| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yhiD [C]
Identifier: 170750699
GI number: 170750699
Start: 4559253
End: 4559963
Strand: Direct
Name: yhiD [C]
Synonym: Mrad2831_4309
Alternate gene names: 170750699
Gene position: 4559253-4559963 (Clockwise)
Preceding gene: 170750689
Following gene: 170750701
Centisome position: 75.01
GC content: 72.43
Gene sequence:
>711_bases ATGACCAGCTACGCCGCCCTCCCCGAAGAACTGAAATCCGCGATCGGCCTGCTCGTGGCCTTCGTGCTGGGCACGATCAT CGGGGCCGAGCGGCAGTACCGGCAGCGCACCGCGGGCCTGCGCACGGCGGTGCTGGTCGCGGTCGGGGCCAGCGCCTTCG TGGATCTCGGCATGCGCCTGACCGGCCCGGACGGGGGCGTCCGCACGGTGGCCTACGTGATCTCGGGCATCGGCTTCCTC GGCGCCGGCGTGATCATGAAGGAGGGCATGAATGTCCGCGGCCTCAACACGGCCGCGACCCTGTGGTGCTCGGCCGCGGT CGGGGCCTTCTGCGGCGCCGACCTGCCCCTGGAGGCGGTGTTCGTGATGGTGACGGTGCTCGCCTGCAACACGGCGCTCC GGCCGCTGGTGAACGCCATCAACCGCGCGCCGATCCGGGAATCCGCCACCGAGGCGACCTACGAGGTCCAGGTCACCACG GCGCCCGGCGAGGCCGGGCCGGCCCAGGACCTGCTGGTGGAGCGCCTGGAGGCCGCGAACTATCCGGTCGGCAGCGTCGA GATCGAGGAGCGCGGCGAGAGCGCGGTCGACGTGGTGGCGACGCTCACGGCCAGCGCCGTGAAGGCCGAGGAGCTCGACG CCGTGACCAACGCGCTGGCCCGCATGCCGGGCATCCGCCACGCCACGTGGTCGGTGCAGACCGCCGACTGA
Upstream 100 bases:
>100_bases GCCCGGTGCGGCCGTCAATCCCGCTTCGGACACGCTTTCCGGTCCCGGCCGGGCCATGGTGTCACGGTTCCGTCACCTCC CCGCTTTCATGAGACGGTGG
Downstream 100 bases:
>100_bases GCGCGGTCGAGGGCCGGCGGGCCGTCCGTCCGCCGGGTGCCCCTCCGGCGGGTGAGGCGGGGCGGTGCCCCGGGGCCGTC AGCGGCGCGGGTCGAGGGGC
Product: MgtC/SapB transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MTSYAALPEELKSAIGLLVAFVLGTIIGAERQYRQRTAGLRTAVLVAVGASAFVDLGMRLTGPDGGVRTVAYVISGIGFL GAGVIMKEGMNVRGLNTAATLWCSAAVGAFCGADLPLEAVFVMVTVLACNTALRPLVNAINRAPIRESATEATYEVQVTT APGEAGPAQDLLVERLEAANYPVGSVEIEERGESAVDVVATLTASAVKAEELDAVTNALARMPGIRHATWSVQTAD
Sequences:
>Translated_236_residues MTSYAALPEELKSAIGLLVAFVLGTIIGAERQYRQRTAGLRTAVLVAVGASAFVDLGMRLTGPDGGVRTVAYVISGIGFL GAGVIMKEGMNVRGLNTAATLWCSAAVGAFCGADLPLEAVFVMVTVLACNTALRPLVNAINRAPIRESATEATYEVQVTT APGEAGPAQDLLVERLEAANYPVGSVEIEERGESAVDVVATLTASAVKAEELDAVTNALARMPGIRHATWSVQTAD >Mature_235_residues TSYAALPEELKSAIGLLVAFVLGTIIGAERQYRQRTAGLRTAVLVAVGASAFVDLGMRLTGPDGGVRTVAYVISGIGFLG AGVIMKEGMNVRGLNTAATLWCSAAVGAFCGADLPLEAVFVMVTVLACNTALRPLVNAINRAPIRESATEATYEVQVTTA PGEAGPAQDLLVERLEAANYPVGSVEIEERGESAVDVVATLTASAVKAEELDAVTNALARMPGIRHATWSVQTAD
Specific function: Unknown
COG id: COG1285
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MgtC/SapB family [H]
Homologues:
Organism=Escherichia coli, GI1789924, Length=190, Percent_Identity=27.3684210526316, Blast_Score=69, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003416 [H]
Pfam domain/function: PF02308 MgtC [H]
EC number: NA
Molecular weight: Translated: 24461; Mature: 24330
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSYAALPEELKSAIGLLVAFVLGTIIGAERQYRQRTAGLRTAVLVAVGASAFVDLGMRL CCCHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE TGPDGGVRTVAYVISGIGFLGAGVIMKEGMNVRGLNTAATLWCSAAVGAFCGADLPLEAV ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH FVMVTVLACNTALRPLVNAINRAPIRESATEATYEVQVTTAPGEAGPAQDLLVERLEAAN HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCC YPVGSVEIEERGESAVDVVATLTASAVKAEELDAVTNALARMPGIRHATWSVQTAD CCCCCEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC >Mature Secondary Structure TSYAALPEELKSAIGLLVAFVLGTIIGAERQYRQRTAGLRTAVLVAVGASAFVDLGMRL CCHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE TGPDGGVRTVAYVISGIGFLGAGVIMKEGMNVRGLNTAATLWCSAAVGAFCGADLPLEAV ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH FVMVTVLACNTALRPLVNAINRAPIRESATEATYEVQVTTAPGEAGPAQDLLVERLEAAN HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCC YPVGSVEIEERGESAVDVVATLTASAVKAEELDAVTNALARMPGIRHATWSVQTAD CCCCCEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]