Click here to switch to the map view.

The map label for this gene is rsmI [H]

Identifier: 170749346

GI number: 170749346

Start: 3097573

End: 3098544

Strand: Reverse

Name: rsmI [H]

Synonym: Mrad2831_2939

Alternate gene names: 170749346

Gene position: 3098544-3097573 (Counterclockwise)

Preceding gene: 170749348

Following gene: 170749345

Centisome position: 50.98

GC content: 73.25

Gene sequence:

>972_bases
ATGACCCGCAGATTCGACGACCCGGGGCCCGCCGCCTCGACCCGAGCTCCGTCACAGAAGCTCGCCCCCGACCGGCCGCG
CAGCACGACCTTCACGGCCTTCGGGCTCGCGAGCGAGACAGAGCCCCTGTCCCCGGGCCTGCACATCGTGGCGACCCCGA
TCGGGAACCTGCGCGACATCACCATCCGGGCGCTGGCCACCCTGGCGGCGGCCGACGCGGTCCTGGCCGAGGACACCCGC
GTCACCCGGAACCTGCTGGCGCATTACGGGATCACGACGCCGCTCCTGGCCTATCACGAGCATTCCAACGACGCGGTGCG
CGAGCGGATGGTGGCGCGGCTGCGCGCCGGCGAGGCCCTGGCGCTGGTCTCGGATGCCGGGACCCCGCTCGTCTCGGATC
CCGGCTACAAGCTGGTCCAGGCCGCCATCGAGGCCGGGATCGCCATCACGCCCGTCCCGGGGCCATCCGCGGTGATGACG
GCGCTGGTCGCGGCGGGCCTGCCGACGGATCGCTTCTTCTTCGAGGGCTTCCTGCCGCAGAAGGCCGGAGCGCGGCGCAA
CCGCCTCGAGGCGCTGCTCCAGGTTCCCGGCACGCTGGTCCTGTTCGAGTCGCCGCATCGCCTGCCCGACATGCTGGCGG
ACGCCGCCGCGGTGCTCGGTTCGGAGCGGCCCGCCGCCGTGACCCGCGAGCTGACCAAGCTCTACGAAACCATCCGGCGC
GATACGCTGGGCAGCCTGAGCGCGCGCTTCGCCCAGGAAGGACCGCCGAAGGGGGAGATCGTGGTGATCATCGGTGCGGC
GACGGCGCCGGAGCGGACCGCGGACACGGACGCCGCCCTCGACGCCCTGATCCTGGCGGCCCTGGAGCGGCACTCGATCA
AGGATGCCGCCAGCCTCGTGTCCGACGAGACCGGGCAGCCGCGGCGCCTCGTCTACGCGCGCGCGCTGGCGCTGGCGCGG
GACCCGGGATGA

Upstream 100 bases:

>100_bases
ACCGGCACGATCCCAAATGTAAACGCGGCGGCCCGGACTTGCCCCCGGTCGCGCGGCCCCGCCGCGACGAGAGGCGGCGG
GTGTGGCAAGATCGCCGGCG

Downstream 100 bases:

>100_bases
CCGGGGCTCTGCCGGACGGGGCCGACCGGCGCCGCGCCGCCTATCGGTTCGGCCACCGGGCCGAGTGGTTGGCGCTCGCC
GCGCTGATGCTGAAAGGCTA

Product: uroporphyrin-III C/tetrapyrrole methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MTRRFDDPGPAASTRAPSQKLAPDRPRSTTFTAFGLASETEPLSPGLHIVATPIGNLRDITIRALATLAAADAVLAEDTR
VTRNLLAHYGITTPLLAYHEHSNDAVRERMVARLRAGEALALVSDAGTPLVSDPGYKLVQAAIEAGIAITPVPGPSAVMT
ALVAAGLPTDRFFFEGFLPQKAGARRNRLEALLQVPGTLVLFESPHRLPDMLADAAAVLGSERPAAVTRELTKLYETIRR
DTLGSLSARFAQEGPPKGEIVVIIGAATAPERTADTDAALDALILAALERHSIKDAASLVSDETGQPRRLVYARALALAR
DPG

Sequences:

>Translated_323_residues
MTRRFDDPGPAASTRAPSQKLAPDRPRSTTFTAFGLASETEPLSPGLHIVATPIGNLRDITIRALATLAAADAVLAEDTR
VTRNLLAHYGITTPLLAYHEHSNDAVRERMVARLRAGEALALVSDAGTPLVSDPGYKLVQAAIEAGIAITPVPGPSAVMT
ALVAAGLPTDRFFFEGFLPQKAGARRNRLEALLQVPGTLVLFESPHRLPDMLADAAAVLGSERPAAVTRELTKLYETIRR
DTLGSLSARFAQEGPPKGEIVVIIGAATAPERTADTDAALDALILAALERHSIKDAASLVSDETGQPRRLVYARALALAR
DPG
>Mature_322_residues
TRRFDDPGPAASTRAPSQKLAPDRPRSTTFTAFGLASETEPLSPGLHIVATPIGNLRDITIRALATLAAADAVLAEDTRV
TRNLLAHYGITTPLLAYHEHSNDAVRERMVARLRAGEALALVSDAGTPLVSDPGYKLVQAAIEAGIAITPVPGPSAVMTA
LVAAGLPTDRFFFEGFLPQKAGARRNRLEALLQVPGTLVLFESPHRLPDMLADAAAVLGSERPAAVTRELTKLYETIRRD
TLGSLSARFAQEGPPKGEIVVIIGAATAPERTADTDAALDALILAALERHSIKDAASLVSDETGQPRRLVYARALALARD
PG

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=233, Percent_Identity=51.5021459227468, Blast_Score=224, Evalue=7e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 34163; Mature: 34032

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRFDDPGPAASTRAPSQKLAPDRPRSTTFTAFGLASETEPLSPGLHIVATPIGNLRDI
CCCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCHHH
TIRALATLAAADAVLAEDTRVTRNLLAHYGITTPLLAYHEHSNDAVRERMVARLRAGEAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCEE
ALVSDAGTPLVSDPGYKLVQAAIEAGIAITPVPGPSAVMTALVAAGLPTDRFFFEGFLPQ
EEEECCCCCCCCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHHCCCCHHHHHHCCCCC
KAGARRNRLEALLQVPGTLVLFESPHRLPDMLADAAAVLGSERPAAVTRELTKLYETIRR
CCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
DTLGSLSARFAQEGPPKGEIVVIIGAATAPERTADTDAALDALILAALERHSIKDAASLV
HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SDETGQPRRLVYARALALARDPG
HCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TRRFDDPGPAASTRAPSQKLAPDRPRSTTFTAFGLASETEPLSPGLHIVATPIGNLRDI
CCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCHHH
TIRALATLAAADAVLAEDTRVTRNLLAHYGITTPLLAYHEHSNDAVRERMVARLRAGEAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCEE
ALVSDAGTPLVSDPGYKLVQAAIEAGIAITPVPGPSAVMTALVAAGLPTDRFFFEGFLPQ
EEEECCCCCCCCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHHCCCCHHHHHHCCCCC
KAGARRNRLEALLQVPGTLVLFESPHRLPDMLADAAAVLGSERPAAVTRELTKLYETIRR
CCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
DTLGSLSARFAQEGPPKGEIVVIIGAATAPERTADTDAALDALILAALERHSIKDAASLV
HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SDETGQPRRLVYARALALARDPG
HCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]