Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

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The map label for this gene is ybhN [C]

Identifier: 170749988

GI number: 170749988

Start: 3815253

End: 3816341

Strand: Reverse

Name: ybhN [C]

Synonym: Mrad2831_3589

Alternate gene names: 170749988

Gene position: 3816341-3815253 (Counterclockwise)

Preceding gene: 170749989

Following gene: 170749987

Centisome position: 62.79

GC content: 70.34

Gene sequence:

>1089_bases
ATGAATTTTCAGGGACAGCACCGGAGCCCGGTCGAGCCGGTCGAGCCGGTCCAGCACGATGCCGGAGCGGGCTCGAAGCG
GAAGAGCCGGCGCAGCCGCTATGCCTGGATCGGCACGGCGGCCAGCATCGTGCTGTTCGCGGTCTCCCTCGGCGTCCTGT
GGAAGCTCGTGCAGAGCGTCAGCTGGGCGGAGGTGCGCAGCGCCATCGCGGCCGCGACCGCCGAGCAGCTCGGCCTCGCC
TTCCTGTTCGTCGGCGTCAGCTACCTGTTCCTGACCGGCTACGACGCGCTGGCCCTGCGCCAGCTCAAGATCAAGGTGCC
GTACCGGATCACCGCGCTCGCCTCGTTCACGAGCTACGCGGTGAGCTTCACCCTCGGCTTCCCGCTGCTCACCGCCGGGA
CGATCCGCTACTGGATCTACGCGCGGCAGGGCCTCTCGACGGCCAAGATCGCCGCGCTCACCGTCATCGCCGGCTTCACC
TTCTGGCTCGGCATGGGCGTGGTGCTGGGCCTGAGCCTGATCATCGAGGCCGGCCAGCTCGCCGGGCTCGCCTTCACGTC
GATCCGGATCAACCAGGGTGTCGGCCTCGCGGCGCTCGCCCTGGTGCTCGGCTACCTGGCCTGGGTCTCGGCCAAGAAGC
GCAGCATCACCGTGAAGCACTGGCGCCTGGAGCTGCCCGGGGCGTCCGTGTCGATCGGCCAGATGATCGTCGGCATCGGC
GACGTCTGCGCGGCGGCGGCTGTGCTCTACGTCCTGCTGCCGCAGGAGACGACGCTGGGCTTCACCACCTTCCTGGCGAT
CTACGTGCTGGCCGCCATGCTGGGGATCGCGTCGAACGCGCCCGGCGGCATCGGGGTGTTCGAGGCCACCGTGCTCCTCG
CCCTGTCGAGCCTGCCGCGCAACGAGGTGCTGACCTCGCTGCTGCTGTTCCGGGGCTGCTACTACGTCGTGCCGTTCGTG
ACCGCCCTGGCGATGCTCGGCCTCTACGAGATCGTGAAGCGTGCGGGCGGTGCCCGCGATCCCGGCCCGCCGGAGGGCAC
GGCCGGGCCGTCCGGCCGGGCGTGGCGCGACGAGTCCGAGTCCCGCTGA

Upstream 100 bases:

>100_bases
GGCCTACATGCGGGGCAACGGGCCGCGGTCCGGGAGATTCCGGCACGGGCTGACGGCCTTCGGCCGGGCCGCGCAGCCGG
AAGGGCGGACGCCGATCGGC

Downstream 100 bases:

>100_bases
TCGGCCGGCGCGCCCGCCATGTCCGGCCGCCTGCGCAGCTCCCCCGCCTGGACCGGCGCCGCGATCGCCGCGGGCCTGCT
CGGGCTCGCCACGGCCCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MNFQGQHRSPVEPVEPVQHDAGAGSKRKSRRSRYAWIGTAASIVLFAVSLGVLWKLVQSVSWAEVRSAIAAATAEQLGLA
FLFVGVSYLFLTGYDALALRQLKIKVPYRITALASFTSYAVSFTLGFPLLTAGTIRYWIYARQGLSTAKIAALTVIAGFT
FWLGMGVVLGLSLIIEAGQLAGLAFTSIRINQGVGLAALALVLGYLAWVSAKKRSITVKHWRLELPGASVSIGQMIVGIG
DVCAAAAVLYVLLPQETTLGFTTFLAIYVLAAMLGIASNAPGGIGVFEATVLLALSSLPRNEVLTSLLLFRGCYYVVPFV
TALAMLGLYEIVKRAGGARDPGPPEGTAGPSGRAWRDESESR

Sequences:

>Translated_362_residues
MNFQGQHRSPVEPVEPVQHDAGAGSKRKSRRSRYAWIGTAASIVLFAVSLGVLWKLVQSVSWAEVRSAIAAATAEQLGLA
FLFVGVSYLFLTGYDALALRQLKIKVPYRITALASFTSYAVSFTLGFPLLTAGTIRYWIYARQGLSTAKIAALTVIAGFT
FWLGMGVVLGLSLIIEAGQLAGLAFTSIRINQGVGLAALALVLGYLAWVSAKKRSITVKHWRLELPGASVSIGQMIVGIG
DVCAAAAVLYVLLPQETTLGFTTFLAIYVLAAMLGIASNAPGGIGVFEATVLLALSSLPRNEVLTSLLLFRGCYYVVPFV
TALAMLGLYEIVKRAGGARDPGPPEGTAGPSGRAWRDESESR
>Mature_362_residues
MNFQGQHRSPVEPVEPVQHDAGAGSKRKSRRSRYAWIGTAASIVLFAVSLGVLWKLVQSVSWAEVRSAIAAATAEQLGLA
FLFVGVSYLFLTGYDALALRQLKIKVPYRITALASFTSYAVSFTLGFPLLTAGTIRYWIYARQGLSTAKIAALTVIAGFT
FWLGMGVVLGLSLIIEAGQLAGLAFTSIRINQGVGLAALALVLGYLAWVSAKKRSITVKHWRLELPGASVSIGQMIVGIG
DVCAAAAVLYVLLPQETTLGFTTFLAIYVLAAMLGIASNAPGGIGVFEATVLLALSSLPRNEVLTSLLLFRGCYYVVPFV
TALAMLGLYEIVKRAGGARDPGPPEGTAGPSGRAWRDESESR

Specific function: Unknown

COG id: COG0392

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybhN [H]

Homologues:

Organism=Escherichia coli, GI1787006, Length=289, Percent_Identity=29.4117647058824, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022791 [H]

Pfam domain/function: PF03706 UPF0104 [H]

EC number: NA

Molecular weight: Translated: 38475; Mature: 38475

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFQGQHRSPVEPVEPVQHDAGAGSKRKSRRSRYAWIGTAASIVLFAVSLGVLWKLVQSV
CCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SWAEVRSAIAAATAEQLGLAFLFVGVSYLFLTGYDALALRQLKIKVPYRITALASFTSYA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEECCEEHHHHHHHHHHH
VSFTLGFPLLTAGTIRYWIYARQGLSTAKIAALTVIAGFTFWLGMGVVLGLSLIIEAGQL
HHHHHCCHHHHHHHHHHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLAFTSIRINQGVGLAALALVLGYLAWVSAKKRSITVKHWRLELPGASVSIGQMIVGIG
HHEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCHHHHHHHHH
DVCAAAAVLYVLLPQETTLGFTTFLAIYVLAAMLGIASNAPGGIGVFEATVLLALSSLPR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCH
NEVLTSLLLFRGCYYVVPFVTALAMLGLYEIVKRAGGARDPGPPEGTAGPSGRAWRDESE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
SR
CC
>Mature Secondary Structure
MNFQGQHRSPVEPVEPVQHDAGAGSKRKSRRSRYAWIGTAASIVLFAVSLGVLWKLVQSV
CCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SWAEVRSAIAAATAEQLGLAFLFVGVSYLFLTGYDALALRQLKIKVPYRITALASFTSYA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEECCEEHHHHHHHHHHH
VSFTLGFPLLTAGTIRYWIYARQGLSTAKIAALTVIAGFTFWLGMGVVLGLSLIIEAGQL
HHHHHCCHHHHHHHHHHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLAFTSIRINQGVGLAALALVLGYLAWVSAKKRSITVKHWRLELPGASVSIGQMIVGIG
HHEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCHHHHHHHHH
DVCAAAAVLYVLLPQETTLGFTTFLAIYVLAAMLGIASNAPGGIGVFEATVLLALSSLPR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCH
NEVLTSLLLFRGCYYVVPFVTALAMLGLYEIVKRAGGARDPGPPEGTAGPSGRAWRDESE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
SR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]