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The map label for this gene is yliB [C]

Identifier: 170750641

GI number: 170750641

Start: 4498537

End: 4500108

Strand: Reverse

Name: yliB [C]

Synonym: Mrad2831_4251

Alternate gene names: 170750641

Gene position: 4500108-4498537 (Counterclockwise)

Preceding gene: 170750642

Following gene: 170750640

Centisome position: 74.04

GC content: 70.93

Gene sequence:

>1572_bases
ATGCTGAACAGACGATCCTTCATGGCCCTGTCGGGCGCCGCCCTCGCGGCACCGGCCCTGGCGCAGGGCGGCGCCGCCCG
GACGCTCAAGTTCATCCCGCAGGCCGACCTGACGGTGCTCGATCCGATCTGGACGACCGCCTACGTCACCCGGAACCACG
GGCTCGCCGTCTTCGACACGCTCTACGGCACCGATGCCGGCTACGCCGCCCAGCCGCAGATGGTGGCGGGCCACACGGTG
GAGAACGACGGCAAGCTGTGGCGCCTCACCCTGCGGCCCGGGCTGACCTTCCACGACGGCAGCCCGGTGCTGGCCCGCGA
CTGCGTCGCGAGCGTCGCGCGCTGGGGCAAGCGCGACGCGATGGGCCAGACCCTCATGGCCTACACGGACGAGCTCTCGG
CCCCGGACGACCGGACGATCCAGTTCCGGCTGAAGAAGCCCTTCGCGCTCCTGCCGGACGCGCTGGGCAAGGTCGGCTCC
TCGATCTGCGCCATCATGCCGGAGCGTCTCGCCAGGACCGACCCGTTCACGCAGGTGACCGAGATGGTCGGCAGCGGCCC
GTTCCGCTTCAAGGCGGACGAGCGCGTGGTCGGCGCCCGGGTGGTCTACGAGCGCTTTGCCGGCTACGTCCCCCGCGAGG
GCGGCGAGCCGCAATGGACCTCGGGCCCGAAGCGCGCCTTCGTCGACCAGGTCGAGTGGCACGTCATCCCCGATCAGGCC
ACCGCCGCCTCGGCCATGCAGACGGGCGAGATGGACTGGTGGGAGCAGCCGCCGGCCGATCTCGTCCCGACCCTCGGCGG
CCTGACGACGCGGATCACCGATCCGACCGGCCTGATCGGCTGCCTGCGTATGAACCAGCTCCAGCCGCCCTTCGACAATC
CGGCGATCCGGCAGGTGCTGCTGAAGGTCGTCGACCAGACCGACTTCATGCAGGCGGTGACCGGGACCGATCCCAAGCTG
ATCCACGTGCCGACCGGCTTCTTCTGCCCGGGCCTGCCCATGGCGAGCGATGTCGGCCTCGACGTCCTGACGCGCAAGCG
CGACTACGCGGGCGCCAAGGCGGCGCTGGCGGCGGCGGGCTACAAGGGCGAGAAGGTGGTGCTGATGGGCGCCTCGGACT
TCCCGAGCCTGAAGGCGCTCGCCGACGTGGCGGCCGACATGCTCACCCGCGCCGGCTTCAACGTCGACTACCAGGTCATG
GACTGGGGGTCGGTGGTGCAGCGGCGCGCCAAGAAGGAGCCGGTCGCCCAGGGCGGCTGGAGCGCCTTCTGCACCTTCTG
GGCCGGGCTCGACCAGGCGAATCCGGCGGTCAGCGCCTTCCTGCGCGGGACGGGCCAGAGCGCCGCGATCGGCTGGCCCA
CCAGCGAGAAGATCGAGGCCCTGCGGGACCAGTGGCTGGACGCCCCGGACACCGCCGCGCGCAAGCGGCTCGCGGGCGAG
CTCCAGCAGCAGGCCTTCGTCGACCTGCCCTACCTGCCCCTCGGGCAGTACTTCAACCAGACCTCGTACAAGCCGTCCCT
GACCGGTGTCCTCGACGGCGTGCCGGTGTTCTGGAACGTCAAGAAGGCCTGA

Upstream 100 bases:

>100_bases
GGCGGCGGCACGCTGACCGGCGCGCCCGTGACGCGCCCGTGACGCGCTTGGCCCGCCACGTGCTAACCTCCGCGGGACTG
CAACGCTTGGGCGAGTCGGC

Downstream 100 bases:

>100_bases
GGGCGAGGTCTGTAGGCGGTGCGAGCGGTCGAGAGACGCCCGCGCCGCCCGTCGTTGCGGGCGCAGCGAAGCAGTCCAGC
GGCACCGCGCCCGCGGATGC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MLNRRSFMALSGAALAAPALAQGGAARTLKFIPQADLTVLDPIWTTAYVTRNHGLAVFDTLYGTDAGYAAQPQMVAGHTV
ENDGKLWRLTLRPGLTFHDGSPVLARDCVASVARWGKRDAMGQTLMAYTDELSAPDDRTIQFRLKKPFALLPDALGKVGS
SICAIMPERLARTDPFTQVTEMVGSGPFRFKADERVVGARVVYERFAGYVPREGGEPQWTSGPKRAFVDQVEWHVIPDQA
TAASAMQTGEMDWWEQPPADLVPTLGGLTTRITDPTGLIGCLRMNQLQPPFDNPAIRQVLLKVVDQTDFMQAVTGTDPKL
IHVPTGFFCPGLPMASDVGLDVLTRKRDYAGAKAALAAAGYKGEKVVLMGASDFPSLKALADVAADMLTRAGFNVDYQVM
DWGSVVQRRAKKEPVAQGGWSAFCTFWAGLDQANPAVSAFLRGTGQSAAIGWPTSEKIEALRDQWLDAPDTAARKRLAGE
LQQQAFVDLPYLPLGQYFNQTSYKPSLTGVLDGVPVFWNVKKA

Sequences:

>Translated_523_residues
MLNRRSFMALSGAALAAPALAQGGAARTLKFIPQADLTVLDPIWTTAYVTRNHGLAVFDTLYGTDAGYAAQPQMVAGHTV
ENDGKLWRLTLRPGLTFHDGSPVLARDCVASVARWGKRDAMGQTLMAYTDELSAPDDRTIQFRLKKPFALLPDALGKVGS
SICAIMPERLARTDPFTQVTEMVGSGPFRFKADERVVGARVVYERFAGYVPREGGEPQWTSGPKRAFVDQVEWHVIPDQA
TAASAMQTGEMDWWEQPPADLVPTLGGLTTRITDPTGLIGCLRMNQLQPPFDNPAIRQVLLKVVDQTDFMQAVTGTDPKL
IHVPTGFFCPGLPMASDVGLDVLTRKRDYAGAKAALAAAGYKGEKVVLMGASDFPSLKALADVAADMLTRAGFNVDYQVM
DWGSVVQRRAKKEPVAQGGWSAFCTFWAGLDQANPAVSAFLRGTGQSAAIGWPTSEKIEALRDQWLDAPDTAARKRLAGE
LQQQAFVDLPYLPLGQYFNQTSYKPSLTGVLDGVPVFWNVKKA
>Mature_523_residues
MLNRRSFMALSGAALAAPALAQGGAARTLKFIPQADLTVLDPIWTTAYVTRNHGLAVFDTLYGTDAGYAAQPQMVAGHTV
ENDGKLWRLTLRPGLTFHDGSPVLARDCVASVARWGKRDAMGQTLMAYTDELSAPDDRTIQFRLKKPFALLPDALGKVGS
SICAIMPERLARTDPFTQVTEMVGSGPFRFKADERVVGARVVYERFAGYVPREGGEPQWTSGPKRAFVDQVEWHVIPDQA
TAASAMQTGEMDWWEQPPADLVPTLGGLTTRITDPTGLIGCLRMNQLQPPFDNPAIRQVLLKVVDQTDFMQAVTGTDPKL
IHVPTGFFCPGLPMASDVGLDVLTRKRDYAGAKAALAAAGYKGEKVVLMGASDFPSLKALADVAADMLTRAGFNVDYQVM
DWGSVVQRRAKKEPVAQGGWSAFCTFWAGLDQANPAVSAFLRGTGQSAAIGWPTSEKIEALRDQWLDAPDTAARKRLAGE
LQQQAFVDLPYLPLGQYFNQTSYKPSLTGVLDGVPVFWNVKKA

Specific function: Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787052, Length=501, Percent_Identity=23.3532934131737, Blast_Score=87, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 56783; Mature: 56783

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNRRSFMALSGAALAAPALAQGGAARTLKFIPQADLTVLDPIWTTAYVTRNHGLAVFDT
CCCCCCHHEECCHHHHHHHHHCCCCHHEEEECCCCCCEEECCHHHEEEEECCCCEEEEHH
LYGTDAGYAAQPQMVAGHTVENDGKLWRLTLRPGLTFHDGSPVLARDCVASVARWGKRDA
HHCCCCCCCCCCCEEECCEECCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHCCCHHH
MGQTLMAYTDELSAPDDRTIQFRLKKPFALLPDALGKVGSSICAIMPERLARTDPFTQVT
HCHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
EMVGSGPFRFKADERVVGARVVYERFAGYVPREGGEPQWTSGPKRAFVDQVEWHVIPDQA
HHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCEEEEECCCH
TAASAMQTGEMDWWEQPPADLVPTLGGLTTRITDPTGLIGCLRMNQLQPPFDNPAIRQVL
HHHHHHHCCCCCCCCCCCHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHH
LKVVDQTDFMQAVTGTDPKLIHVPTGFFCPGLPMASDVGLDVLTRKRDYAGAKAALAAAG
HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCHHHCCHHHHHHHCC
YKGEKVVLMGASDFPSLKALADVAADMLTRAGFNVDYQVMDWGSVVQRRAKKEPVAQGGW
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCCCCCCCH
SAFCTFWAGLDQANPAVSAFLRGTGQSAAIGWPTSEKIEALRDQWLDAPDTAARKRLAGE
HHHHHHHHCCCCCCHHHHHHHHCCCCCCEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHH
LQQQAFVDLPYLPLGQYFNQTSYKPSLTGVLDGVPVFWNVKKA
HHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHCCCCEEEEECCC
>Mature Secondary Structure
MLNRRSFMALSGAALAAPALAQGGAARTLKFIPQADLTVLDPIWTTAYVTRNHGLAVFDT
CCCCCCHHEECCHHHHHHHHHCCCCHHEEEECCCCCCEEECCHHHEEEEECCCCEEEEHH
LYGTDAGYAAQPQMVAGHTVENDGKLWRLTLRPGLTFHDGSPVLARDCVASVARWGKRDA
HHCCCCCCCCCCCEEECCEECCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHCCCHHH
MGQTLMAYTDELSAPDDRTIQFRLKKPFALLPDALGKVGSSICAIMPERLARTDPFTQVT
HCHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
EMVGSGPFRFKADERVVGARVVYERFAGYVPREGGEPQWTSGPKRAFVDQVEWHVIPDQA
HHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCEEEEECCCH
TAASAMQTGEMDWWEQPPADLVPTLGGLTTRITDPTGLIGCLRMNQLQPPFDNPAIRQVL
HHHHHHHCCCCCCCCCCCHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHH
LKVVDQTDFMQAVTGTDPKLIHVPTGFFCPGLPMASDVGLDVLTRKRDYAGAKAALAAAG
HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCHHHCCHHHHHHHCC
YKGEKVVLMGASDFPSLKALADVAADMLTRAGFNVDYQVMDWGSVVQRRAKKEPVAQGGW
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCCCCCCCH
SAFCTFWAGLDQANPAVSAFLRGTGQSAAIGWPTSEKIEALRDQWLDAPDTAARKRLAGE
HHHHHHHHCCCCCCHHHHHHHHCCCCCCEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHH
LQQQAFVDLPYLPLGQYFNQTSYKPSLTGVLDGVPVFWNVKKA
HHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]