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The map label for this gene is omp31 [H]

Identifier: 170749946

GI number: 170749946

Start: 3766541

End: 3767278

Strand: Reverse

Name: omp31 [H]

Synonym: Mrad2831_3546

Alternate gene names: 170749946

Gene position: 3767278-3766541 (Counterclockwise)

Preceding gene: 170749947

Following gene: 170749945

Centisome position: 61.98

GC content: 71.54

Gene sequence:

>738_bases
ATGAACGCTCGAATTCACGCAGCCCTCGCGGGCGCCGCTTTCGGCTGCCTGGCCCTCGCCGCCCAGGCGGCGGATCTGCC
CCGCCGCGCGCCGCCGCCGCCGCCGCCGTCGCTGCCGGTCTTCACCTGGACCGGCTTCTACGCCGGCGTGAACGCCGGGT
ACGCGTTCCCGACCGGCAGCGGCGGCTTCACCGACCCCACCTACGGCACCGTCACGGGCGGCGGCCGGTCCGGCGGCTTC
GCCGGCGGCGGCCAGGTCGGCTACAACTATCAGTTCACGCCGGGTTCCGGCGTCGTCGTCGGCGTCGAGACCGACATCCA
GGGGACGGCCTTCGCCAAGGCGGACGCCGCCTATCTCGGCACCGCGCCGTACTACAGCGTCCGACCGAGCCTCGACTATT
TCGGCACGGTCCGCGCCCGGCTCGGCTACGCGTTCGACCGGGTCCTCGTCTACGGCACCGGCGGCTTCGCGTACGGCGGC
GGGGCGCGCTCGACCTACGCGGCCTCCTACCCCTACACCCTGCCGTCGACCGACCGGACCGGCTACGCGGCCGGCGGCGG
CATCGAGTACGCCTTCACCGAGAAGCTCTCCGCCAAGGTGGAGGCCCTCTACCTCCATCTCGGCCGCGGAACGACCGCCG
CCACGTACTACAACGCCAGTGTTCCGGCATTTTATGGCGCCGGCAAACAGGATTCCGGCCTCGCGTTGGTCCGGGCCGGT
GTGAATTACCGATTCTGA

Upstream 100 bases:

>100_bases
CGATCTCGCCCTCTGCCTGATCCTGTCCGTGACCGTCGTCGGCCTGCTCCTCCTGGCCCTCTGATCCTGCGGCGCCGCCG
CGTTCCAGAACGAGACACCC

Downstream 100 bases:

>100_bases
GTAGTATTCGCAGGCCGAGAGCTTGACGGGACGGTCGAGCTGGGCCGCAATGCCCGGCGTTCCGCTTCGCGAATCCGTCG
GCCGCGCGAGCCTGTCCACG

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MNARIHAALAGAAFGCLALAAQAADLPRRAPPPPPPSLPVFTWTGFYAGVNAGYAFPTGSGGFTDPTYGTVTGGGRSGGF
AGGGQVGYNYQFTPGSGVVVGVETDIQGTAFAKADAAYLGTAPYYSVRPSLDYFGTVRARLGYAFDRVLVYGTGGFAYGG
GARSTYAASYPYTLPSTDRTGYAAGGGIEYAFTEKLSAKVEALYLHLGRGTTAATYYNASVPAFYGAGKQDSGLALVRAG
VNYRF

Sequences:

>Translated_245_residues
MNARIHAALAGAAFGCLALAAQAADLPRRAPPPPPPSLPVFTWTGFYAGVNAGYAFPTGSGGFTDPTYGTVTGGGRSGGF
AGGGQVGYNYQFTPGSGVVVGVETDIQGTAFAKADAAYLGTAPYYSVRPSLDYFGTVRARLGYAFDRVLVYGTGGFAYGG
GARSTYAASYPYTLPSTDRTGYAAGGGIEYAFTEKLSAKVEALYLHLGRGTTAATYYNASVPAFYGAGKQDSGLALVRAG
VNYRF
>Mature_245_residues
MNARIHAALAGAAFGCLALAAQAADLPRRAPPPPPPSLPVFTWTGFYAGVNAGYAFPTGSGGFTDPTYGTVTGGGRSGGF
AGGGQVGYNYQFTPGSGVVVGVETDIQGTAFAKADAAYLGTAPYYSVRPSLDYFGTVRARLGYAFDRVLVYGTGGFAYGG
GARSTYAASYPYTLPSTDRTGYAAGGGIEYAFTEKLSAKVEALYLHLGRGTTAATYYNASVPAFYGAGKQDSGLALVRAG
VNYRF

Specific function: Major outer membrane protein associated with peptidoglycans. May function as a porin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 25195; Mature: 25195

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNARIHAALAGAAFGCLALAAQAADLPRRAPPPPPPSLPVFTWTGFYAGVNAGYAFPTGS
CCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECEECCCCCCEECCCCC
GGFTDPTYGTVTGGGRSGGFAGGGQVGYNYQFTPGSGVVVGVETDIQGTAFAKADAAYLG
CCCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCEEECCCCEEEC
TAPYYSVRPSLDYFGTVRARLGYAFDRVLVYGTGGFAYGGGARSTYAASYPYTLPSTDRT
CCCCEEECCCCCHHHHHHHHHHHEEEEEEEEECCCEEECCCCCCCEEECCCEECCCCCCC
GYAAGGGIEYAFTEKLSAKVEALYLHLGRGTTAATYYNASVPAFYGAGKQDSGLALVRAG
CEECCCCEEEEEHHHHHHEEEEEEEECCCCCEEEEEECCCCCEEECCCCCCCCEEEEEEC
VNYRF
CCCCC
>Mature Secondary Structure
MNARIHAALAGAAFGCLALAAQAADLPRRAPPPPPPSLPVFTWTGFYAGVNAGYAFPTGS
CCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECEECCCCCCEECCCCC
GGFTDPTYGTVTGGGRSGGFAGGGQVGYNYQFTPGSGVVVGVETDIQGTAFAKADAAYLG
CCCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCEEECCCCEEEC
TAPYYSVRPSLDYFGTVRARLGYAFDRVLVYGTGGFAYGGGARSTYAASYPYTLPSTDRT
CCCCEEECCCCCHHHHHHHHHHHEEEEEEEEECCCEEECCCCCCCEEECCCEECCCCCCC
GYAAGGGIEYAFTEKLSAKVEALYLHLGRGTTAATYYNASVPAFYGAGKQDSGLALVRAG
CEECCCCEEEEEHHHHHHEEEEEEEECCCCCEEEEEECCCCCEEECCCCCCCCEEEEEEC
VNYRF
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8751924; 11756688 [H]