| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yejE [H]
Identifier: 170750712
GI number: 170750712
Start: 4578691
End: 4579911
Strand: Direct
Name: yejE [H]
Synonym: Mrad2831_4323
Alternate gene names: 170750712
Gene position: 4578691-4579911 (Clockwise)
Preceding gene: 170750711
Following gene: 170750713
Centisome position: 75.33
GC content: 68.55
Gene sequence:
>1221_bases ATGAACGAGGTCACGCGTCCCGGCGACAGCGAGGTCGTGCCCGCGCCGATGCCCGGCGCCCAGCCGCTGGTCCTGCGGTC GGACGAGGGGGCGCCGCCCCCGGTCCCGCCCGAGGCCGCCGGCCGGCGCGCCCGGCTCTCGCCGCTCAACCGGCGGCGCC TCGACAATTTCCGCCGCAACCGGCTCGGCTACGGATCGTTCGTGATCTTCACGATCCTGTTCGTGCTCAGCCTGTTCGCG GAGTTCATCGCCAACGACCGCCCGATCGTGATGTCCTACAAGGGCGAGTGGCTGGTCCCGGTCCTGGTCGACTACCCGGA GGAGAAGTTCGGCGGCTTCCTCGCCACGACCGACTACCGCTCCCCCGAGATTCGCCGGGAGATCGCGGCGAACGGCTGGG CGCTGTGGCCGCCGATCCCGTTCTCGTACGACACGATCAACGAGGACCTGCCGACGCCGTCGCCGTCGCCGCCCACCTGG ATGCTCACGGACGCGCAGTGCAAGCCGGTCGCCGAGAAGCTCGGCGGCAGCACCTGCGCGGACATTCCCTGGCACTGGCT CGGCACCGACAACACCACGCGGGACGTGCTCGCGCGGGTGATCTACGGCTTCCGCATCTCGGTCCTGTTCGGGCTGATCC TGGCGGCGGTCTCGTCGGTGATCGGCGTCGTCGCGGGCGCCGTGCAGGGCTATTTCGGCGGCTGGGTCGATCTCGCCTTC CAGCGCTTCATCGAGGTCTGGGGCGGCATCCCGACCCTCTACCTGATCATCATCATCTCGGCCTTCATCGCCCCGGGCTT CTTCGTCCTGCTCGGGATCATGCTGCTGTTCTCCTGGGTCGCGCTGGTGAGCGTGGTGCGGGCCGAGTTCCTGCGGGCGC GGAACTTCGAGTATGTCCGCGCCGCCCGGGCGCTGGGCCTGTCGAACATCCGCATCATGACGGTCCATCTGCTGCCGAAT GCCATGGTGGCGACGCTGACCTTCCTGCCGTTCATCCTGAACGGCTCGATCACCACCCTGACCTCGCTCGACTTCCTCGG CTTCGGACTGCCGCCGGGCTCGCCGTCCCTCGGAGAGCTTCTCGCGCAGGGCAAGGACAATCTGACCGCGCCCTGGCTCG GATTGACCGGATTCCTGGTCATCGCCGTGATGTTGAGCCTGCTCGTCTTCGCCGGCGAGGCGGTGCGGGACGCCTTCGAC CCGCGCAAGACTTTCGCCTGA
Upstream 100 bases:
>100_bases TGAGCGTCCCCGGTCCCCGTCCCGCGGCCGGCCGGTCGCGGGGCCGCCCGGATCACGGGGCGGCGGGCGCGCGCGCGGCG CGGCGCGGGAGGCAGCACGG
Downstream 100 bases:
>100_bases GGCCGCGACCGGGTGGCGAAAATGACGCAGGGCCCCACCCGGCCTTCGCACAACTGTACGAAGATTGCGCATTGTCCCGG CACGGCCGGACGGCAACCGT
Product: binding-protein-dependent transport systems inner membrane component
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MNEVTRPGDSEVVPAPMPGAQPLVLRSDEGAPPPVPPEAAGRRARLSPLNRRRLDNFRRNRLGYGSFVIFTILFVLSLFA EFIANDRPIVMSYKGEWLVPVLVDYPEEKFGGFLATTDYRSPEIRREIAANGWALWPPIPFSYDTINEDLPTPSPSPPTW MLTDAQCKPVAEKLGGSTCADIPWHWLGTDNTTRDVLARVIYGFRISVLFGLILAAVSSVIGVVAGAVQGYFGGWVDLAF QRFIEVWGGIPTLYLIIIISAFIAPGFFVLLGIMLLFSWVALVSVVRAEFLRARNFEYVRAARALGLSNIRIMTVHLLPN AMVATLTFLPFILNGSITTLTSLDFLGFGLPPGSPSLGELLAQGKDNLTAPWLGLTGFLVIAVMLSLLVFAGEAVRDAFD PRKTFA
Sequences:
>Translated_406_residues MNEVTRPGDSEVVPAPMPGAQPLVLRSDEGAPPPVPPEAAGRRARLSPLNRRRLDNFRRNRLGYGSFVIFTILFVLSLFA EFIANDRPIVMSYKGEWLVPVLVDYPEEKFGGFLATTDYRSPEIRREIAANGWALWPPIPFSYDTINEDLPTPSPSPPTW MLTDAQCKPVAEKLGGSTCADIPWHWLGTDNTTRDVLARVIYGFRISVLFGLILAAVSSVIGVVAGAVQGYFGGWVDLAF QRFIEVWGGIPTLYLIIIISAFIAPGFFVLLGIMLLFSWVALVSVVRAEFLRARNFEYVRAARALGLSNIRIMTVHLLPN AMVATLTFLPFILNGSITTLTSLDFLGFGLPPGSPSLGELLAQGKDNLTAPWLGLTGFLVIAVMLSLLVFAGEAVRDAFD PRKTFA >Mature_406_residues MNEVTRPGDSEVVPAPMPGAQPLVLRSDEGAPPPVPPEAAGRRARLSPLNRRRLDNFRRNRLGYGSFVIFTILFVLSLFA EFIANDRPIVMSYKGEWLVPVLVDYPEEKFGGFLATTDYRSPEIRREIAANGWALWPPIPFSYDTINEDLPTPSPSPPTW MLTDAQCKPVAEKLGGSTCADIPWHWLGTDNTTRDVLARVIYGFRISVLFGLILAAVSSVIGVVAGAVQGYFGGWVDLAF QRFIEVWGGIPTLYLIIIISAFIAPGFFVLLGIMLLFSWVALVSVVRAEFLRARNFEYVRAARALGLSNIRIMTVHLLPN AMVATLTFLPFILNGSITTLTSLDFLGFGLPPGSPSLGELLAQGKDNLTAPWLGLTGFLVIAVMLSLLVFAGEAVRDAFD PRKTFA
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4239
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788505, Length=361, Percent_Identity=58.1717451523546, Blast_Score=401, Evalue=1e-113, Organism=Escherichia coli, GI1787054, Length=221, Percent_Identity=30.316742081448, Blast_Score=112, Evalue=6e-26, Organism=Escherichia coli, GI1787760, Length=223, Percent_Identity=29.1479820627803, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI1787498, Length=221, Percent_Identity=32.579185520362, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI1789964, Length=254, Percent_Identity=32.6771653543307, Blast_Score=101, Evalue=8e-23, Organism=Escherichia coli, GI1789889, Length=223, Percent_Identity=27.3542600896861, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI1787549, Length=218, Percent_Identity=28.4403669724771, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 44515; Mature: 44515
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEVTRPGDSEVVPAPMPGAQPLVLRSDEGAPPPVPPEAAGRRARLSPLNRRRLDNFRRN CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHH RLGYGSFVIFTILFVLSLFAEFIANDRPIVMSYKGEWLVPVLVDYPEEKFGGFLATTDYR CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEHEECCCHHHHCCEEEECCCC SPEIRREIAANGWALWPPIPFSYDTINEDLPTPSPSPPTWMLTDAQCKPVAEKLGGSTCA CHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCCC DIPWHWLGTDNTTRDVLARVIYGFRISVLFGLILAAVSSVIGVVAGAVQGYFGGWVDLAF CCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRFIEVWGGIPTLYLIIIISAFIAPGFFVLLGIMLLFSWVALVSVVRAEFLRARNFEYVR HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH AARALGLSNIRIMTVHLLPNAMVATLTFLPFILNGSITTLTSLDFLGFGLPPGSPSLGEL HHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHH LAQGKDNLTAPWLGLTGFLVIAVMLSLLVFAGEAVRDAFDPRKTFA HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCHHCCC >Mature Secondary Structure MNEVTRPGDSEVVPAPMPGAQPLVLRSDEGAPPPVPPEAAGRRARLSPLNRRRLDNFRRN CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHH RLGYGSFVIFTILFVLSLFAEFIANDRPIVMSYKGEWLVPVLVDYPEEKFGGFLATTDYR CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEHEECCCHHHHCCEEEECCCC SPEIRREIAANGWALWPPIPFSYDTINEDLPTPSPSPPTWMLTDAQCKPVAEKLGGSTCA CHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCCC DIPWHWLGTDNTTRDVLARVIYGFRISVLFGLILAAVSSVIGVVAGAVQGYFGGWVDLAF CCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRFIEVWGGIPTLYLIIIISAFIAPGFFVLLGIMLLFSWVALVSVVRAEFLRARNFEYVR HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH AARALGLSNIRIMTVHLLPNAMVATLTFLPFILNGSITTLTSLDFLGFGLPPGSPSLGEL HHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHH LAQGKDNLTAPWLGLTGFLVIAVMLSLLVFAGEAVRDAFDPRKTFA HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]