAEFLRARNFEYVR
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
AARALGLSNIRIMTVHLLPNAMVATLTFLPFILNGSITTLTSLDFLGFGLPPGSPSLGEL
HHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHH
LAQGKDNLTAPWLGLTGFLVIAVMLSLLVFAGEAVRDAFDPRKTFA
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]