Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

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The map label for this gene is sgaU [C]

Identifier: 170749992

GI number: 170749992

Start: 3819310

End: 3820182

Strand: Reverse

Name: sgaU [C]

Synonym: Mrad2831_3593

Alternate gene names: 170749992

Gene position: 3820182-3819310 (Counterclockwise)

Preceding gene: 170749993

Following gene: 170749991

Centisome position: 62.85

GC content: 72.39

Gene sequence:

>873_bases
GTGACGCTCCGGTTCGCCTACAACACCAACGGCGCGGCCAACCACCGCCTCGACGACGCGCTCCACCTGATCAAGGCGGC
GGGCTACGATGGCGTGGCGCTCACCCTCGACATCCACCATCTCGACCCCTTCGCCGAGACCTGGGCGGCGGAGGCCGGCC
GGGTGGCGAGCCTGCTGGAGAAGCTGGAGCTGACCTGCGTCATCGAGACGGGTGCCCGCTTCCTGCTCGATCCGTCCGCC
AAGCACGAGCCGACGCTCGTGACCGCCGACGCCGCGGGCCGCGCCCGGCGCGTCGGCTTCCTGAAGCGCGCGATCGAGAT
CGGCGCGATGCTCTCCGCCGAGGCGGTCTCGTTCTGGGCCGGCGTGCCGAAGCCCGGCGTCGATCACGGCGAGGCCCGGC
GCTGGCTGGTCGAGGGTCTGCACGAGGTCGCGGCCTTCGCGGCCGAGTCCGGAATCGTGCCCTGCCTGGAGCCCGAGCCC
GGCATGCTGATCGAGACGCTCGACGATTACGCGGCGCTCGACGTGCCGGGGCTGAGGCTCGCCCTGGACACGGGTCACTG
CCTCGTCACCGGCGAGCGCGAGCCGGCGGCCGCCGTGCGGGAATTCGCCGACCGGATCGGCACCGTGGCGATCGAGGACA
TGAAGCGCGGCAGCCACATCCACCTGCCCTTCGGCGAGGGCGACATGGACGTGCCGGGCGTGCTGGAGGCTCTGGAGGCG
GTGGGCTTCGGCAAGCTGATCTGCGTCGAGCTCTCCCGCGAGAGCCACCGGGCCGACGTGATGATCCCGCAGGCGCTGGA
CTATCTCCGCGGCTGCCGGCGCCCCGGCCCGGTCCTGGCGGGCGAGCAGGAGACGCGGCGGCAATGGCAGTGA

Upstream 100 bases:

>100_bases
CCCTGGCCGAGCGGATCGTCGGGCGGCACTATCCGCTCTACCGCGAGCCGGAATCGCACCACGCGCCCTTCCGCCTCGCC
CAGCGGAAGGGGAGGGCGGC

Downstream 100 bases:

>100_bases
GGGCCAAATTGCGGCGAGGCGAGGATCGGGCACGGGAGAGGGAGCGCCTCGGCGCCTCTCCCGGTCTCTGCGAAGGTGCG
GTGCGATGAGAATCCTCTTC

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: Isomerase; Xylose Isomerase Domain Protein TIM Barrel; Sugar Phosphate Isomerase/Epimerase; LOW QUALITY PROTEIN Isomerase; Abasic Site Repairing; LOW QUALITY PROTEIN Sugar Phosphate Isomerase/Epimerase; Xylose Isomerase Domain Protein Tim Barrel; AP Endonuclease; Sugar Phosphate Isomerases/Epimerases; Endonuclease

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MTLRFAYNTNGAANHRLDDALHLIKAAGYDGVALTLDIHHLDPFAETWAAEAGRVASLLEKLELTCVIETGARFLLDPSA
KHEPTLVTADAAGRARRVGFLKRAIEIGAMLSAEAVSFWAGVPKPGVDHGEARRWLVEGLHEVAAFAAESGIVPCLEPEP
GMLIETLDDYAALDVPGLRLALDTGHCLVTGEREPAAAVREFADRIGTVAIEDMKRGSHIHLPFGEGDMDVPGVLEALEA
VGFGKLICVELSRESHRADVMIPQALDYLRGCRRPGPVLAGEQETRRQWQ

Sequences:

>Translated_290_residues
MTLRFAYNTNGAANHRLDDALHLIKAAGYDGVALTLDIHHLDPFAETWAAEAGRVASLLEKLELTCVIETGARFLLDPSA
KHEPTLVTADAAGRARRVGFLKRAIEIGAMLSAEAVSFWAGVPKPGVDHGEARRWLVEGLHEVAAFAAESGIVPCLEPEP
GMLIETLDDYAALDVPGLRLALDTGHCLVTGEREPAAAVREFADRIGTVAIEDMKRGSHIHLPFGEGDMDVPGVLEALEA
VGFGKLICVELSRESHRADVMIPQALDYLRGCRRPGPVLAGEQETRRQWQ
>Mature_289_residues
TLRFAYNTNGAANHRLDDALHLIKAAGYDGVALTLDIHHLDPFAETWAAEAGRVASLLEKLELTCVIETGARFLLDPSAK
HEPTLVTADAAGRARRVGFLKRAIEIGAMLSAEAVSFWAGVPKPGVDHGEARRWLVEGLHEVAAFAAESGIVPCLEPEPG
MLIETLDDYAALDVPGLRLALDTGHCLVTGEREPAAAVREFADRIGTVAIEDMKRGSHIHLPFGEGDMDVPGVLEALEAV
GFGKLICVELSRESHRADVMIPQALDYLRGCRRPGPVLAGEQETRRQWQ

Specific function: Isomerization Of D-Arabino-6-Hexulose 3-Phosphate To D-Fructose 6-Phosphate. [C]

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.-.-.- [C]

Molecular weight: Translated: 31378; Mature: 31247

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRFAYNTNGAANHRLDDALHLIKAAGYDGVALTLDIHHLDPFAETWAAEAGRVASLLE
CEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHCCHHHHHHHH
KLELTCVIETGARFLLDPSAKHEPTLVTADAAGRARRVGFLKRAIEIGAMLSAEAVSFWA
HHHEEEEEECCCEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GVPKPGVDHGEARRWLVEGLHEVAAFAAESGIVPCLEPEPGMLIETLDDYAALDVPGLRL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHCCCCCEEE
ALDTGHCLVTGEREPAAAVREFADRIGTVAIEDMKRGSHIHLPFGEGDMDVPGVLEALEA
EEECCCEEEECCCCHHHHHHHHHHHHCCEEEEHHCCCCEEEEECCCCCCCCHHHHHHHHH
VGFGKLICVELSRESHRADVMIPQALDYLRGCRRPGPVLAGEQETRRQWQ
CCCCEEEEEEECCCCCCCCEECHHHHHHHHHCCCCCCCCCCCHHHHHCCC
>Mature Secondary Structure 
TLRFAYNTNGAANHRLDDALHLIKAAGYDGVALTLDIHHLDPFAETWAAEAGRVASLLE
EEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHCCHHHHHHHH
KLELTCVIETGARFLLDPSAKHEPTLVTADAAGRARRVGFLKRAIEIGAMLSAEAVSFWA
HHHEEEEEECCCEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GVPKPGVDHGEARRWLVEGLHEVAAFAAESGIVPCLEPEPGMLIETLDDYAALDVPGLRL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHCCCCCEEE
ALDTGHCLVTGEREPAAAVREFADRIGTVAIEDMKRGSHIHLPFGEGDMDVPGVLEALEA
EEECCCEEEECCCCHHHHHHHHHHHHCCEEEEHHCCCCEEEEECCCCCCCCHHHHHHHHH
VGFGKLICVELSRESHRADVMIPQALDYLRGCRRPGPVLAGEQETRRQWQ
CCCCEEEEEEECCCCCCCCEECHHHHHHHHHCCCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA