| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170749998
Identifier: 170749998
GI number: 170749998
Start: 3826715
End: 3827935
Strand: Direct
Name: 170749998
Synonym: Mrad2831_3599
Alternate gene names: NA
Gene position: 3826715-3827935 (Clockwise)
Preceding gene: 170749986
Following gene: 170749999
Centisome position: 62.96
GC content: 74.12
Gene sequence:
>1221_bases ATGGGGGTTTTCCCGGAGCCGGCGCGTCGCGCCGACGACGTGAGCCGACTCGTGCCGCAGACCCTGACCGGCACGGGCCA TTTCGAGGATGAAGCCGTGGCGTGGCTGCCGCGGGCCGGACGCGAGACAGGGCGCCGGTCACTTCGCCGCACCGGCCTCG GCCGGATCTCCGGGACGCTGGCCCTGGGGCTCGTCGCCGGGTTCGGCCTGCCGCAGGCCGCCTTCGCGCCCGCCTACTTC GCGCCGGCCGCCCAGGCCCACGACCGGGTCGACACCAGCCCGCGAGCCGCGCATGCCCTCGCACAACGCGCGTCCGAGCC CGCGGTTCCCGCGGAGGCGCCGGCGGCCAAGGACGCCTGGAACGGCCTGCCGGTGCCGGAGCAGGAGCCCGCCACCACGG CCCTGATCCAGGAAGACCTCGCGGCCCTGCCGCGGGTCACGCAGGAGCAGGACGCGGTCAAGTTCGGCGAGCGCAGCGTG CCGCGCAAGGTGGTCGACACGATCGTCAAGGCCTCCGACGAGGCCGGCGTCGATCCGGTCTACATGATGGCGCTGGCCGA CAAGGAATCGAGCTTCGACACGGACGCGAAGGCTGCCACATCCTCGGCGCAGGGGCTGTTCCAGTTCGTCGCCCGCACCT GGCTGGAGATGATCCGCGATTACGGCGCCCGCTACGGGCTCGCCGAGGAGGCCGCCGCCGTGAAGGGCCGGGGCGCCGCG ATCACCGTCGCGGGCAGCATGCGCGCCCGGGTGCTCGGCCTGCGCAACGACCCGCGCGTCGCCGCCCTGATGGCGGCCGA GCTGATCAAGCGCGATCGCGAGCGGATCGAGGCCCGGGTCGGGCGCGCGCTCACCACGACCGAGCTGTACCTCGCCCATT TCCTCGGCACGGCGAGCGCCGGCCGCTTCCTGTCGCTCTCCTCCGAGAAGCCCGACGAGGTCGCCGGACGCGAGTTCCGC ACGGCGGCCCGGGCCAATCGCAGCCTGTTCACCGAGAAGACGGGCGGCAAGCGCCGCAGCCTGACCGTGTCCGAGCTGCA CGACCGGATCGACGGCATGATCGACCGGCGGCTGACCCGCTACCAGGGCGTGGCGGCGGTCGCCGAGGCCCTCGACAAGG CGCCGGTCCAGAGCGACGTCGCCGCCGCCGAGGAGACGGCTCCCGTGGCCGGCAACCGCCGCGTCGAGGTGACGGAGGCG CTGCCGCCGGACGGGGTGTGA
Upstream 100 bases:
>100_bases CATTCTGGTCACGGCCGGCGTCGATAGGGCCGCCGCTTCCGGATAAAACCCGGCCGTCAGAGCCGGGCGGACGCAAGGAC CGATCTGAAGAGGACCAATG
Downstream 100 bases:
>100_bases GGACCCCGTCGGGGCGCCCGCTCGCCTGAGCCAATTGCCTGAGCAAGTTGGATCGCCGCTTCGGCGCGCCGGGTCTGTCG GATGGACAGTCCTCCCTGCC
Product: lytic transglycosylase
Products: NA
Alternate protein names: Lytic Transglycosylase; Transglycosylase Domain-Containing Protein; Transglycosylase SLT Domain Protein; Lytic Transglycosylase PleA
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MGVFPEPARRADDVSRLVPQTLTGTGHFEDEAVAWLPRAGRETGRRSLRRTGLGRISGTLALGLVAGFGLPQAAFAPAYF APAAQAHDRVDTSPRAAHALAQRASEPAVPAEAPAAKDAWNGLPVPEQEPATTALIQEDLAALPRVTQEQDAVKFGERSV PRKVVDTIVKASDEAGVDPVYMMALADKESSFDTDAKAATSSAQGLFQFVARTWLEMIRDYGARYGLAEEAAAVKGRGAA ITVAGSMRARVLGLRNDPRVAALMAAELIKRDRERIEARVGRALTTTELYLAHFLGTASAGRFLSLSSEKPDEVAGREFR TAARANRSLFTEKTGGKRRSLTVSELHDRIDGMIDRRLTRYQGVAAVAEALDKAPVQSDVAAAEETAPVAGNRRVEVTEA LPPDGV
Sequences:
>Translated_406_residues MGVFPEPARRADDVSRLVPQTLTGTGHFEDEAVAWLPRAGRETGRRSLRRTGLGRISGTLALGLVAGFGLPQAAFAPAYF APAAQAHDRVDTSPRAAHALAQRASEPAVPAEAPAAKDAWNGLPVPEQEPATTALIQEDLAALPRVTQEQDAVKFGERSV PRKVVDTIVKASDEAGVDPVYMMALADKESSFDTDAKAATSSAQGLFQFVARTWLEMIRDYGARYGLAEEAAAVKGRGAA ITVAGSMRARVLGLRNDPRVAALMAAELIKRDRERIEARVGRALTTTELYLAHFLGTASAGRFLSLSSEKPDEVAGREFR TAARANRSLFTEKTGGKRRSLTVSELHDRIDGMIDRRLTRYQGVAAVAEALDKAPVQSDVAAAEETAPVAGNRRVEVTEA LPPDGV >Mature_405_residues GVFPEPARRADDVSRLVPQTLTGTGHFEDEAVAWLPRAGRETGRRSLRRTGLGRISGTLALGLVAGFGLPQAAFAPAYFA PAAQAHDRVDTSPRAAHALAQRASEPAVPAEAPAAKDAWNGLPVPEQEPATTALIQEDLAALPRVTQEQDAVKFGERSVP RKVVDTIVKASDEAGVDPVYMMALADKESSFDTDAKAATSSAQGLFQFVARTWLEMIRDYGARYGLAEEAAAVKGRGAAI TVAGSMRARVLGLRNDPRVAALMAAELIKRDRERIEARVGRALTTTELYLAHFLGTASAGRFLSLSSEKPDEVAGREFRT AARANRSLFTEKTGGKRRSLTVSELHDRIDGMIDRRLTRYQGVAAVAEALDKAPVQSDVAAAEETAPVAGNRRVEVTEAL PPDGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43400; Mature: 43269
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVFPEPARRADDVSRLVPQTLTGTGHFEDEAVAWLPRAGRETGRRSLRRTGLGRISGTL CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCHHHHHHH ALGLVAGFGLPQAAFAPAYFAPAAQAHDRVDTSPRAAHALAQRASEPAVPAEAPAAKDAW HHHHHHHCCCCHHHHCCHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHC NGLPVPEQEPATTALIQEDLAALPRVTQEQDAVKFGERSVPRKVVDTIVKASDEAGVDPV CCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCE YMMALADKESSFDTDAKAATSSAQGLFQFVARTWLEMIRDYGARYGLAEEAAAVKGRGAA EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCE ITVAGSMRARVLGLRNDPRVAALMAAELIKRDRERIEARVGRALTTTELYLAHFLGTASA EEEECCCHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC GRFLSLSSEKPDEVAGREFRTAARANRSLFTEKTGGKRRSLTVSELHDRIDGMIDRRLTR CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH YQGVAAVAEALDKAPVQSDVAAAEETAPVAGNRRVEVTEALPPDGV HHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCC >Mature Secondary Structure GVFPEPARRADDVSRLVPQTLTGTGHFEDEAVAWLPRAGRETGRRSLRRTGLGRISGTL CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCHHHHHHH ALGLVAGFGLPQAAFAPAYFAPAAQAHDRVDTSPRAAHALAQRASEPAVPAEAPAAKDAW HHHHHHHCCCCHHHHCCHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHC NGLPVPEQEPATTALIQEDLAALPRVTQEQDAVKFGERSVPRKVVDTIVKASDEAGVDPV CCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCE YMMALADKESSFDTDAKAATSSAQGLFQFVARTWLEMIRDYGARYGLAEEAAAVKGRGAA EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCE ITVAGSMRARVLGLRNDPRVAALMAAELIKRDRERIEARVGRALTTTELYLAHFLGTASA EEEECCCHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC GRFLSLSSEKPDEVAGREFRTAARANRSLFTEKTGGKRRSLTVSELHDRIDGMIDRRLTR CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH YQGVAAVAEALDKAPVQSDVAAAEETAPVAGNRRVEVTEALPPDGV HHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA