| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is afr [H]
Identifier: 170749994
GI number: 170749994
Start: 3821996
End: 3822991
Strand: Reverse
Name: afr [H]
Synonym: Mrad2831_3595
Alternate gene names: 170749994
Gene position: 3822991-3821996 (Counterclockwise)
Preceding gene: 170749995
Following gene: 170749993
Centisome position: 62.9
GC content: 75.2
Gene sequence:
>996_bases ATGGACGCGGTCGGCTGGGGCATCGTCGGCTACGGCTGGGTCGCCCGCGACTACATGGAGCCGGGCATCCGCGCCGCCGG GCACCGGCTGGTCGCCGTCTGCGATCCGAACCCGGAGAGCCGAGCCGCAGCCGAGCGAGCGGGCGCGCGCGTCCATGCCG ACCTCGCCGGCCTCATCGCCGAGCCCGCGGTCGAGGCGGTCTACGTGGCGACGCCGAACCACCTCCACCGCGGCGCCGTG GAAGCGCTGGCGGCGGCCGGCAAGGCGGTGCTCTGCGAGAAGCCCATGGCGGCGACGCTCGGGGACGCCGAGGCCATTGC TCACGCCGTCGAGTCGCAAAGAATCTTCTACGGCACGGCCTTCGACCAGCGGCACCACCCGGCCCACCGGGCGATCCGCG CGCAGGTCGAGGCCGGGCGGCTCGGCACCGTGACGGCGGTGCGGATCGTCTATGCCTGCTGGCTCGGGCGCGACTGGTCG GAGGCCGGCCAGCCGAACTGGCGGATCGACGCCGCCCAGGCCGGAGGCGGCGCGCTGATGGACCTCGCCCCGCACGGGCT CGACCTCGTGGACTTCCTGCTCGGCGAGCCGATCGCCGACCTCGCGGCCCTGACGCAGACCAGGGCCCAGGACTACGCGG TCGACGACGGCGCCCTGCTGATCGGCCGGACCGCGGGCGGCGCGCTGGCGAGCCTCCACGTCGCCTACAATTGCCCGGAC GCGCTGCCCCGCCGCCGCCTGGAGGTGGTCGGCACGAAGGGCCTGCTCGTCGCCGAGAACACGATGGGCCAGACGGCCGG CGGATCCCTGACCTTCATCGACGGCGCCAGCGGCCGCGCGGAGCCGCTCGCCTTCGACGCCGACAGCTCGCCCTTCGCCG AGCAGGTGCGCGCCTTCGGCTCGGCCCTGCGCCGGCCCGAGGAGCGAGTGGCCTACTCGGCCGCGCGCGACCTCCACACG ATGCGGCTCGTCGCGCGCGCGTACGGGCAGGGGTAG
Upstream 100 bases:
>100_bases CCCCGGGCCCCGAGTCGCTGACCTTCGACGAGAGCCTCGATGCGCCGGAGACGCAGCGCGTGCGCGTGCGCGAATTCGTC GACCTGCCGGAGCGGTGGTG
Downstream 100 bases:
>100_bases CGGACAGGAATTTCAATCACGCAACCGACCCAAGCATCTCCCACTCACCCCTCATCCTGAGGTGCCGGAGCGCAGTGGAG GCCTCGAAGGAGGGCTCCAG
Product: oxidoreductase domain-containing protein
Products: NA
Alternate protein names: Anhydrofructose reductase; 1,5-anhydro-D-fructose reductase (1,5-anhydro-D-mannitol-forming) [H]
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MDAVGWGIVGYGWVARDYMEPGIRAAGHRLVAVCDPNPESRAAAERAGARVHADLAGLIAEPAVEAVYVATPNHLHRGAV EALAAAGKAVLCEKPMAATLGDAEAIAHAVESQRIFYGTAFDQRHHPAHRAIRAQVEAGRLGTVTAVRIVYACWLGRDWS EAGQPNWRIDAAQAGGGALMDLAPHGLDLVDFLLGEPIADLAALTQTRAQDYAVDDGALLIGRTAGGALASLHVAYNCPD ALPRRRLEVVGTKGLLVAENTMGQTAGGSLTFIDGASGRAEPLAFDADSSPFAEQVRAFGSALRRPEERVAYSAARDLHT MRLVARAYGQG
Sequences:
>Translated_331_residues MDAVGWGIVGYGWVARDYMEPGIRAAGHRLVAVCDPNPESRAAAERAGARVHADLAGLIAEPAVEAVYVATPNHLHRGAV EALAAAGKAVLCEKPMAATLGDAEAIAHAVESQRIFYGTAFDQRHHPAHRAIRAQVEAGRLGTVTAVRIVYACWLGRDWS EAGQPNWRIDAAQAGGGALMDLAPHGLDLVDFLLGEPIADLAALTQTRAQDYAVDDGALLIGRTAGGALASLHVAYNCPD ALPRRRLEVVGTKGLLVAENTMGQTAGGSLTFIDGASGRAEPLAFDADSSPFAEQVRAFGSALRRPEERVAYSAARDLHT MRLVARAYGQG >Mature_331_residues MDAVGWGIVGYGWVARDYMEPGIRAAGHRLVAVCDPNPESRAAAERAGARVHADLAGLIAEPAVEAVYVATPNHLHRGAV EALAAAGKAVLCEKPMAATLGDAEAIAHAVESQRIFYGTAFDQRHHPAHRAIRAQVEAGRLGTVTAVRIVYACWLGRDWS EAGQPNWRIDAAQAGGGALMDLAPHGLDLVDFLLGEPIADLAALTQTRAQDYAVDDGALLIGRTAGGALASLHVAYNCPD ALPRRRLEVVGTKGLLVAENTMGQTAGGSLTFIDGASGRAEPLAFDADSSPFAEQVRAFGSALRRPEERVAYSAARDLHT MRLVARAYGQG
Specific function: Catalyzes the NADPH-specific reduction of 1,5-anhydro-D- fructose to 1,5-anhydro-D-mannitol. Also shows some activity against structurally related compounds such as 3-keto-1,5-anhydro- D-fructose, D-glucosone and D-xylosone. The enzyme cannot use NADH as
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gfo/idh/mocA family [H]
Homologues:
Organism=Homo sapiens, GI7657212, Length=263, Percent_Identity=26.2357414448669, Blast_Score=77, Evalue=3e-14, Organism=Escherichia coli, GI87081947, Length=210, Percent_Identity=26.1904761904762, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI145693182, Length=198, Percent_Identity=26.2626262626263, Blast_Score=70, Evalue=2e-13, Organism=Drosophila melanogaster, GI24581115, Length=236, Percent_Identity=27.1186440677966, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000683 - InterPro: IPR004104 [H]
Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]
EC number: =1.1.1.292 [H]
Molecular weight: Translated: 34840; Mature: 34840
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAVGWGIVGYGWVARDYMEPGIRAAGHRLVAVCDPNPESRAAAERAGARVHADLAGLIA CCCCCCCHHHHHHHHHHHHCCCHHHCCCEEEEEECCCCHHHHHHHHCCCEEHHHHHHHHH EPAVEAVYVATPNHLHRGAVEALAAAGKAVLCEKPMAATLGDAEAIAHAVESQRIFYGTA CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEECCCCHHHCCHHHHHHHHHHCCEEEEEEC FDQRHHPAHRAIRAQVEAGRLGTVTAVRIVYACWLGRDWSEAGQPNWRIDAAQAGGGALM CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCCEEE DLAPHGLDLVDFLLGEPIADLAALTQTRAQDYAVDDGALLIGRTAGGALASLHVAYNCPD ECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCEECCCCEEEEECCCCCEEEEEEEECCCC ALPRRRLEVVGTKGLLVAENTMGQTAGGSLTFIDGASGRAEPLAFDADSSPFAEQVRAFG HHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCEEECCCCCHHHHHHHHHH SALRRPEERVAYSAARDLHTMRLVARAYGQG HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDAVGWGIVGYGWVARDYMEPGIRAAGHRLVAVCDPNPESRAAAERAGARVHADLAGLIA CCCCCCCHHHHHHHHHHHHCCCHHHCCCEEEEEECCCCHHHHHHHHCCCEEHHHHHHHHH EPAVEAVYVATPNHLHRGAVEALAAAGKAVLCEKPMAATLGDAEAIAHAVESQRIFYGTA CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEECCCCHHHCCHHHHHHHHHHCCEEEEEEC FDQRHHPAHRAIRAQVEAGRLGTVTAVRIVYACWLGRDWSEAGQPNWRIDAAQAGGGALM CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCCEEE DLAPHGLDLVDFLLGEPIADLAALTQTRAQDYAVDDGALLIGRTAGGALASLHVAYNCPD ECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCEECCCCEEEEECCCCCEEEEEEEECCCC ALPRRRLEVVGTKGLLVAENTMGQTAGGSLTFIDGASGRAEPLAFDADSSPFAEQVRAFG HHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCEEECCCCCHHHHHHHHHH SALRRPEERVAYSAARDLHTMRLVARAYGQG HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA