| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750000
Identifier: 170750000
GI number: 170750000
Start: 3828770
End: 3829831
Strand: Direct
Name: 170750000
Synonym: Mrad2831_3601
Alternate gene names: NA
Gene position: 3828770-3829831 (Clockwise)
Preceding gene: 170749999
Following gene: 170750001
Centisome position: 63.0
GC content: 72.13
Gene sequence:
>1062_bases ATGAAACGGCGCAGCCTGCTCACGGTCGCGAGTGCGGCCACGGTCATGACGCTCGGCGGCGTCGGCTACGCCGCGCACCG GCGCGGACGGAATCCCTATTACCGCGGCCCGACCTCCGACCATTTCGACGGGCTGCGGTTCTTCCTGCCGGGACAGTCGA CCGACAAGGCGCTGCCGGACGTGCTGCGCTGGCAGGCTAAGCGGCAGCGCGAGCCCTGGCCGAAGAGCTTCCCCAGCCCC TATCCCGCCGACCGGCCACCGGAGCGGGTCGAAGGCCTGCGGGTCGTGCTGATCGGCCACGCGAGCTACCTCGTGCAGGT CGCCGGCCGGAACATCCTGATCGATCCGGTCTTCGCCAAGCGCGCGAGCCCGGTCCGCTTCGCCGGGCCGAAGCGCGTCA ACCCGCCGGGGATCGCCCTCGCCGACCTGCCGCCCATCGACGCGGTCCTCATCACCCACAATCACTACGACCATCTCGAC GGGCCGAGCCTCGCCCGGATCTGGCAGGCGCACCAGCCGCTGATCGTGGCGCCCCTGGGCAACGACACGATCCTGCGCGG CTACGACGACACGATGCATGTCGAGACCCGCGACTGGGGGGAGTCGGTCGATCTCGGCGACGGGCTGCAGGTCCACCTGA CCCCCGCGAACCACTGGTCGGCCCGGGGCGTCAACGACCGACGGATGGCACTGTGGTGCGCCTTCGTGCTGACCTCGCCC CGCGGCGTGCACTACCATGTCGGCGATACCGGCTTCGGCGACGGCGCGCTGTTCTCCGACGTCCGGGCCCGGTTCGGGCC GCCGCGCCTCGCGACGCTGCCGATCGGCGCCTACGAGCCGCGCTGGTTCATGCAGGCCCAGCACGTCGATCCGGCCGAGG CCGTGAAGGCCTTCACCCTGCTCGGCGCCGAGCAGGCCCTCGGCCACCATTGGGGCACGTTCCAGCTCACCGACGAAGGC ATCGAGCGGCCCGTCGAGGCGCTCGCGGCGGCCCTCGGCGGCGCCGGTATCCCGGCCGAGCGCTTCGTCGCCCTCCGGCC GGGCCAGGTCTGGGAGGCCTGA
Upstream 100 bases:
>100_bases CCCGCGATGCGCCCCTGAGACCGCGCCGAATCCGCCCTGAGGCTCCCCGCCGCGCCGCGGCAGCGCTTGACCGCCCCCCG GTTCCGGCCATCTCGGATCC
Downstream 100 bases:
>100_bases CCCGCGCTGTCTCCGGGCTGTCTTCGGGCTGTCTCCGGGAAGCGGCGGCAGGCGCAGGCGGGCATTGGGCACGATGCGTG CATCATTCTGTATGCAGCAT
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MKRRSLLTVASAATVMTLGGVGYAAHRRGRNPYYRGPTSDHFDGLRFFLPGQSTDKALPDVLRWQAKRQREPWPKSFPSP YPADRPPERVEGLRVVLIGHASYLVQVAGRNILIDPVFAKRASPVRFAGPKRVNPPGIALADLPPIDAVLITHNHYDHLD GPSLARIWQAHQPLIVAPLGNDTILRGYDDTMHVETRDWGESVDLGDGLQVHLTPANHWSARGVNDRRMALWCAFVLTSP RGVHYHVGDTGFGDGALFSDVRARFGPPRLATLPIGAYEPRWFMQAQHVDPAEAVKAFTLLGAEQALGHHWGTFQLTDEG IERPVEALAAALGGAGIPAERFVALRPGQVWEA
Sequences:
>Translated_353_residues MKRRSLLTVASAATVMTLGGVGYAAHRRGRNPYYRGPTSDHFDGLRFFLPGQSTDKALPDVLRWQAKRQREPWPKSFPSP YPADRPPERVEGLRVVLIGHASYLVQVAGRNILIDPVFAKRASPVRFAGPKRVNPPGIALADLPPIDAVLITHNHYDHLD GPSLARIWQAHQPLIVAPLGNDTILRGYDDTMHVETRDWGESVDLGDGLQVHLTPANHWSARGVNDRRMALWCAFVLTSP RGVHYHVGDTGFGDGALFSDVRARFGPPRLATLPIGAYEPRWFMQAQHVDPAEAVKAFTLLGAEQALGHHWGTFQLTDEG IERPVEALAAALGGAGIPAERFVALRPGQVWEA >Mature_353_residues MKRRSLLTVASAATVMTLGGVGYAAHRRGRNPYYRGPTSDHFDGLRFFLPGQSTDKALPDVLRWQAKRQREPWPKSFPSP YPADRPPERVEGLRVVLIGHASYLVQVAGRNILIDPVFAKRASPVRFAGPKRVNPPGIALADLPPIDAVLITHNHYDHLD GPSLARIWQAHQPLIVAPLGNDTILRGYDDTMHVETRDWGESVDLGDGLQVHLTPANHWSARGVNDRRMALWCAFVLTSP RGVHYHVGDTGFGDGALFSDVRARFGPPRLATLPIGAYEPRWFMQAQHVDPAEAVKAFTLLGAEQALGHHWGTFQLTDEG IERPVEALAAALGGAGIPAERFVALRPGQVWEA
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To K.pneumoniae romA [H]
Homologues:
Organism=Homo sapiens, GI170932483, Length=309, Percent_Identity=37.5404530744337, Blast_Score=196, Evalue=2e-50, Organism=Homo sapiens, GI170932481, Length=309, Percent_Identity=37.5404530744337, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17543102, Length=272, Percent_Identity=36.7647058823529, Blast_Score=181, Evalue=6e-46, Organism=Caenorhabditis elegans, GI17543100, Length=272, Percent_Identity=36.7647058823529, Blast_Score=181, Evalue=7e-46, Organism=Caenorhabditis elegans, GI25148824, Length=272, Percent_Identity=36.7647058823529, Blast_Score=181, Evalue=7e-46, Organism=Caenorhabditis elegans, GI17543104, Length=272, Percent_Identity=37.5, Blast_Score=177, Evalue=5e-45, Organism=Saccharomyces cerevisiae, GI6325154, Length=238, Percent_Identity=34.0336134453782, Blast_Score=135, Evalue=8e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38822; Mature: 38822
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRSLLTVASAATVMTLGGVGYAAHRRGRNPYYRGPTSDHFDGLRFFLPGQSTDKALPD CCCCCEEEHHHHHHEEEECCCCHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHH VLRWQAKRQREPWPKSFPSPYPADRPPERVEGLRVVLIGHASYLVQVAGRNILIDPVFAK HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCEEEEEEECHHHEEEECCCEEEECCHHHC RASPVRFAGPKRVNPPGIALADLPPIDAVLITHNHYDHLDGPSLARIWQAHQPLIVAPLG CCCCEEECCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCEEEEECC NDTILRGYDDTMHVETRDWGESVDLGDGLQVHLTPANHWSARGVNDRRMALWCAFVLTSP CCCEEECCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHEEEEEEHHCCC RGVHYHVGDTGFGDGALFSDVRARFGPPRLATLPIGAYEPRWFMQAQHVDPAEAVKAFTL CCEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHEEEECCCCHHHHHHHHHH LGAEQALGHHWGTFQLTDEGIERPVEALAAALGGAGIPAERFVALRPGQVWEA HCHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCCCCC >Mature Secondary Structure MKRRSLLTVASAATVMTLGGVGYAAHRRGRNPYYRGPTSDHFDGLRFFLPGQSTDKALPD CCCCCEEEHHHHHHEEEECCCCHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHH VLRWQAKRQREPWPKSFPSPYPADRPPERVEGLRVVLIGHASYLVQVAGRNILIDPVFAK HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCEEEEEEECHHHEEEECCCEEEECCHHHC RASPVRFAGPKRVNPPGIALADLPPIDAVLITHNHYDHLDGPSLARIWQAHQPLIVAPLG CCCCEEECCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCEEEEECC NDTILRGYDDTMHVETRDWGESVDLGDGLQVHLTPANHWSARGVNDRRMALWCAFVLTSP CCCEEECCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHEEEEEEHHCCC RGVHYHVGDTGFGDGALFSDVRARFGPPRLATLPIGAYEPRWFMQAQHVDPAEAVKAFTL CCEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHEEEECCCCHHHHHHHHHH LGAEQALGHHWGTFQLTDEGIERPVEALAAALGGAGIPAERFVALRPGQVWEA HCHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]