| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is ybhN [C]
Identifier: 170749988
GI number: 170749988
Start: 3815253
End: 3816341
Strand: Reverse
Name: ybhN [C]
Synonym: Mrad2831_3589
Alternate gene names: 170749988
Gene position: 3816341-3815253 (Counterclockwise)
Preceding gene: 170749989
Following gene: 170749987
Centisome position: 62.79
GC content: 70.34
Gene sequence:
>1089_bases ATGAATTTTCAGGGACAGCACCGGAGCCCGGTCGAGCCGGTCGAGCCGGTCCAGCACGATGCCGGAGCGGGCTCGAAGCG GAAGAGCCGGCGCAGCCGCTATGCCTGGATCGGCACGGCGGCCAGCATCGTGCTGTTCGCGGTCTCCCTCGGCGTCCTGT GGAAGCTCGTGCAGAGCGTCAGCTGGGCGGAGGTGCGCAGCGCCATCGCGGCCGCGACCGCCGAGCAGCTCGGCCTCGCC TTCCTGTTCGTCGGCGTCAGCTACCTGTTCCTGACCGGCTACGACGCGCTGGCCCTGCGCCAGCTCAAGATCAAGGTGCC GTACCGGATCACCGCGCTCGCCTCGTTCACGAGCTACGCGGTGAGCTTCACCCTCGGCTTCCCGCTGCTCACCGCCGGGA CGATCCGCTACTGGATCTACGCGCGGCAGGGCCTCTCGACGGCCAAGATCGCCGCGCTCACCGTCATCGCCGGCTTCACC TTCTGGCTCGGCATGGGCGTGGTGCTGGGCCTGAGCCTGATCATCGAGGCCGGCCAGCTCGCCGGGCTCGCCTTCACGTC GATCCGGATCAACCAGGGTGTCGGCCTCGCGGCGCTCGCCCTGGTGCTCGGCTACCTGGCCTGGGTCTCGGCCAAGAAGC GCAGCATCACCGTGAAGCACTGGCGCCTGGAGCTGCCCGGGGCGTCCGTGTCGATCGGCCAGATGATCGTCGGCATCGGC GACGTCTGCGCGGCGGCGGCTGTGCTCTACGTCCTGCTGCCGCAGGAGACGACGCTGGGCTTCACCACCTTCCTGGCGAT CTACGTGCTGGCCGCCATGCTGGGGATCGCGTCGAACGCGCCCGGCGGCATCGGGGTGTTCGAGGCCACCGTGCTCCTCG CCCTGTCGAGCCTGCCGCGCAACGAGGTGCTGACCTCGCTGCTGCTGTTCCGGGGCTGCTACTACGTCGTGCCGTTCGTG ACCGCCCTGGCGATGCTCGGCCTCTACGAGATCGTGAAGCGTGCGGGCGGTGCCCGCGATCCCGGCCCGCCGGAGGGCAC GGCCGGGCCGTCCGGCCGGGCGTGGCGCGACGAGTCCGAGTCCCGCTGA
Upstream 100 bases:
>100_bases GGCCTACATGCGGGGCAACGGGCCGCGGTCCGGGAGATTCCGGCACGGGCTGACGGCCTTCGGCCGGGCCGCGCAGCCGG AAGGGCGGACGCCGATCGGC
Downstream 100 bases:
>100_bases TCGGCCGGCGCGCCCGCCATGTCCGGCCGCCTGCGCAGCTCCCCCGCCTGGACCGGCGCCGCGATCGCCGCGGGCCTGCT CGGGCTCGCCACGGCCCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MNFQGQHRSPVEPVEPVQHDAGAGSKRKSRRSRYAWIGTAASIVLFAVSLGVLWKLVQSVSWAEVRSAIAAATAEQLGLA FLFVGVSYLFLTGYDALALRQLKIKVPYRITALASFTSYAVSFTLGFPLLTAGTIRYWIYARQGLSTAKIAALTVIAGFT FWLGMGVVLGLSLIIEAGQLAGLAFTSIRINQGVGLAALALVLGYLAWVSAKKRSITVKHWRLELPGASVSIGQMIVGIG DVCAAAAVLYVLLPQETTLGFTTFLAIYVLAAMLGIASNAPGGIGVFEATVLLALSSLPRNEVLTSLLLFRGCYYVVPFV TALAMLGLYEIVKRAGGARDPGPPEGTAGPSGRAWRDESESR
Sequences:
>Translated_362_residues MNFQGQHRSPVEPVEPVQHDAGAGSKRKSRRSRYAWIGTAASIVLFAVSLGVLWKLVQSVSWAEVRSAIAAATAEQLGLA FLFVGVSYLFLTGYDALALRQLKIKVPYRITALASFTSYAVSFTLGFPLLTAGTIRYWIYARQGLSTAKIAALTVIAGFT FWLGMGVVLGLSLIIEAGQLAGLAFTSIRINQGVGLAALALVLGYLAWVSAKKRSITVKHWRLELPGASVSIGQMIVGIG DVCAAAAVLYVLLPQETTLGFTTFLAIYVLAAMLGIASNAPGGIGVFEATVLLALSSLPRNEVLTSLLLFRGCYYVVPFV TALAMLGLYEIVKRAGGARDPGPPEGTAGPSGRAWRDESESR >Mature_362_residues MNFQGQHRSPVEPVEPVQHDAGAGSKRKSRRSRYAWIGTAASIVLFAVSLGVLWKLVQSVSWAEVRSAIAAATAEQLGLA FLFVGVSYLFLTGYDALALRQLKIKVPYRITALASFTSYAVSFTLGFPLLTAGTIRYWIYARQGLSTAKIAALTVIAGFT FWLGMGVVLGLSLIIEAGQLAGLAFTSIRINQGVGLAALALVLGYLAWVSAKKRSITVKHWRLELPGASVSIGQMIVGIG DVCAAAAVLYVLLPQETTLGFTTFLAIYVLAAMLGIASNAPGGIGVFEATVLLALSSLPRNEVLTSLLLFRGCYYVVPFV TALAMLGLYEIVKRAGGARDPGPPEGTAGPSGRAWRDESESR
Specific function: Unknown
COG id: COG0392
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli ybhN [H]
Homologues:
Organism=Escherichia coli, GI1787006, Length=289, Percent_Identity=29.4117647058824, Blast_Score=84, Evalue=1e-17,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022791 [H]
Pfam domain/function: PF03706 UPF0104 [H]
EC number: NA
Molecular weight: Translated: 38475; Mature: 38475
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFQGQHRSPVEPVEPVQHDAGAGSKRKSRRSRYAWIGTAASIVLFAVSLGVLWKLVQSV CCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SWAEVRSAIAAATAEQLGLAFLFVGVSYLFLTGYDALALRQLKIKVPYRITALASFTSYA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEECCEEHHHHHHHHHHH VSFTLGFPLLTAGTIRYWIYARQGLSTAKIAALTVIAGFTFWLGMGVVLGLSLIIEAGQL HHHHHCCHHHHHHHHHHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGLAFTSIRINQGVGLAALALVLGYLAWVSAKKRSITVKHWRLELPGASVSIGQMIVGIG HHEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCHHHHHHHHH DVCAAAAVLYVLLPQETTLGFTTFLAIYVLAAMLGIASNAPGGIGVFEATVLLALSSLPR HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCH NEVLTSLLLFRGCYYVVPFVTALAMLGLYEIVKRAGGARDPGPPEGTAGPSGRAWRDESE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC SR CC >Mature Secondary Structure MNFQGQHRSPVEPVEPVQHDAGAGSKRKSRRSRYAWIGTAASIVLFAVSLGVLWKLVQSV CCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SWAEVRSAIAAATAEQLGLAFLFVGVSYLFLTGYDALALRQLKIKVPYRITALASFTSYA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEECCEEHHHHHHHHHHH VSFTLGFPLLTAGTIRYWIYARQGLSTAKIAALTVIAGFTFWLGMGVVLGLSLIIEAGQL HHHHHCCHHHHHHHHHHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGLAFTSIRINQGVGLAALALVLGYLAWVSAKKRSITVKHWRLELPGASVSIGQMIVGIG HHEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCHHHHHHHHH DVCAAAAVLYVLLPQETTLGFTTFLAIYVLAAMLGIASNAPGGIGVFEATVLLALSSLPR HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCH NEVLTSLLLFRGCYYVVPFVTALAMLGLYEIVKRAGGARDPGPPEGTAGPSGRAWRDESE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC SR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]