Click here to switch to the map view.

The map label for this gene is 170750563

Identifier: 170750563

GI number: 170750563

Start: 4426238

End: 4426792

Strand: Direct

Name: 170750563

Synonym: Mrad2831_4171

Alternate gene names: NA

Gene position: 4426238-4426792 (Clockwise)

Preceding gene: 170750559

Following gene: 170750564

Centisome position: 72.83

GC content: 65.95

Gene sequence:

>555_bases
ATGATCTTCGTTACGAGGGCGGACGGCGGCGTGACCTACGTCAGCCCGGAGTGGACCGCGTTCACCGGCCAAGCCGCCAC
GGCAGCCGCCGAACTGGGCTGGCTCACCTGCATCCATCCTGAGGATTACGGGGCCGCCGTCACCTTCCTGCGCACCGCCT
GTGATCAGCAGAGCGAATACAGCCTGCGCCTCCGCCTGCGTCGTGCGGATGGCAGCTACGCCTGGGTGATGATTGGCGCC
GTCCCCTCCTATGGACCGCCGGGCCACACCTTCCTGGGTTATCTGGGATCACTCACAGAGATCACCCCGACCGGTTCTGA
ACCCATCGGTGCCTACGGAACGCTCGCACGCTTCGTCCCGCCGCCCATGCATCCGGCAACGCCGCCCGGTTCGACGCTGG
AGGCGGTCGCCGACCATCTGCTGATCGCGCACGGGCTGATCGAACAGGACCACGCCAAGGAGATGCTGCCGATATTGCGG
CAGGCGTTGATGGTGGCCGGCGTTCTGCTGGCGCGCAAGATGATCTCGCCTGATGGCAGCGACCGCTTCCACTGA

Upstream 100 bases:

>100_bases
GGTTGAATTATACTGATGTCGCCCTCGTTAGGCTCACCAGTCTCGGCGTCGACGTGCGGCCTTCGATGGCGCCGAACAAT
CGGAGCTGGGGGCGTTTCAG

Downstream 100 bases:

>100_bases
GACTTGCATCGGTGTGGCCAGACTCGAAGGCGAACGGCTTGGCGTTCTCGTCCTTCAGGTAGGCGGTCGCCGCCGCCGCG
ATCTCGTCGTCCGTCACCTC

Product: PAS domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MIFVTRADGGVTYVSPEWTAFTGQAATAAAELGWLTCIHPEDYGAAVTFLRTACDQQSEYSLRLRLRRADGSYAWVMIGA
VPSYGPPGHTFLGYLGSLTEITPTGSEPIGAYGTLARFVPPPMHPATPPGSTLEAVADHLLIAHGLIEQDHAKEMLPILR
QALMVAGVLLARKMISPDGSDRFH

Sequences:

>Translated_184_residues
MIFVTRADGGVTYVSPEWTAFTGQAATAAAELGWLTCIHPEDYGAAVTFLRTACDQQSEYSLRLRLRRADGSYAWVMIGA
VPSYGPPGHTFLGYLGSLTEITPTGSEPIGAYGTLARFVPPPMHPATPPGSTLEAVADHLLIAHGLIEQDHAKEMLPILR
QALMVAGVLLARKMISPDGSDRFH
>Mature_184_residues
MIFVTRADGGVTYVSPEWTAFTGQAATAAAELGWLTCIHPEDYGAAVTFLRTACDQQSEYSLRLRLRRADGSYAWVMIGA
VPSYGPPGHTFLGYLGSLTEITPTGSEPIGAYGTLARFVPPPMHPATPPGSTLEAVADHLLIAHGLIEQDHAKEMLPILR
QALMVAGVLLARKMISPDGSDRFH

Specific function: Unknown

COG id: COG2202

COG function: function code T; FOG: PAS/PAC domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 19763; Mature: 19763

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFVTRADGGVTYVSPEWTAFTGQAATAAAELGWLTCIHPEDYGAAVTFLRTACDQQSEY
CEEEEECCCCEEEECCCCEEECCCHHHHHHHHCEEEEECCCCCCHHHHHHHHHHCCCCCE
SLRLRLRRADGSYAWVMIGAVPSYGPPGHTFLGYLGSLTEITPTGSEPIGAYGTLARFVP
EEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCC
PPMHPATPPGSTLEAVADHLLIAHGLIEQDHAKEMLPILRQALMVAGVLLARKMISPDGS
CCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DRFH
CCCC
>Mature Secondary Structure
MIFVTRADGGVTYVSPEWTAFTGQAATAAAELGWLTCIHPEDYGAAVTFLRTACDQQSEY
CEEEEECCCCEEEECCCCEEECCCHHHHHHHHCEEEEECCCCCCHHHHHHHHHHCCCCCE
SLRLRLRRADGSYAWVMIGAVPSYGPPGHTFLGYLGSLTEITPTGSEPIGAYGTLARFVP
EEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCC
PPMHPATPPGSTLEAVADHLLIAHGLIEQDHAKEMLPILRQALMVAGVLLARKMISPDGS
CCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DRFH
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]