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The map label for this gene is ygbL [C]

Identifier: 170749756

GI number: 170749756

Start: 3562368

End: 3563156

Strand: Direct

Name: ygbL [C]

Synonym: Mrad2831_3355

Alternate gene names: 170749756

Gene position: 3562368-3563156 (Clockwise)

Preceding gene: 170749755

Following gene: 170749758

Centisome position: 58.61

GC content: 73.0

Gene sequence:

>789_bases
ATGGCGCACGCCGTTACCGCCCCGGGGACCCCGCCGGCCCGCAGCAACGAGCCCCTGAACGCCGACAGCGTGCGCCGCGC
CCGGATCGACCTCGCCGCCTGCCTGCGCTGGGCCGCCCGCCACGGCCTGGAAGAGGGCATCTGCAACCACTTCTCGGCGG
TGCTGCCGGAGCGGCCCGACCTGTTCCTGGTCAATCCCTACGGCCTCGCCTTCGCGGAGGTCACCGCGTCGAGCCTGCTG
CTCTGCGACTTCCACGGCAACGTCATCGAGGGCGACGGCCAGCCGGAGGCCACCGCCTTCCACATCCACGCCGAACTGCA
CCGGCTGAAGCCCCGGGCCCGGGCCGCGTTCCACACCCACATGCCTTACGCGACGGCCCTCGCCATGCTGGAGGGCGAGC
CGCTGCTGTGGGCGGGCCAGACCGCCCTGCGCTTCTACGGCCGCATCGCGGTGGACGAGGATTACAACGGACTGGCGCTC
GACGCGTCCGAGGGCCGGCGGATCGCCGAGAGCGCCGGCGATGCGGACGTGGTGTTCCTGAAGAACCACGGCGTGATGGT
GCTGGGCGAGACCATCGCGGAGGCCTGGGACGACCTCTACTACCTGGAGCGCGCCGCGCAGGCGCAGGTCCTGGCCATGA
GCACGGGGCGCGCGCTCAAGGCCGTGCCCGAGGCGATCGTGAAGCACGTGGCGGCCCAGGAGGCGGCCGGCCGCGCCGAG
AGCGCGCGGCTGCACCTGGAGAGCGTCAAGCGGGTGCTCGCCCGGGACGAGCCCGCCTTCCTGGCGTGA

Upstream 100 bases:

>100_bases
CGGCCGCGCCTGAGCGCTTGGCGGCTGCGCGCGAGCGTCTAGAGTGCGGCCCCGGCCGGGTCGCCCGGCCCGATCCCTTT
ACACAGGAAAGCCCGCACGC

Downstream 100 bases:

>100_bases
GCGCCCGTTAGGGCGCGGCCCGGACCCGGTCCAGCAGCGCGGCGTCGGCGTAGCCGTCCGGCGGCAGGCCGACCGACCCC
TGGAAGGCGCGCAGCGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MAHAVTAPGTPPARSNEPLNADSVRRARIDLAACLRWAARHGLEEGICNHFSAVLPERPDLFLVNPYGLAFAEVTASSLL
LCDFHGNVIEGDGQPEATAFHIHAELHRLKPRARAAFHTHMPYATALAMLEGEPLLWAGQTALRFYGRIAVDEDYNGLAL
DASEGRRIAESAGDADVVFLKNHGVMVLGETIAEAWDDLYYLERAAQAQVLAMSTGRALKAVPEAIVKHVAAQEAAGRAE
SARLHLESVKRVLARDEPAFLA

Sequences:

>Translated_262_residues
MAHAVTAPGTPPARSNEPLNADSVRRARIDLAACLRWAARHGLEEGICNHFSAVLPERPDLFLVNPYGLAFAEVTASSLL
LCDFHGNVIEGDGQPEATAFHIHAELHRLKPRARAAFHTHMPYATALAMLEGEPLLWAGQTALRFYGRIAVDEDYNGLAL
DASEGRRIAESAGDADVVFLKNHGVMVLGETIAEAWDDLYYLERAAQAQVLAMSTGRALKAVPEAIVKHVAAQEAAGRAE
SARLHLESVKRVLARDEPAFLA
>Mature_261_residues
AHAVTAPGTPPARSNEPLNADSVRRARIDLAACLRWAARHGLEEGICNHFSAVLPERPDLFLVNPYGLAFAEVTASSLLL
CDFHGNVIEGDGQPEATAFHIHAELHRLKPRARAAFHTHMPYATALAMLEGEPLLWAGQTALRFYGRIAVDEDYNGLALD
ASEGRRIAESAGDADVVFLKNHGVMVLGETIAEAWDDLYYLERAAQAQVLAMSTGRALKAVPEAIVKHVAAQEAAGRAES
ARLHLESVKRVLARDEPAFLA

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family [H]

Homologues:

Organism=Homo sapiens, GI29826323, Length=195, Percent_Identity=29.7435897435897, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI29826325, Length=195, Percent_Identity=29.7435897435897, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI29826321, Length=195, Percent_Identity=29.7435897435897, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI29826319, Length=195, Percent_Identity=29.7435897435897, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI89276787, Length=195, Percent_Identity=27.6923076923077, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI297307160, Length=195, Percent_Identity=27.6923076923077, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI9257190, Length=228, Percent_Identity=27.1929824561404, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI297307158, Length=196, Percent_Identity=29.0816326530612, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI9257192, Length=196, Percent_Identity=29.0816326530612, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI9943848, Length=193, Percent_Identity=26.9430051813472, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI9951927, Length=193, Percent_Identity=26.9430051813472, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI62912453, Length=193, Percent_Identity=26.9430051813472, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI115533216, Length=227, Percent_Identity=27.3127753303965, Blast_Score=91, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI115533218, Length=227, Percent_Identity=27.3127753303965, Blast_Score=91, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI71989560, Length=244, Percent_Identity=27.4590163934426, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI71989541, Length=189, Percent_Identity=29.6296296296296, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI71989555, Length=244, Percent_Identity=28.2786885245902, Blast_Score=78, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI71989550, Length=245, Percent_Identity=28.1632653061224, Blast_Score=78, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI71989544, Length=218, Percent_Identity=28.8990825688073, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI281363755, Length=211, Percent_Identity=29.8578199052133, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI281363751, Length=211, Percent_Identity=29.8578199052133, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24655690, Length=211, Percent_Identity=29.8578199052133, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24655685, Length=211, Percent_Identity=29.8578199052133, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI281363761, Length=211, Percent_Identity=29.8578199052133, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI281363759, Length=211, Percent_Identity=29.8578199052133, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI281363753, Length=211, Percent_Identity=29.8578199052133, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI281363763, Length=211, Percent_Identity=29.8578199052133, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI281363757, Length=211, Percent_Identity=29.8578199052133, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI17136738, Length=211, Percent_Identity=29.8578199052133, Blast_Score=75, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 28384; Mature: 28253

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHAVTAPGTPPARSNEPLNADSVRRARIDLAACLRWAARHGLEEGICNHFSAVLPERPD
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC
LFLVNPYGLAFAEVTASSLLLCDFHGNVIEGDGQPEATAFHIHAELHRLKPRARAAFHTH
EEEECCCCHHHHHHHHCEEEEEECCCCEEECCCCCCCEEEEEEHHHHHCCHHHHHHHHHC
MPYATALAMLEGEPLLWAGQTALRFYGRIAVDEDYNGLALDASEGRRIAESAGDADVVFL
CCHHHHHHHHCCCCEEEECHHHHHHHEEEEECCCCCCEEEECCCCCHHHHCCCCCEEEEE
KNHGVMVLGETIAEAWDDLYYLERAAQAQVLAMSTGRALKAVPEAIVKHVAAQEAAGRAE
ECCCEEEEHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHH
SARLHLESVKRVLARDEPAFLA
HHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AHAVTAPGTPPARSNEPLNADSVRRARIDLAACLRWAARHGLEEGICNHFSAVLPERPD
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC
LFLVNPYGLAFAEVTASSLLLCDFHGNVIEGDGQPEATAFHIHAELHRLKPRARAAFHTH
EEEECCCCHHHHHHHHCEEEEEECCCCEEECCCCCCCEEEEEEHHHHHCCHHHHHHHHHC
MPYATALAMLEGEPLLWAGQTALRFYGRIAVDEDYNGLALDASEGRRIAESAGDADVVFL
CCHHHHHHHHCCCCEEEECHHHHHHHEEEEECCCCCCEEEECCCCCHHHHCCCCCEEEEE
KNHGVMVLGETIAEAWDDLYYLERAAQAQVLAMSTGRALKAVPEAIVKHVAAQEAAGRAE
ECCCEEEEHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHH
SARLHLESVKRVLARDEPAFLA
HHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]