| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is metQ [H]
Identifier: 170750614
GI number: 170750614
Start: 4474086
End: 4474886
Strand: Direct
Name: metQ [H]
Synonym: Mrad2831_4224
Alternate gene names: 170750614
Gene position: 4474086-4474886 (Clockwise)
Preceding gene: 170750606
Following gene: 170750615
Centisome position: 73.61
GC content: 66.42
Gene sequence:
>801_bases ATGAAGTTCCTGCGTCTCCTCGCCGTCGCGGCGCTCAGCCTCGGCGCCCTGCCGGCCGGGGCGGAGACCCTCAGGATCGG CGTCGTGCCCGGCGCCTACGGCGACGCCGTGACGGTGGCGGCCCGGGAGGCCAAGGCCGAGGGCCTCGACGTGAAGGTGG TCGAGTTCAGCGACTGGACGACGCCCAACGTCGCCCTCGATGCCGGCGACATCGACGTGAACTTCTTCCAGCACCGCCCC TTCATGGAGAATGCCGCCAAGCAGAAGGGCTACGCGTTCGACATCGTCGGGCTCGGGATCCTGTCCAATATCGGCCTGTA CTCCCTGAAGCATAAGGGCTTCGACCAGATCCCGGTGGGCGGCACGGTGGCGATCGCCAACGACCCGGTGAACCAGGGCC GCGGCCTGCTGCTCCTCCAGAAGGCCGGGCTGATCAAGCTGAAGGACGGTGTCGGCTTCCTCGGCACCCTCGACGACGTC GTCGAGAACCCGAAGACACTGCGCTTCACCGAGGTCGAGGGGCCGCAGCTGGCGCGGATCACCGGCGACGTCGACCTCGC CCTCGGCTACCCGCACTTCATCGTGGCGGCCGGCAGTTTCGACCCGACCAGCGGATTGATCTATTCCGGTATCGAGGACC GGCGCTTCGCCGTGAGCTTCGTCACCAAGGCCGCCCGCAAGGAGGACCCCGTGATCCGGAAATTCGTGACGCTCTTCCAG AACTCGGAGGCCGTGAAACAGCAGATCCGCAAGTCCTTCGCCAACAGCGACAAGCTCTACCTGCTGGCGTGGCAGAACTG A
Upstream 100 bases:
>100_bases GTTCCCGCATGCTTCCGGATCTTGCCTTCGGATGCGGAGCGATCCGTCACGGCCCGACCGCCGGACTTGCCCCCGCCCAT TCCCGCCAGAGTCCCGCCCG
Downstream 100 bases:
>100_bases TGGTCGGCCTGATCTTCGACAGCCTGCGCGATCCGGGCACGCCGGCCGCGGCCGGACGGGTAGGCCCGGGCGCGGCGACC GCCGCCCGGGCCCCTGCCGC
Product: NLPA lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MKFLRLLAVAALSLGALPAGAETLRIGVVPGAYGDAVTVAAREAKAEGLDVKVVEFSDWTTPNVALDAGDIDVNFFQHRP FMENAAKQKGYAFDIVGLGILSNIGLYSLKHKGFDQIPVGGTVAIANDPVNQGRGLLLLQKAGLIKLKDGVGFLGTLDDV VENPKTLRFTEVEGPQLARITGDVDLALGYPHFIVAAGSFDPTSGLIYSGIEDRRFAVSFVTKAARKEDPVIRKFVTLFQ NSEAVKQQIRKSFANSDKLYLLAWQN
Sequences:
>Translated_266_residues MKFLRLLAVAALSLGALPAGAETLRIGVVPGAYGDAVTVAAREAKAEGLDVKVVEFSDWTTPNVALDAGDIDVNFFQHRP FMENAAKQKGYAFDIVGLGILSNIGLYSLKHKGFDQIPVGGTVAIANDPVNQGRGLLLLQKAGLIKLKDGVGFLGTLDDV VENPKTLRFTEVEGPQLARITGDVDLALGYPHFIVAAGSFDPTSGLIYSGIEDRRFAVSFVTKAARKEDPVIRKFVTLFQ NSEAVKQQIRKSFANSDKLYLLAWQN >Mature_266_residues MKFLRLLAVAALSLGALPAGAETLRIGVVPGAYGDAVTVAAREAKAEGLDVKVVEFSDWTTPNVALDAGDIDVNFFQHRP FMENAAKQKGYAFDIVGLGILSNIGLYSLKHKGFDQIPVGGTVAIANDPVNQGRGLLLLQKAGLIKLKDGVGFLGTLDDV VENPKTLRFTEVEGPQLARITGDVDLALGYPHFIVAAGSFDPTSGLIYSGIEDRRFAVSFVTKAARKEDPVIRKFVTLFQ NSEAVKQQIRKSFANSDKLYLLAWQN
Specific function: This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system [H]
COG id: COG1464
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nlpA lipoprotein family [H]
Homologues:
Organism=Escherichia coli, GI1786396, Length=251, Percent_Identity=41.0358565737052, Blast_Score=167, Evalue=7e-43, Organism=Escherichia coli, GI1790093, Length=233, Percent_Identity=39.0557939914163, Blast_Score=144, Evalue=7e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004872 - InterPro: IPR004478 [H]
Pfam domain/function: PF03180 Lipoprotein_9 [H]
EC number: NA
Molecular weight: Translated: 28678; Mature: 28678
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFLRLLAVAALSLGALPAGAETLRIGVVPGAYGDAVTVAAREAKAEGLDVKVVEFSDWT CHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEEHHHCCCCCEEEEEEECCCC TPNVALDAGDIDVNFFQHRPFMENAAKQKGYAFDIVGLGILSNIGLYSLKHKGFDQIPVG CCCEEEECCCCEEEEEECCCHHHHHHHHCCCEEEEEHHHHHHCCCEEEECCCCCCCCCCC GTVAIANDPVNQGRGLLLLQKAGLIKLKDGVGFLGTLDDVVENPKTLRFTEVEGPQLARI CEEEEECCCCCCCCCEEEEECCCEEEEECCCCCEECHHHHHCCCCEEEEEECCCCEEEEE TGDVDLALGYPHFIVAAGSFDPTSGLIYSGIEDRRFAVSFVTKAARKEDPVIRKFVTLFQ ECCEEEEECCCEEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHC NSEAVKQQIRKSFANSDKLYLLAWQN CCHHHHHHHHHHHCCCCCEEEEEECC >Mature Secondary Structure MKFLRLLAVAALSLGALPAGAETLRIGVVPGAYGDAVTVAAREAKAEGLDVKVVEFSDWT CHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEEHHHCCCCCEEEEEEECCCC TPNVALDAGDIDVNFFQHRPFMENAAKQKGYAFDIVGLGILSNIGLYSLKHKGFDQIPVG CCCEEEECCCCEEEEEECCCHHHHHHHHCCCEEEEEHHHHHHCCCEEEECCCCCCCCCCC GTVAIANDPVNQGRGLLLLQKAGLIKLKDGVGFLGTLDDVVENPKTLRFTEVEGPQLARI CEEEEECCCCCCCCCEEEEECCCEEEEECCCCCEECHHHHHCCCCEEEEEECCCCEEEEE TGDVDLALGYPHFIVAAGSFDPTSGLIYSGIEDRRFAVSFVTKAARKEDPVIRKFVTLFQ ECCEEEEECCCEEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHC NSEAVKQQIRKSFANSDKLYLLAWQN CCHHHHHHHHHHHCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]