| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yaiI [C]
Identifier: 170749575
GI number: 170749575
Start: 3349139
End: 3349618
Strand: Reverse
Name: yaiI [C]
Synonym: Mrad2831_3170
Alternate gene names: 170749575
Gene position: 3349618-3349139 (Counterclockwise)
Preceding gene: 170749576
Following gene: 170749567
Centisome position: 55.11
GC content: 72.29
Gene sequence:
>480_bases ATGAGTGTCGCGCCGCGCCCGCCGATCTACCTCGACGCCGACGCCTGCCCGGTCAAGGACGAGACCTACCGGGTCGCCGA ACGCTACGGCCTGACCGTCCACGTCGTCGCCAACAGCGTGCTGAACCTTCCGCGCGAGCCCTGGATCGAGCGGGTGGTCG TCGGCCCGGAACTCGATGCCGCCGACGACTGGATCGCCGCGCGGGCCGGGCCCGGGAGCATCGTGCTCACCGCCGACGTC CCGCTGGCCGCGCGCTGCGTGAAGGCCGGGGCCACGGTCCTGGCGTTCACCGGCAAGCCGTTCAGCGAGGCCGGGATCGG CCTCGCCCTCGCCACCCGCGACTTGATGCAATCGTTGCGCGAGGCCGGCACCATCACGGGCGGGCCGAAGCCCTTCTCGC GCGCCGATCGGTCGGCATTCCTGTCAGCCCTCGACCGGGCGGTGAACCGGATCCTTCGCGAGCGGCCGAAGCCGGTCTGA
Upstream 100 bases:
>100_bases CCATCGTGCTGTCGGTGGGCGGCGATATCGAGCACGGGCAGTTCGCCCTGGGCGTGCTCCTCATCCTGGCAGGCTTCACC TCGAAGCTTGTACCCCGCCC
Downstream 100 bases:
>100_bases GCGCCTGTTCCGGGATCGAGGGCTTCCTGGCCCGACGGCTTTCAGGCCTCGGCCGCCGGGACGAGGGCCTTGAGCGCCTC GTTGATGCGGTCCTGCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MSVAPRPPIYLDADACPVKDETYRVAERYGLTVHVVANSVLNLPREPWIERVVVGPELDAADDWIAARAGPGSIVLTADV PLAARCVKAGATVLAFTGKPFSEAGIGLALATRDLMQSLREAGTITGGPKPFSRADRSAFLSALDRAVNRILRERPKPV
Sequences:
>Translated_159_residues MSVAPRPPIYLDADACPVKDETYRVAERYGLTVHVVANSVLNLPREPWIERVVVGPELDAADDWIAARAGPGSIVLTADV PLAARCVKAGATVLAFTGKPFSEAGIGLALATRDLMQSLREAGTITGGPKPFSRADRSAFLSALDRAVNRILRERPKPV >Mature_158_residues SVAPRPPIYLDADACPVKDETYRVAERYGLTVHVVANSVLNLPREPWIERVVVGPELDAADDWIAARAGPGSIVLTADVP LAARCVKAGATVLAFTGKPFSEAGIGLALATRDLMQSLREAGTITGGPKPFSRADRSAFLSALDRAVNRILRERPKPV
Specific function: Unknown
COG id: COG1671
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0178 family [H]
Homologues:
Organism=Escherichia coli, GI87081732, Length=149, Percent_Identity=38.9261744966443, Blast_Score=100, Evalue=5e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003791 [H]
Pfam domain/function: PF02639 DUF188 [H]
EC number: NA
Molecular weight: Translated: 16987; Mature: 16856
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVAPRPPIYLDADACPVKDETYRVAERYGLTVHVVANSVLNLPREPWIERVVVGPELDA CCCCCCCCEEECCCCCCCCCHHHHHHHHHCCEEEEEHHHHHCCCCCCHHHEEEECCCCCC ADDWIAARAGPGSIVLTADVPLAARCVKAGATVLAFTGKPFSEAGIGLALATRDLMQSLR CCCCEEECCCCCCEEEEECCCHHHHHHHCCCEEEEECCCCCHHHCCCHHHHHHHHHHHHH EAGTITGGPKPFSRADRSAFLSALDRAVNRILRERPKPV HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SVAPRPPIYLDADACPVKDETYRVAERYGLTVHVVANSVLNLPREPWIERVVVGPELDA CCCCCCCEEECCCCCCCCCHHHHHHHHHCCEEEEEHHHHHCCCCCCHHHEEEECCCCCC ADDWIAARAGPGSIVLTADVPLAARCVKAGATVLAFTGKPFSEAGIGLALATRDLMQSLR CCCCEEECCCCCCEEEEECCCHHHHHHHCCCEEEEECCCCCHHHCCCHHHHHHHHHHHHH EAGTITGGPKPFSRADRSAFLSALDRAVNRILRERPKPV HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA