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The map label for this gene is dnaQ [H]

Identifier: 170750672

GI number: 170750672

Start: 4534144

End: 4534866

Strand: Reverse

Name: dnaQ [H]

Synonym: Mrad2831_4282

Alternate gene names: 170750672

Gene position: 4534866-4534144 (Counterclockwise)

Preceding gene: 170750673

Following gene: 170750671

Centisome position: 74.61

GC content: 71.78

Gene sequence:

>723_bases
ATGCTGCGCGAGATCGTCCTCGACACCGAGACCACCGGCACGGAGGCGAAGGGAGGCGACCGGCTGATCGAGATCGGCGC
GGTGGAGCTCCTCAACCACATCCCCACCGGCCGGACCTTCCACCGCTACTGCAACCCGCAGCGCCCGGTCTCCGAGGGCG
CGTTCAACGTCCACGGCCTGTCCGACGCGTTCCTCGCCGACAAGCCGGTCTTCGCCGAGATCGTCGGCGAGTTGCTGGCG
TTCCTGGCCGACGGGCGGCTCGTCATCCACAACGCGCCCTTCGACGTCGGCTTCCTCAACATGGAATACGCCCGGCTCGG
CGCGAACGCCCCGCCGCCGATCCAGCTGGAGGACGTGGTCGACACCCTGCCGATGGCCCGGCGCAAGCACCCGGGCGCGG
CCAACAACCTCGACGCCCTCTGCGCCCGCTACGGCATCGACAACACCCGGCGGACCAAGCACGGGGCGCTCCTCGACGCG
CAGATCCTGGCCGAGGTCTACGTCGAGCTGCTCGGCGGCAAGCAGACCAGCCTCGGGCTCCTGGAGGCCGAGAAGGCTGC
CCCGGCGGCCGGATCGACCGCCCTGGCGGCGGCCCCGGCGGCACCCCGTCCCTACCGCAGCCGCCTTACGGATGCGGAGC
GCGCCCGCCACGACAGCTTCCGCGCGAGCCTCGGTCCCGCCGCGATCTGGGCCGACTACATCGGCGCGGACGATCCGGTC
TGA

Upstream 100 bases:

>100_bases
CGGCCGACGGGCGATGGACGGGGACGGCCGTGCAGGGCGGGTTAACCGTCCGGGCTTATCCGGCTAGGGTCCGTCCCCAT
CCCCGCGAGCCGCGAGACCC

Downstream 100 bases:

>100_bases
TCCGCCCGCCAGAGCCCCCGCTCCGTGCGCGGCACCGGCTGTTGCCGCATCGCACAGGGGCGTTTAGTGCAATGCACAAA
ACGCCGTCGGCGCACCATCT

Product: DNA polymerase III subunit epsilon

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MLREIVLDTETTGTEAKGGDRLIEIGAVELLNHIPTGRTFHRYCNPQRPVSEGAFNVHGLSDAFLADKPVFAEIVGELLA
FLADGRLVIHNAPFDVGFLNMEYARLGANAPPPIQLEDVVDTLPMARRKHPGAANNLDALCARYGIDNTRRTKHGALLDA
QILAEVYVELLGGKQTSLGLLEAEKAAPAAGSTALAAAPAAPRPYRSRLTDAERARHDSFRASLGPAAIWADYIGADDPV

Sequences:

>Translated_240_residues
MLREIVLDTETTGTEAKGGDRLIEIGAVELLNHIPTGRTFHRYCNPQRPVSEGAFNVHGLSDAFLADKPVFAEIVGELLA
FLADGRLVIHNAPFDVGFLNMEYARLGANAPPPIQLEDVVDTLPMARRKHPGAANNLDALCARYGIDNTRRTKHGALLDA
QILAEVYVELLGGKQTSLGLLEAEKAAPAAGSTALAAAPAAPRPYRSRLTDAERARHDSFRASLGPAAIWADYIGADDPV
>Mature_240_residues
MLREIVLDTETTGTEAKGGDRLIEIGAVELLNHIPTGRTFHRYCNPQRPVSEGAFNVHGLSDAFLADKPVFAEIVGELLA
FLADGRLVIHNAPFDVGFLNMEYARLGANAPPPIQLEDVVDTLPMARRKHPGAANNLDALCARYGIDNTRRTKHGALLDA
QILAEVYVELLGGKQTSLGLLEAEKAAPAAGSTALAAAPAAPRPYRSRLTDAERARHDSFRASLGPAAIWADYIGADDPV

Specific function: DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease [H]

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786409, Length=239, Percent_Identity=45.6066945606695, Blast_Score=195, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006054
- InterPro:   IPR006309
- InterPro:   IPR006055
- InterPro:   IPR013520
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00929 Exonuc_X-T [H]

EC number: =2.7.7.7 [H]

Molecular weight: Translated: 25739; Mature: 25739

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLREIVLDTETTGTEAKGGDRLIEIGAVELLNHIPTGRTFHRYCNPQRPVSEGAFNVHGL
CCCCEEECCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCEEECCC
SDAFLADKPVFAEIVGELLAFLADGRLVIHNAPFDVGFLNMEYARLGANAPPPIQLEDVV
CHHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEHHHHHHCCCCCCCCCHHHHH
DTLPMARRKHPGAANNLDALCARYGIDNTRRTKHGALLDAQILAEVYVELLGGKQTSLGL
HHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHH
LEAEKAAPAAGSTALAAAPAAPRPYRSRLTDAERARHDSFRASLGPAAIWADYIGADDPV
HHHHHCCCCCCCCCEECCCCCCCHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLREIVLDTETTGTEAKGGDRLIEIGAVELLNHIPTGRTFHRYCNPQRPVSEGAFNVHGL
CCCCEEECCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCEEECCC
SDAFLADKPVFAEIVGELLAFLADGRLVIHNAPFDVGFLNMEYARLGANAPPPIQLEDVV
CHHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEHHHHHHCCCCCCCCCHHHHH
DTLPMARRKHPGAANNLDALCARYGIDNTRRTKHGALLDAQILAEVYVELLGGKQTSLGL
HHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHH
LEAEKAAPAAGSTALAAAPAAPRPYRSRLTDAERARHDSFRASLGPAAIWADYIGADDPV
HHHHHCCCCCCCCCEECCCCCCCHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA