Click here to switch to the map view.

The map label for this gene is yrdA [C]

Identifier: 170750053

GI number: 170750053

Start: 3886978

End: 3887511

Strand: Reverse

Name: yrdA [C]

Synonym: Mrad2831_3654

Alternate gene names: 170750053

Gene position: 3887511-3886978 (Counterclockwise)

Preceding gene: 170750056

Following gene: 170750050

Centisome position: 63.96

GC content: 71.54

Gene sequence:

>534_bases
ATGCCGCTCTACGCCCTCAACGATCACGTCCCCGACCTCGCCGACCCTGACCGGGTCTGGATCGCGCCCGACGCGCAGGT
GGTCGGCCGCGTGCATCTCGGCCTCGATGTCGGGATCTGGTTCGGCGCGGCCCTGCGCGGCGACAACGAGCCGATCCGCA
TCGGCGACCGCACCAACGTCCAGGAAGGCGTGATCATGCACGTCGATCCCGGCTTTCCCCTCGACATCGGGACCGACGTC
ACGATCGGGCACGGCGCGATCGTGCACGGCTGCACCATCGGGGACGGCAGCCTCGTCGGCATGGGGGCGACGGTTTTGAA
CGGGGCCCGGATCGGCCGCGGCTGCCTCGTCGGCGCCAACGCGCTGGTCACCGAGGGCAAGGAATTCCCGGATCACAGCC
TGATCGTCGGGGCGCCGGCGAAGGCCGTGCGCACCCTCGACGAGGCCGCGATCGAGGGCCTGCGGCAGGCCGCCCAGCGC
TACGTGGAGAATGCCCGGCGCTACCGGGCGGGCCTGCGCCGCATCGACGGCTGA

Upstream 100 bases:

>100_bases
GGGCGCGCCGTACCATTCCCGCGACAGGCGCTGCGCGTCATCCGTCGCGATCCCGGCCGCGCCGCGCGGTCGGGACGACC
ACTCCCTCCGAAAGGCCGCC

Downstream 100 bases:

>100_bases
CGGGTACGGGCCGCTCCCCGGGCGGGAGCGGCCGGGCCGCCCTTACTTCTTGGCCTTGCCGCGCTCGATCGCCTCCTCGA
TCAGCCGGTGGGCCTCTTCC

Product: hexapaptide repeat-containing transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MPLYALNDHVPDLADPDRVWIAPDAQVVGRVHLGLDVGIWFGAALRGDNEPIRIGDRTNVQEGVIMHVDPGFPLDIGTDV
TIGHGAIVHGCTIGDGSLVGMGATVLNGARIGRGCLVGANALVTEGKEFPDHSLIVGAPAKAVRTLDEAAIEGLRQAAQR
YVENARRYRAGLRRIDG

Sequences:

>Translated_177_residues
MPLYALNDHVPDLADPDRVWIAPDAQVVGRVHLGLDVGIWFGAALRGDNEPIRIGDRTNVQEGVIMHVDPGFPLDIGTDV
TIGHGAIVHGCTIGDGSLVGMGATVLNGARIGRGCLVGANALVTEGKEFPDHSLIVGAPAKAVRTLDEAAIEGLRQAAQR
YVENARRYRAGLRRIDG
>Mature_176_residues
PLYALNDHVPDLADPDRVWIAPDAQVVGRVHLGLDVGIWFGAALRGDNEPIRIGDRTNVQEGVIMHVDPGFPLDIGTDVT
IGHGAIVHGCTIGDGSLVGMGATVLNGARIGRGCLVGANALVTEGKEFPDHSLIVGAPAKAVRTLDEAAIEGLRQAAQRY
VENARRYRAGLRRIDG

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=158, Percent_Identity=42.4050632911392, Blast_Score=120, Evalue=7e-29,
Organism=Escherichia coli, GI1787667, Length=179, Percent_Identity=38.5474860335196, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI87081681, Length=172, Percent_Identity=33.7209302325581, Blast_Score=86, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18728; Mature: 18596

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLYALNDHVPDLADPDRVWIAPDAQVVGRVHLGLDVGIWFGAALRGDNEPIRIGDRTNV
CCCCCCCCCCCCCCCCCEEEECCCHHEEEEEEECEEEHHHEEEEECCCCCCEEECCCCCC
QEGVIMHVDPGFPLDIGTDVTIGHGAIVHGCTIGDGSLVGMGATVLNGARIGRGCLVGAN
CCCEEEEECCCCCCCCCCCEEECCCEEEEEEEECCCCEEECCHHHHCCCCCCCEEEECCC
ALVTEGKEFPDHSLIVGAPAKAVRTLDEAAIEGLRQAAQRYVENARRYRAGLRRIDG
CEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PLYALNDHVPDLADPDRVWIAPDAQVVGRVHLGLDVGIWFGAALRGDNEPIRIGDRTNV
CCCCCCCCCCCCCCCCEEEECCCHHEEEEEEECEEEHHHEEEEECCCCCCEEECCCCCC
QEGVIMHVDPGFPLDIGTDVTIGHGAIVHGCTIGDGSLVGMGATVLNGARIGRGCLVGAN
CCCEEEEECCCCCCCCCCCEEECCCEEEEEEEECCCCEEECCHHHHCCCCCCCEEEECCC
ALVTEGKEFPDHSLIVGAPAKAVRTLDEAAIEGLRQAAQRYVENARRYRAGLRRIDG
CEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]