| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is ywfA [H]
Identifier: 170749961
GI number: 170749961
Start: 3780722
End: 3782008
Strand: Reverse
Name: ywfA [H]
Synonym: Mrad2831_3562
Alternate gene names: 170749961
Gene position: 3782008-3780722 (Counterclockwise)
Preceding gene: 170749962
Following gene: 170749958
Centisome position: 62.23
GC content: 74.2
Gene sequence:
>1287_bases ATGCGATGCCGCGAGTCTGATCCCGCCCGCGTCGCGAAGCGTGCCATGACCGACAGCACAGAGCCGGCTCTCTCGTCCCG TGCGGCCGTCTCCGCGCCGCCGGCCACGTCGATCCCGCGGCTGATCCTCGTGCTGGCCTGCGCGGGGTTCGGAAGCACCT TCGCGCTCCGCTCGGTCGAGCCCCTGGTCGGCGTGCTCGCGCGGGATCTCGCGAGCGACGCCCACACGGTGGCGCTCCTC TCCACCGCCTTCGCGCTGCCCTACGCCTTCATCCAGCCGGTGCTCGGCCCGATCGGCGACGCGCTCGGCAAGGAGCGGGT GATGAGCACCTGCCTCGCGGTGCTCGCCGTCGCGCTGACGCTGTGCAGCGTCGCGCCGGATATCGGCAGCCTGTTCGGCC TGCGCATGCTGGCGGGGGCGGCCGCGGGCGGCTGCATCCCGCTCTCGCTGGCGCTCCTGGGCGACCGGGTGCCGATGGAG AGCCGTCAGGTGGCGATCGGGCGCTTCCTCGTGGCGGTGATCCTCGGCCAGCTCTCGGGCTCGACCTTCGCGGGCCTGAT CGAGGCGGCGATCGGCTGGCGCGGCGTCTTCGCGGTCACCGCCGCGGTGGCGGCCCTGGCCTGTGCGGCGACCGTCTTCG GCTTCGACCGGGCCGGCCGGGCCCCGGCCCGCCGCCCCGCCTTCGGCGAGGCGGTGACGCGCTACCGGACGATCCTGCGC AATCCGCGGGCGCGGGTGCTGTTCGCGGCGGTGTTCATCGAGGCGATCGCGATCTTCGGCGTGTTCCCGCATCTCGCGCC GCTGATCGAGGCGCGGGGGGAGGGTGGCCCGCGCGAGGCCGGTCTGGTCCTGGCGGGGTTCGCGGTCGGCGGCCTGCTCT ACTCGGCGCTCGTCGGGCTGCTGGTGCGGCTGCTCGGCCTGCCGCGGATGCTGATCGGCGGCGGGCTGATCTGCGGCGCA TCGCTCACTGTGGTCGGGCTCGCGGGCTCCTGGCAGGTCGACTGCGCCGCGCTCACCGCCATGGGCCTCGGCTTCTACAT GCTGCACAACACCTACCAGACGCAGGTCACCGAGGTCGCGCCCAAGGCCCGCGCCTCCGCGGTGGCGCTCCACGCCTTCT CGTTCTTCTGCGGTCAGGCGCTCGGCGTCGCGGTGATCGGGCAGGCGCTGCTCCGGCTCGGCCAGCTCGGGGCGCTCCTG GGGTGCGCCGTCACCATCCTGGCGCTCGGGATCGCCACGGCCATCGCCCTGCGGCAGAAGCCGGCGCCGGTGGCGTTCCC CAGCTGA
Upstream 100 bases:
>100_bases GGCCCTGCGCTGGGCCTTCGCGCACCCGACCGACAATTCGGATCCCGCGTTCTACGCGCACTGATCTGTCGCGCGGCGGG GTTCCGCTCCGGCGAGGGAG
Downstream 100 bases:
>100_bases GGTCAGGGCCGCCGCAGCGCCAGACCTTTCAGGTCGAAGTCCGGATCGGCCGCCTGGTCGGGCGTCAGCGGCGTTCCGGC CGTGAGCAGGCGCCGCGCGA
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MRCRESDPARVAKRAMTDSTEPALSSRAAVSAPPATSIPRLILVLACAGFGSTFALRSVEPLVGVLARDLASDAHTVALL STAFALPYAFIQPVLGPIGDALGKERVMSTCLAVLAVALTLCSVAPDIGSLFGLRMLAGAAAGGCIPLSLALLGDRVPME SRQVAIGRFLVAVILGQLSGSTFAGLIEAAIGWRGVFAVTAAVAALACAATVFGFDRAGRAPARRPAFGEAVTRYRTILR NPRARVLFAAVFIEAIAIFGVFPHLAPLIEARGEGGPREAGLVLAGFAVGGLLYSALVGLLVRLLGLPRMLIGGGLICGA SLTVVGLAGSWQVDCAALTAMGLGFYMLHNTYQTQVTEVAPKARASAVALHAFSFFCGQALGVAVIGQALLRLGQLGALL GCAVTILALGIATAIALRQKPAPVAFPS
Sequences:
>Translated_428_residues MRCRESDPARVAKRAMTDSTEPALSSRAAVSAPPATSIPRLILVLACAGFGSTFALRSVEPLVGVLARDLASDAHTVALL STAFALPYAFIQPVLGPIGDALGKERVMSTCLAVLAVALTLCSVAPDIGSLFGLRMLAGAAAGGCIPLSLALLGDRVPME SRQVAIGRFLVAVILGQLSGSTFAGLIEAAIGWRGVFAVTAAVAALACAATVFGFDRAGRAPARRPAFGEAVTRYRTILR NPRARVLFAAVFIEAIAIFGVFPHLAPLIEARGEGGPREAGLVLAGFAVGGLLYSALVGLLVRLLGLPRMLIGGGLICGA SLTVVGLAGSWQVDCAALTAMGLGFYMLHNTYQTQVTEVAPKARASAVALHAFSFFCGQALGVAVIGQALLRLGQLGALL GCAVTILALGIATAIALRQKPAPVAFPS >Mature_428_residues MRCRESDPARVAKRAMTDSTEPALSSRAAVSAPPATSIPRLILVLACAGFGSTFALRSVEPLVGVLARDLASDAHTVALL STAFALPYAFIQPVLGPIGDALGKERVMSTCLAVLAVALTLCSVAPDIGSLFGLRMLAGAAAGGCIPLSLALLGDRVPME SRQVAIGRFLVAVILGQLSGSTFAGLIEAAIGWRGVFAVTAAVAALACAATVFGFDRAGRAPARRPAFGEAVTRYRTILR NPRARVLFAAVFIEAIAIFGVFPHLAPLIEARGEGGPREAGLVLAGFAVGGLLYSALVGLLVRLLGLPRMLIGGGLICGA SLTVVGLAGSWQVDCAALTAMGLGFYMLHNTYQTQVTEVAPKARASAVALHAFSFFCGQALGVAVIGQALLRLGQLGALL GCAVTILALGIATAIALRQKPAPVAFPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43764; Mature: 43764
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCRESDPARVAKRAMTDSTEPALSSRAAVSAPPATSIPRLILVLACAGFGSTFALRSVE CCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH PLVGVLARDLASDAHTVALLSTAFALPYAFIQPVLGPIGDALGKERVMSTCLAVLAVALT HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCSVAPDIGSLFGLRMLAGAAAGGCIPLSLALLGDRVPMESRQVAIGRFLVAVILGQLSG HHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC STFAGLIEAAIGWRGVFAVTAAVAALACAATVFGFDRAGRAPARRPAFGEAVTRYRTILR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH NPRARVLFAAVFIEAIAIFGVFPHLAPLIEARGEGGPREAGLVLAGFAVGGLLYSALVGL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LVRLLGLPRMLIGGGLICGASLTVVGLAGSWQVDCAALTAMGLGFYMLHNTYQTQVTEVA HHHHHCCCHHHHCCCHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH PKARASAVALHAFSFFCGQALGVAVIGQALLRLGQLGALLGCAVTILALGIATAIALRQK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PAPVAFPS CCCCCCCC >Mature Secondary Structure MRCRESDPARVAKRAMTDSTEPALSSRAAVSAPPATSIPRLILVLACAGFGSTFALRSVE CCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH PLVGVLARDLASDAHTVALLSTAFALPYAFIQPVLGPIGDALGKERVMSTCLAVLAVALT HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCSVAPDIGSLFGLRMLAGAAAGGCIPLSLALLGDRVPMESRQVAIGRFLVAVILGQLSG HHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC STFAGLIEAAIGWRGVFAVTAAVAALACAATVFGFDRAGRAPARRPAFGEAVTRYRTILR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH NPRARVLFAAVFIEAIAIFGVFPHLAPLIEARGEGGPREAGLVLAGFAVGGLLYSALVGL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LVRLLGLPRMLIGGGLICGASLTVVGLAGSWQVDCAALTAMGLGFYMLHNTYQTQVTEVA HHHHHCCCHHHHCCCHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH PKARASAVALHAFSFFCGQALGVAVIGQALLRLGQLGALLGCAVTILALGIATAIALRQK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PAPVAFPS CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377 [H]