| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yagR [C]
Identifier: 170750331
GI number: 170750331
Start: 4185478
End: 4187808
Strand: Direct
Name: yagR [C]
Synonym: Mrad2831_3934
Alternate gene names: 170750331
Gene position: 4185478-4187808 (Clockwise)
Preceding gene: 170750330
Following gene: 170750332
Centisome position: 68.86
GC content: 70.83
Gene sequence:
>2331_bases GTGATCCACGACGCCAAGCTGAGCGCCGAGCGCGCCGCCGGCACCAGGCCGGCCCTCGACAACGTCAGCCGCCGCGGCAT CCTCGGCGGCGCCGGCGCCCTGGTTCTGGCCCTCTCGCTGCGCCCCGCCCGGGCCGACGAGACCCAGACCCAGGAGCAGA AGGAGCAGAAGTTCGGCGCCGACGGCATGCCGCACGGCTGGCGCGACGATCCGAAGATCTTCGTCGCCATCGCGCCGGAC GGCACCGTCACGGTGACCAACCACCGCTCCGACATGGGCCAGGGCATCCGCACCTCTGTGGCCTTCACGGTCGCCGACGA GCTGGAGGCCGACTGGTCGAAGGTGAAGGTGGTCCAGGCCTGGGGCGACGAGACCCGCTTCGGCAACCAGGACACGGACG GCTCGCGCTCGACCCGCCACTTCTTCCAGCACTTCCGCCACGCCGGCGCCGCCGCGCGGCTGATGCTGATCCAGGCGGCG GCCAAGCAGTGGGGCGTGCCGGCCTCCGAGGTCACGGCCGTCAACCACACGCTGACCCACGCCAAGTCCGGCCGCACCCT CGGCTACGGCGCGGTCGCCCAGGCCGCCGCCGAGCTGCCGGTGCCCACCGACGTCAAGCTGAAGGACCCGAAGGACTTCC GCTACATCGGCACCGGCAAGATCGGGCTGATCGACAACTTCGACATCACCACCGGCAAGGCCGTCTACGGCCTCGACACC AAGCTCGACGGGATGCTCTACGCGGTCGTCGCGCGCCCGGCCGTCTACGGCGGCAAGGTGAAGTCGTTCGACGACGGCGA GGCCAAGAAGGTCCCGGGCGTCGTGAAGATCTTCAAGATCGACGGCGGCGAGATCCCGTCCGAGTTCATGCCGCTCGGCG GCGTGGCGGTCGTGGCCAAGAACACGTGGGCGGCCATGAAGGCTCGGGACGCCCTCAAGATCACCTGGGACGACGGCCCG AACGCCGGCTACGACACCGACGCGTTCCGCAAGGAGCTGGAGGCCGCGGCCCGCAAGCCCGGCAAGGTCGTGCGCACGCA GGGCGACGTCGACGGCGCCCTGGCCAAGGCCAAGACCAAGGTCCAGGCCGAGTACTTCGTGCCCCACCTCGCCCAGGCGC CGATGGAGCCCCCGGCGGCGGTGGCCCGCGTGAAGGACGGGTTCTGCGAGGCCTGGGCCTGCGTCCAGGGTCCGCAGGCG GCCAACGACCGCCTGATGAAGGCGCTCAAGCTGCCCGACGACAAGGTCAAGGTGAACGTCACGCTGCTCGGCGGCGGCTT CGGCCGCAAGTCCAAGCCCGACTACGTGGTCGAGGCGGCGCTCTGCTCGCAGGCCGTCGGCGGCGCGCCGGTGAAGCTCG CCTGGACCCGCGAGGACGACCTCCACCACGGCTTCTACCACACGATCTCGGTGGAGCACCTGGAGGCCGGCCTCGACGAC AAGGGCATGCCGGTGGCGTGGCTGCACCGCTCGGTGGCGCCGACGATCGGCTCGATCTTCGCGCCGGACCCGAAGCACGA GCTGCCGTTCGAGCTCGGGATGGGGCTGGTCAACACGCCGCTCAACATCCCGAACATGCGGCTCGAGAACCCCGAGGCCG CCGCCCATGTCCGCATCGGCTGGTTCCGCTCGGTGTCGAACATCCCGCACGCCTTCGCGATCCAGTCCTTCGTGTCGGAG CTGGCGCACGCCGCCGGCCGCGAGCCGAAGGAGTACCTGCTGGAGCTGATCGGTCCCGACCGGAAGATCAGCCCGACCGA GATCGGCGACGTCTGGAACTACGGCGAGGATCCGAAGCGCTACCCGATCGAGACCGGCCGCCTGCGCGGCGTGATCGAGG CGGCCGCCAAGGGCGCGGGCTGGGGGCGTCAGATGCCCAAGGGCACCGGCCTGGGCATCGCCGGCCACTACAGCTTCGTC ACCTACACGGCGGTGGCGGCCGAGGTGGAGGTCGACGACAAGGGCCAGGTCCAGGTGAAGGCGATCGACATCGCGGTCGA TTGCGGGCCGCAGGTGAACCCGGAGCGCATCCGCTCGCAGATGGAGGGCGCGGTGGTCATGGGGATGGGGCTCGCCCTCA CCTCCGAGATCACCTTCAAGCAGGGCCGCGCGGTTCAGAACAACTTCGACGGCTACGAGGTCCTCCGGATCGACGCCGCC CCGAAGGTGGTCCGCGTGCACCTCGTGCCGACCGGCAGCTACGACGGGCCGCTCGGCGGCGTCGGCGAGCCCGGCGTGCC GCCGGTGGCGCCGGCCATCGCCAACGCGATCTTCGCGGCCACTGGCCGCCGGGTCCGGCAATTGCCGATCCGCGATCAGC TGAGCGCCTGA
Upstream 100 bases:
>100_bases TGAGCGGCAACATCTGCCGCTGCGGCACCTACCCGCGCATCCGCGCCGCGATCCATCAGGCCGCCGGCCAGCCGGCGCCC GCCAGCAAGGGAGAGCGCCT
Downstream 100 bases:
>100_bases ACCGTCACCCGTCGCGAGACGTTGGGGCCGTGGGGGAACCCGCGGCCCCATGTTTTGGAAAGCACCCGACCCGATGATGC GTCCCGCCCTCACGGCCTGC
Product: molybdopterin binding aldehyde oxidase and xanthine dehydrogenase
Products: NA
Alternate protein names: ALDH [H]
Number of amino acids: Translated: 776; Mature: 776
Protein sequence:
>776_residues MIHDAKLSAERAAGTRPALDNVSRRGILGGAGALVLALSLRPARADETQTQEQKEQKFGADGMPHGWRDDPKIFVAIAPD GTVTVTNHRSDMGQGIRTSVAFTVADELEADWSKVKVVQAWGDETRFGNQDTDGSRSTRHFFQHFRHAGAAARLMLIQAA AKQWGVPASEVTAVNHTLTHAKSGRTLGYGAVAQAAAELPVPTDVKLKDPKDFRYIGTGKIGLIDNFDITTGKAVYGLDT KLDGMLYAVVARPAVYGGKVKSFDDGEAKKVPGVVKIFKIDGGEIPSEFMPLGGVAVVAKNTWAAMKARDALKITWDDGP NAGYDTDAFRKELEAAARKPGKVVRTQGDVDGALAKAKTKVQAEYFVPHLAQAPMEPPAAVARVKDGFCEAWACVQGPQA ANDRLMKALKLPDDKVKVNVTLLGGGFGRKSKPDYVVEAALCSQAVGGAPVKLAWTREDDLHHGFYHTISVEHLEAGLDD KGMPVAWLHRSVAPTIGSIFAPDPKHELPFELGMGLVNTPLNIPNMRLENPEAAAHVRIGWFRSVSNIPHAFAIQSFVSE LAHAAGREPKEYLLELIGPDRKISPTEIGDVWNYGEDPKRYPIETGRLRGVIEAAAKGAGWGRQMPKGTGLGIAGHYSFV TYTAVAAEVEVDDKGQVQVKAIDIAVDCGPQVNPERIRSQMEGAVVMGMGLALTSEITFKQGRAVQNNFDGYEVLRIDAA PKVVRVHLVPTGSYDGPLGGVGEPGVPPVAPAIANAIFAATGRRVRQLPIRDQLSA
Sequences:
>Translated_776_residues MIHDAKLSAERAAGTRPALDNVSRRGILGGAGALVLALSLRPARADETQTQEQKEQKFGADGMPHGWRDDPKIFVAIAPD GTVTVTNHRSDMGQGIRTSVAFTVADELEADWSKVKVVQAWGDETRFGNQDTDGSRSTRHFFQHFRHAGAAARLMLIQAA AKQWGVPASEVTAVNHTLTHAKSGRTLGYGAVAQAAAELPVPTDVKLKDPKDFRYIGTGKIGLIDNFDITTGKAVYGLDT KLDGMLYAVVARPAVYGGKVKSFDDGEAKKVPGVVKIFKIDGGEIPSEFMPLGGVAVVAKNTWAAMKARDALKITWDDGP NAGYDTDAFRKELEAAARKPGKVVRTQGDVDGALAKAKTKVQAEYFVPHLAQAPMEPPAAVARVKDGFCEAWACVQGPQA ANDRLMKALKLPDDKVKVNVTLLGGGFGRKSKPDYVVEAALCSQAVGGAPVKLAWTREDDLHHGFYHTISVEHLEAGLDD KGMPVAWLHRSVAPTIGSIFAPDPKHELPFELGMGLVNTPLNIPNMRLENPEAAAHVRIGWFRSVSNIPHAFAIQSFVSE LAHAAGREPKEYLLELIGPDRKISPTEIGDVWNYGEDPKRYPIETGRLRGVIEAAAKGAGWGRQMPKGTGLGIAGHYSFV TYTAVAAEVEVDDKGQVQVKAIDIAVDCGPQVNPERIRSQMEGAVVMGMGLALTSEITFKQGRAVQNNFDGYEVLRIDAA PKVVRVHLVPTGSYDGPLGGVGEPGVPPVAPAIANAIFAATGRRVRQLPIRDQLSA >Mature_776_residues MIHDAKLSAERAAGTRPALDNVSRRGILGGAGALVLALSLRPARADETQTQEQKEQKFGADGMPHGWRDDPKIFVAIAPD GTVTVTNHRSDMGQGIRTSVAFTVADELEADWSKVKVVQAWGDETRFGNQDTDGSRSTRHFFQHFRHAGAAARLMLIQAA AKQWGVPASEVTAVNHTLTHAKSGRTLGYGAVAQAAAELPVPTDVKLKDPKDFRYIGTGKIGLIDNFDITTGKAVYGLDT KLDGMLYAVVARPAVYGGKVKSFDDGEAKKVPGVVKIFKIDGGEIPSEFMPLGGVAVVAKNTWAAMKARDALKITWDDGP NAGYDTDAFRKELEAAARKPGKVVRTQGDVDGALAKAKTKVQAEYFVPHLAQAPMEPPAAVARVKDGFCEAWACVQGPQA ANDRLMKALKLPDDKVKVNVTLLGGGFGRKSKPDYVVEAALCSQAVGGAPVKLAWTREDDLHHGFYHTISVEHLEAGLDD KGMPVAWLHRSVAPTIGSIFAPDPKHELPFELGMGLVNTPLNIPNMRLENPEAAAHVRIGWFRSVSNIPHAFAIQSFVSE LAHAAGREPKEYLLELIGPDRKISPTEIGDVWNYGEDPKRYPIETGRLRGVIEAAAKGAGWGRQMPKGTGLGIAGHYSFV TYTAVAAEVEVDDKGQVQVKAIDIAVDCGPQVNPERIRSQMEGAVVMGMGLALTSEITFKQGRAVQNNFDGYEVLRIDAA PKVVRVHLVPTGSYDGPLGGVGEPGVPPVAPAIANAIFAATGRRVRQLPIRDQLSA
Specific function: Unknown
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786478, Length=143, Percent_Identity=37.0629370629371, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI1789246, Length=154, Percent_Identity=33.7662337662338, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.3 [H]
Molecular weight: Translated: 83214; Mature: 83214
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHDAKLSAERAAGTRPALDNVSRRGILGGAGALVLALSLRPARADETQTQEQKEQKFGA CCCCCCCCHHHHCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCC DGMPHGWRDDPKIFVAIAPDGTVTVTNHRSDMGQGIRTSVAFTVADELEADWSKVKVVQA CCCCCCCCCCCEEEEEECCCCEEEEECCCHHHCCCCCCEEEEEEHHHHHCCHHHEEEEEE WGDETRFGNQDTDGSRSTRHFFQHFRHAGAAARLMLIQAAAKQWGVPASEVTAVNHTLTH CCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH AKSGRTLGYGAVAQAAAELPVPTDVKLKDPKDFRYIGTGKIGLIDNFDITTGKAVYGLDT CCCCCCCCCHHHHHHHHCCCCCCCCEECCCCCEEEECCCCEEEEECCCCCCCCEEEECCC KLDGMLYAVVARPAVYGGKVKSFDDGEAKKVPGVVKIFKIDGGEIPSEFMPLGGVAVVAK CCCCEEEEEHHCCHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHCCCCCEEEEEC NTWAAMKARDALKITWDDGPNAGYDTDAFRKELEAAARKPGKVVRTQGDVDGALAKAKTK CCHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHH VQAEYFVPHLAQAPMEPPAAVARVKDGFCEAWACVQGPQAANDRLMKALKLPDDKVKVNV HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEE TLLGGGFGRKSKPDYVVEAALCSQAVGGAPVKLAWTREDDLHHGFYHTISVEHLEAGLDD EEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEHHHHHCCCCC KGMPVAWLHRSVAPTIGSIFAPDPKHELPFELGMGLVNTPLNIPNMRLENPEAAAHVRIG CCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCEECCCCCCCCCEECCCCCCEEEEEE WFRSVSNIPHAFAIQSFVSELAHAAGREPKEYLLELIGPDRKISPTEIGDVWNYGEDPKR EHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCC YPIETGRLRGVIEAAAKGAGWGRQMPKGTGLGIAGHYSFVTYTAVAAEVEVDDKGQVQVK CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHHHEEEEEEEEEEEECCCCCEEEE AIDIAVDCGPQVNPERIRSQMEGAVVMGMGLALTSEITFKQGRAVQNNFDGYEVLRIDAA EEEEEEECCCCCCHHHHHHHHCCEEEEECCEEEECCCHHCCCCCHHCCCCCEEEEEEECC PKVVRVHLVPTGSYDGPLGGVGEPGVPPVAPAIANAIFAATGRRVRQLPIRDQLSA CEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHEECCCHHHCCC >Mature Secondary Structure MIHDAKLSAERAAGTRPALDNVSRRGILGGAGALVLALSLRPARADETQTQEQKEQKFGA CCCCCCCCHHHHCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCC DGMPHGWRDDPKIFVAIAPDGTVTVTNHRSDMGQGIRTSVAFTVADELEADWSKVKVVQA CCCCCCCCCCCEEEEEECCCCEEEEECCCHHHCCCCCCEEEEEEHHHHHCCHHHEEEEEE WGDETRFGNQDTDGSRSTRHFFQHFRHAGAAARLMLIQAAAKQWGVPASEVTAVNHTLTH CCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH AKSGRTLGYGAVAQAAAELPVPTDVKLKDPKDFRYIGTGKIGLIDNFDITTGKAVYGLDT CCCCCCCCCHHHHHHHHCCCCCCCCEECCCCCEEEECCCCEEEEECCCCCCCCEEEECCC KLDGMLYAVVARPAVYGGKVKSFDDGEAKKVPGVVKIFKIDGGEIPSEFMPLGGVAVVAK CCCCEEEEEHHCCHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHCCCCCEEEEEC NTWAAMKARDALKITWDDGPNAGYDTDAFRKELEAAARKPGKVVRTQGDVDGALAKAKTK CCHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHH VQAEYFVPHLAQAPMEPPAAVARVKDGFCEAWACVQGPQAANDRLMKALKLPDDKVKVNV HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEE TLLGGGFGRKSKPDYVVEAALCSQAVGGAPVKLAWTREDDLHHGFYHTISVEHLEAGLDD EEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEHHHHHCCCCC KGMPVAWLHRSVAPTIGSIFAPDPKHELPFELGMGLVNTPLNIPNMRLENPEAAAHVRIG CCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCEECCCCCCCCCEECCCCCCEEEEEE WFRSVSNIPHAFAIQSFVSELAHAAGREPKEYLLELIGPDRKISPTEIGDVWNYGEDPKR EHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCC YPIETGRLRGVIEAAAKGAGWGRQMPKGTGLGIAGHYSFVTYTAVAAEVEVDDKGQVQVK CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHHHEEEEEEEEEEEECCCCCEEEE AIDIAVDCGPQVNPERIRSQMEGAVVMGMGLALTSEITFKQGRAVQNNFDGYEVLRIDAA EEEEEEECCCCCCHHHHHHHHCCEEEEECCEEEECCCHHCCCCCHHCCCCCEEEEEEECC PKVVRVHLVPTGSYDGPLGGVGEPGVPPVAPAIANAIFAATGRRVRQLPIRDQLSA CEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHEECCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2606906 [H]