| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170749865
Identifier: 170749865
GI number: 170749865
Start: 3679904
End: 3681097
Strand: Direct
Name: 170749865
Synonym: Mrad2831_3465
Alternate gene names: NA
Gene position: 3679904-3681097 (Clockwise)
Preceding gene: 170749863
Following gene: 170749866
Centisome position: 60.55
GC content: 73.45
Gene sequence:
>1194_bases GTGACGCGCCTCGACGATCTCGAACGGCCCGGCGCCGCGGCCCCGCGGGCGCTTCCCCCGCCGCCCGCCGGGGCACCGCC CGCGAAGCCCGTGCGCGACGCGCGGGTCGACGTCGTGCGCGGCCTCGCGCTCCTGACGATCTTCATCGACCACATCCCGC GCAACGCGCCGGCCCTGCTGACGCTGCACAATTTCGGGTTCTCGGACGCGGCCGAGATCTTCGTCCTGCTGGCCGGCTAC TCGTCGATGATCGCCTACGGCGGGCTGTTCCGGCGGGCCGGGATCCGGACGGCGCTCACGCGCATCGCCAAGCGCTGCCT GCGCATCTACCTGTTCCAGGCCGGACTGCTGCTGGCGACCCTGGTCATCGTGCGGATCTGGATGGACCTCACCGGCCTGA CGCCGCGATTCGGCGTCGCGCCCCTGCTGCAGATGGGGCTCCTGCCGGGCCTGCTGCGCGGCCTCGCGCTGAACGCGCTG CCGAACTACCTCGACATCCTGCCGCTCTACATCCTGCTGCTGGCGCTGTTCCCGCTGATCTATCTCGGGATGCGGCGCGG GATCTGGGGCGTGCTGGGCCTGTCGGGGGCGCTCTGGCTCGCCGCCAACGTCGACCATCAGCTGAACCTCCCGAACGCCG CGGCGGTGGACGACGGGTGGTACTTCAACCCCTTCGCGTGGCAGTTCCTGTTCGTGATCGGCGCGGCGCTCGCGGTCGCG GTCCGCGCCCATGACGGCCTGCTGCCGCGGCGCGGCTGGGCCGTGGCCGCGGCCGCCGCCTACCTCGCCTTCGCCTTCCT GCAGGGCGGGTCCTGGGCGGAGTGGGGACTTCCCGATCTCCGGCCGCTGGGGATCGGGCCGCCCGACAAGGGCCACGTCG CGCCCCTGCGCCTGATCAACATGCTGGCGCTGGCCTACCTGCTGTTCAGCATGCCCGCCGCGGCGCGCGCGAGCCGGTGG CGGGGGCTGCGCCTCGTCGACGCCTGCGGCCGGCACTCGCTGGAGATCTTCGCGGCCGGGTGCCTGGCGGCGCTGATCGG CCGCATCCTCTACCGGACCTTCGACCCCACTTGGCCGCTGCAGGTCGCGGTCAATGTCGGGGGGATCGCGGTCATGCTCG GCCTGGCGCACCTGCTGGACGCGCGCCTCCGCCGGGCCACCGAGACCGGCCCCGACGCGCGCCGGCCCGGATAG
Upstream 100 bases:
>100_bases GCACGTGATCGGCGGCCTCCCGGGCGGCGCGCGCGCTATTGTTCCACCGCGGCTCCGGCCGCTCCGCGTCCGGACGGAGA GCGCCACGGTGATGGGCTGA
Downstream 100 bases:
>100_bases GCCGGGAGGAGCGACGATGCCGCCGATGCGCCGCAAGGGCGATCTGCCGGAGAAGATCTGCGCCCAGTGCGGCCGCCCGT TCGCGTGGCGCAAGAAGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Transmembrane Protein OpgC
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MTRLDDLERPGAAAPRALPPPPAGAPPAKPVRDARVDVVRGLALLTIFIDHIPRNAPALLTLHNFGFSDAAEIFVLLAGY SSMIAYGGLFRRAGIRTALTRIAKRCLRIYLFQAGLLLATLVIVRIWMDLTGLTPRFGVAPLLQMGLLPGLLRGLALNAL PNYLDILPLYILLLALFPLIYLGMRRGIWGVLGLSGALWLAANVDHQLNLPNAAAVDDGWYFNPFAWQFLFVIGAALAVA VRAHDGLLPRRGWAVAAAAAYLAFAFLQGGSWAEWGLPDLRPLGIGPPDKGHVAPLRLINMLALAYLLFSMPAAARASRW RGLRLVDACGRHSLEIFAAGCLAALIGRILYRTFDPTWPLQVAVNVGGIAVMLGLAHLLDARLRRATETGPDARRPG
Sequences:
>Translated_397_residues MTRLDDLERPGAAAPRALPPPPAGAPPAKPVRDARVDVVRGLALLTIFIDHIPRNAPALLTLHNFGFSDAAEIFVLLAGY SSMIAYGGLFRRAGIRTALTRIAKRCLRIYLFQAGLLLATLVIVRIWMDLTGLTPRFGVAPLLQMGLLPGLLRGLALNAL PNYLDILPLYILLLALFPLIYLGMRRGIWGVLGLSGALWLAANVDHQLNLPNAAAVDDGWYFNPFAWQFLFVIGAALAVA VRAHDGLLPRRGWAVAAAAAYLAFAFLQGGSWAEWGLPDLRPLGIGPPDKGHVAPLRLINMLALAYLLFSMPAAARASRW RGLRLVDACGRHSLEIFAAGCLAALIGRILYRTFDPTWPLQVAVNVGGIAVMLGLAHLLDARLRRATETGPDARRPG >Mature_396_residues TRLDDLERPGAAAPRALPPPPAGAPPAKPVRDARVDVVRGLALLTIFIDHIPRNAPALLTLHNFGFSDAAEIFVLLAGYS SMIAYGGLFRRAGIRTALTRIAKRCLRIYLFQAGLLLATLVIVRIWMDLTGLTPRFGVAPLLQMGLLPGLLRGLALNALP NYLDILPLYILLLALFPLIYLGMRRGIWGVLGLSGALWLAANVDHQLNLPNAAAVDDGWYFNPFAWQFLFVIGAALAVAV RAHDGLLPRRGWAVAAAAAYLAFAFLQGGSWAEWGLPDLRPLGIGPPDKGHVAPLRLINMLALAYLLFSMPAAARASRWR GLRLVDACGRHSLEIFAAGCLAALIGRILYRTFDPTWPLQVAVNVGGIAVMLGLAHLLDARLRRATETGPDARRPG
Specific function: Unknown
COG id: COG4645
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42886; Mature: 42755
Theoretical pI: Translated: 10.88; Mature: 10.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLDDLERPGAAAPRALPPPPAGAPPAKPVRDARVDVVRGLALLTIFIDHIPRNAPALL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE TLHNFGFSDAAEIFVLLAGYSSMIAYGGLFRRAGIRTALTRIAKRCLRIYLFQAGLLLAT EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVIVRIWMDLTGLTPRFGVAPLLQMGLLPGLLRGLALNALPNYLDILPLYILLLALFPLI HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLGMRRGIWGVLGLSGALWLAANVDHQLNLPNAAAVDDGWYFNPFAWQFLFVIGAALAVA HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VRAHDGLLPRRGWAVAAAAAYLAFAFLQGGSWAEWGLPDLRPLGIGPPDKGHVAPLRLIN HHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH MLALAYLLFSMPAAARASRWRGLRLVDACGRHSLEIFAAGCLAALIGRILYRTFDPTWPL HHHHHHHHHHCCHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCE QVAVNVGGIAVMLGLAHLLDARLRRATETGPDARRPG EEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TRLDDLERPGAAAPRALPPPPAGAPPAKPVRDARVDVVRGLALLTIFIDHIPRNAPALL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE TLHNFGFSDAAEIFVLLAGYSSMIAYGGLFRRAGIRTALTRIAKRCLRIYLFQAGLLLAT EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVIVRIWMDLTGLTPRFGVAPLLQMGLLPGLLRGLALNALPNYLDILPLYILLLALFPLI HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLGMRRGIWGVLGLSGALWLAANVDHQLNLPNAAAVDDGWYFNPFAWQFLFVIGAALAVA HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VRAHDGLLPRRGWAVAAAAAYLAFAFLQGGSWAEWGLPDLRPLGIGPPDKGHVAPLRLIN HHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH MLALAYLLFSMPAAARASRWRGLRLVDACGRHSLEIFAAGCLAALIGRILYRTFDPTWPL HHHHHHHHHHCCHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCE QVAVNVGGIAVMLGLAHLLDARLRRATETGPDARRPG EEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA