| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is phnI [H]
Identifier: 170750253
GI number: 170750253
Start: 4104923
End: 4106029
Strand: Reverse
Name: phnI [H]
Synonym: Mrad2831_3855
Alternate gene names: 170750253
Gene position: 4106029-4104923 (Counterclockwise)
Preceding gene: 170750254
Following gene: 170750252
Centisome position: 67.56
GC content: 73.26
Gene sequence:
>1107_bases ATGTACGTGGCCGTGAAGGGCGGCGAGGCCGCCATCGACAACGCCCACCGGCTCCTCGCCGAGACGCGCCGGGGCGACCC CGCATTGCCCGAACTCTCCGTGGCGCAGATCCGGGAGCAGATGGCGCTGCTCGTCGACCGGGTCATGACCGAGGGCTCGC TCTACGATCCGGACCTCGCGGCGCTGGCGCTGAAGCAGGCGCGGGGCGACGTGGTCGAGGCGGTGTTCCTCGTCCGCGCC TATCGGACGACGCTGCCGCGCTTCGGCGCCTCCGCGCCGGTCGACACCGGGGCCATGGCGGTCGAGCGCCGGATCTCCGC GACCTTCAAGGACCTTCCGGGCGGGCAGGTGCTCGGGCCGACCTTCGACTACACCCACCGGCTGGTCGACTTCGCGCTCG CCGCCGAGACCGCGTCCGAGCCCGCCGCCGAGGCCGAGCCGCGCCCCGATGCCGGCACCTGCCCGCGGGTCACCGACCTG CTGGCCCGGGACGGCCTGATCGAGCCCTCGCCCCCGGAGGACGGCGCCCCCGCGGGCGACCTCACCCGCGAGCCGGTGGA TTATCCCGCCGACCGGGCCCTGCGCCTCCAGGCGCTCGCCCGGGGCGACGAGGGCTTCGTGCTCGGCCTCGCCTACTCGA CGCAGCGCGGCTACGGCCGCACCCACCCGTTCGTCGGCGAGATCCGGGTCGGCGAGGTCGCGGTCGAGTTCGTGCCCGAG GAGCTGGGCTTCGCGGTGCCGCTCGGCCGCGTGCGGCTCACCGAGTGCCAGATGGTCAACCAGTTCAAGGGCACGGGGAC GGCGCCGCCGCAATTCACCCGCGGCTACGGGCTGAGCTTCGGGCAGAGCGAGCGCAAGGCCATGGCGATGGCGCTCGTGG ATCGGGCGCTGCGCGCGGAGGAGCTGGGCGAGCCGGTGGCGAGCCCGGCCCAGGACCAGGAATTCGTCCTGGCCCACTGC GACAGTCTCCAGGCGACCGGCTTTGTGGAGCACCTGAAGCTGCCCCACTACGTCGATTTCCAGGCCGAGCTGGAACTTGT TCGCCGGCTACGCGCCGAGTTCGAGCGCGCGTCCGACGCCGTCGAGATGCAGGAGGCCGCCGAATGA
Upstream 100 bases:
>100_bases GAACCGCGCCGGCTTTCCCCTGGGCGTCGACCTGATCCTCACCGCGCCCGGCCGCGTGGCCGGTCTCCCGCGCTCCACGA CGGTCACGGAGGCCTGACCC
Downstream 100 bases:
>100_bases GCGCCGCGATCGCGCACCGCCCGGAGAGCGAACCGGGCTACAACTTCGCCTATCTCGACGAGGGCACGAAGCGGATGATC CGCCGGGCCATCCTCAAGGC
Product: phosphonate metabolism
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MYVAVKGGEAAIDNAHRLLAETRRGDPALPELSVAQIREQMALLVDRVMTEGSLYDPDLAALALKQARGDVVEAVFLVRA YRTTLPRFGASAPVDTGAMAVERRISATFKDLPGGQVLGPTFDYTHRLVDFALAAETASEPAAEAEPRPDAGTCPRVTDL LARDGLIEPSPPEDGAPAGDLTREPVDYPADRALRLQALARGDEGFVLGLAYSTQRGYGRTHPFVGEIRVGEVAVEFVPE ELGFAVPLGRVRLTECQMVNQFKGTGTAPPQFTRGYGLSFGQSERKAMAMALVDRALRAEELGEPVASPAQDQEFVLAHC DSLQATGFVEHLKLPHYVDFQAELELVRRLRAEFERASDAVEMQEAAE
Sequences:
>Translated_368_residues MYVAVKGGEAAIDNAHRLLAETRRGDPALPELSVAQIREQMALLVDRVMTEGSLYDPDLAALALKQARGDVVEAVFLVRA YRTTLPRFGASAPVDTGAMAVERRISATFKDLPGGQVLGPTFDYTHRLVDFALAAETASEPAAEAEPRPDAGTCPRVTDL LARDGLIEPSPPEDGAPAGDLTREPVDYPADRALRLQALARGDEGFVLGLAYSTQRGYGRTHPFVGEIRVGEVAVEFVPE ELGFAVPLGRVRLTECQMVNQFKGTGTAPPQFTRGYGLSFGQSERKAMAMALVDRALRAEELGEPVASPAQDQEFVLAHC DSLQATGFVEHLKLPHYVDFQAELELVRRLRAEFERASDAVEMQEAAE >Mature_368_residues MYVAVKGGEAAIDNAHRLLAETRRGDPALPELSVAQIREQMALLVDRVMTEGSLYDPDLAALALKQARGDVVEAVFLVRA YRTTLPRFGASAPVDTGAMAVERRISATFKDLPGGQVLGPTFDYTHRLVDFALAAETASEPAAEAEPRPDAGTCPRVTDL LARDGLIEPSPPEDGAPAGDLTREPVDYPADRALRLQALARGDEGFVLGLAYSTQRGYGRTHPFVGEIRVGEVAVEFVPE ELGFAVPLGRVRLTECQMVNQFKGTGTAPPQFTRGYGLSFGQSERKAMAMALVDRALRAEELGEPVASPAQDQEFVLAHC DSLQATGFVEHLKLPHYVDFQAELELVRRLRAEFERASDAVEMQEAAE
Specific function: Belongs to an operon involved in utilization of glyphosate and other phosphonates [H]
COG id: COG3626
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phnI family [H]
Homologues:
Organism=Escherichia coli, GI1790537, Length=355, Percent_Identity=63.3802816901408, Blast_Score=431, Evalue=1e-122,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008773 [H]
Pfam domain/function: PF05861 PhnI [H]
EC number: NA
Molecular weight: Translated: 39903; Mature: 39903
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVAVKGGEAAIDNAHRLLAETRRGDPALPELSVAQIREQMALLVDRVMTEGSLYDPDLA CEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH ALALKQARGDVVEAVFLVRAYRTTLPRFGASAPVDTGAMAVERRISATFKDLPGGQVLGP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECC TFDYTHRLVDFALAAETASEPAAEAEPRPDAGTCPRVTDLLARDGLIEPSPPEDGAPAGD CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC LTREPVDYPADRALRLQALARGDEGFVLGLAYSTQRGYGRTHPFVGEIRVGEVAVEFVPE CCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCEEECHHHHHHHHH ELGFAVPLGRVRLTECQMVNQFKGTGTAPPQFTRGYGLSFGQSERKAMAMALVDRALRAE HHCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ELGEPVASPAQDQEFVLAHCDSLQATGFVEHLKLPHYVDFQAELELVRRLRAEFERASDA HHCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHH VEMQEAAE HHHHHHCC >Mature Secondary Structure MYVAVKGGEAAIDNAHRLLAETRRGDPALPELSVAQIREQMALLVDRVMTEGSLYDPDLA CEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH ALALKQARGDVVEAVFLVRAYRTTLPRFGASAPVDTGAMAVERRISATFKDLPGGQVLGP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECC TFDYTHRLVDFALAAETASEPAAEAEPRPDAGTCPRVTDLLARDGLIEPSPPEDGAPAGD CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC LTREPVDYPADRALRLQALARGDEGFVLGLAYSTQRGYGRTHPFVGEIRVGEVAVEFVPE CCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCEEECHHHHHHHHH ELGFAVPLGRVRLTECQMVNQFKGTGTAPPQFTRGYGLSFGQSERKAMAMALVDRALRAE HHCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ELGEPVASPAQDQEFVLAHCDSLQATGFVEHLKLPHYVDFQAELELVRRLRAEFERASDA HHCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHH VEMQEAAE HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481431 [H]