| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750312
Identifier: 170750312
GI number: 170750312
Start: 4165888
End: 4166367
Strand: Reverse
Name: 170750312
Synonym: Mrad2831_3915
Alternate gene names: NA
Gene position: 4166367-4165888 (Counterclockwise)
Preceding gene: 170750313
Following gene: 170750311
Centisome position: 68.55
GC content: 69.38
Gene sequence:
>480_bases ATGATCCAGGTCGGCGACCACCTGCCCCAGGCCACCTTCCGGGTGATCGGCCCCGAGGGCCCGATCGCGCGCACCACCGA CGACGTGTTCAAGGGCCGGCGCGTGGTCCTGATCGGCGTGCCGGGCGCGTTCACCCCCAGCTGCCACCGCAACCACCTGC CGGGCTTCGTCACCCACAGGGACGAGATCCTCGGGCGGGGCATCGACGCCATCGCGGTGACGAGCGTCAACGACGTGTTC GTGCTCGACGCGTGGTCGAAGGCGAGCGGCGCCGAGGGGCTGGAATTCCTCGCCGACGGCAACGCCGATTTCGCCAAGGC CATCGGCCTGGAGATGGACGGCACGGGCTTCGGTCTCGGGATGCGCTCGAAGCGCTACTCGATGCTGGTCGAGGACGGCG TCGTCCGGATCCTCAACGTCGAGGAGACGCCCTCGAAGGCCGAGGTTTCCGGGGCCGAGGCCCTGCTGAAGGTCCTCTGA
Upstream 100 bases:
>100_bases CGCAGGCTGCTCCCGATCCTCGACAGGCACCCCCTGCCACGCTAGGTCAGGCGCGCTGCTCACGCGCGCCATCCCAGCGC GCGACAACGAGGGACCCGCG
Downstream 100 bases:
>100_bases GCGCGCCGCGCGCCGCAGGGCGGCCCTCTTAAGGCCACGTTCCGTCCGCTTGTGTCGCCGGGCTCTGCCCGGAGACCGGC CCGAGGACCGCATGGCCTTC
Product: redoxin domain-containing protein
Products: NA
Alternate protein names: Thioredoxin reductase [H]
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MIQVGDHLPQATFRVIGPEGPIARTTDDVFKGRRVVLIGVPGAFTPSCHRNHLPGFVTHRDEILGRGIDAIAVTSVNDVF VLDAWSKASGAEGLEFLADGNADFAKAIGLEMDGTGFGLGMRSKRYSMLVEDGVVRILNVEETPSKAEVSGAEALLKVL
Sequences:
>Translated_159_residues MIQVGDHLPQATFRVIGPEGPIARTTDDVFKGRRVVLIGVPGAFTPSCHRNHLPGFVTHRDEILGRGIDAIAVTSVNDVF VLDAWSKASGAEGLEFLADGNADFAKAIGLEMDGTGFGLGMRSKRYSMLVEDGVVRILNVEETPSKAEVSGAEALLKVL >Mature_159_residues MIQVGDHLPQATFRVIGPEGPIARTTDDVFKGRRVVLIGVPGAFTPSCHRNHLPGFVTHRDEILGRGIDAIAVTSVNDVF VLDAWSKASGAEGLEFLADGNADFAKAIGLEMDGTGFGLGMRSKRYSMLVEDGVVRILNVEETPSKAEVSGAEALLKVL
Specific function: Unknown
COG id: COG0678
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutaredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI6912238, Length=143, Percent_Identity=41.2587412587413, Blast_Score=106, Evalue=7e-24, Organism=Saccharomyces cerevisiae, GI6323138, Length=133, Percent_Identity=31.5789473684211, Blast_Score=80, Evalue=1e-16, Organism=Drosophila melanogaster, GI78706776, Length=143, Percent_Identity=46.1538461538462, Blast_Score=121, Evalue=2e-28, Organism=Drosophila melanogaster, GI78709078, Length=143, Percent_Identity=46.1538461538462, Blast_Score=121, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011767 - InterPro: IPR002109 - InterPro: IPR011906 - InterPro: IPR014025 - InterPro: IPR013740 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00462 Glutaredoxin; PF08534 Redoxin [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 16946; Mature: 16946
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQVGDHLPQATFRVIGPEGPIARTTDDVFKGRRVVLIGVPGAFTPSCHRNHLPGFVTHR CCCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEECH DEILGRGIDAIAVTSVNDVFVLDAWSKASGAEGLEFLADGNADFAKAIGLEMDGTGFGLG HHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCHHHHCCCEECCCCCCCC MRSKRYSMLVEDGVVRILNVEETPSKAEVSGAEALLKVL CCCCHHHEEECCCEEEEEECCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MIQVGDHLPQATFRVIGPEGPIARTTDDVFKGRRVVLIGVPGAFTPSCHRNHLPGFVTHR CCCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEECH DEILGRGIDAIAVTSVNDVFVLDAWSKASGAEGLEFLADGNADFAKAIGLEMDGTGFGLG HHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCHHHHCCCEECCCCCCCC MRSKRYSMLVEDGVVRILNVEETPSKAEVSGAEALLKVL CCCCHHHEEECCCEEEEEECCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]