| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is ydeG [H]
Identifier: 170749180
GI number: 170749180
Start: 2910976
End: 2912205
Strand: Reverse
Name: ydeG [H]
Synonym: Mrad2831_2773
Alternate gene names: 170749180
Gene position: 2912205-2910976 (Counterclockwise)
Preceding gene: 170749181
Following gene: 170749176
Centisome position: 47.92
GC content: 72.28
Gene sequence:
>1230_bases ATGTCCCGCACGTCCCCTACGGCCATCGCCCTCGAACCCGTCGCCGCCGAACGGTCGGGGACCGGCAACGTGGTCCGACT GGCCGTCGCGCAGGCCCTCGCCGGGGCGAACTCGACAGTCGTGTTCGCGACGGGCGCGGTCGTCGGCAACATGCTCGCTC CCAGCAAGGTCCTCGCCACGCTGCCGATCTCGATCTTCGTCGTCGGGATGGCCGCCTGCGCCCTGCCGACCGGCAGCATC GCCAGGCGCTACGGGCGCCGCACCGTCTTCATGGTCGGCACCGGCTGCGGTGTGCTCGTCGGCCTGCTCTCGGCCTGGGC GATCGTCGCGGCCGACTTCTGGCTGTTCTGCGCGGCGATGTTCCTCGGCGGCGCCTACGCCGCCGTGGTCTTCTCGTTCC GCTTCGCCGCGGCGGACTGCGTTCCGGCCGAACGGCGGCCGCGGGCGCTGTCGGCGGTCATGGCGGGCGGCGTCTTCGGC GGCGTGATCGGGCCGCAGCTCGTCACCCACACCATGAACCTGTCGCCCCCCCACCTGTTCGCGGCCACCTTCCTGGCCCA GGCGGCCGTCGCCGGTGCGGCCGCCCTCGTCCTGGCGGGCGTTCGCCTGCCGCGGCCGGCCGCAGAGACCGTCTCAGGCG GGCGACCGCTGGCCGTCATCCTGGCGCAGCCGCGCTTCGTGATCGCGGTGATCTGCGGGGCCGTGTCCTACCTGCTGATG AATTTCGTGATGACGGCCGCCCCGCTGGCCATGCGCCTGTGCGGTCACGCGCAGGAGGATGCCAATCTCGGCCTGCAATG GCACGTCATCGCCATGTACGGTCCGAGCTTCTTCACCGGGCGGCTGATCACGCGCTTCGGCGCGTCCCGCGTGGTGGCGA CCGGCCTCGCCTTGACGGGCGCGGCCGCGCTCGTCGGGCTCGCCGGCGCGGATGTCGGCCATTTCTGGCTGTCCCTCGTC CTCCTCGGCGTCGGCTGGAACTTCGGCTTCGTCGGCGCCTCCGCAATGGTGCTGGACTGCCATCGCCCGGAGGAGCGGAC GCGGGTGCAGTCGATCAACGACTTCATCGTGTTCGGGATGGTGGCCCTGGGCTCATTCTCGTCCGGCGGCCTTCTGACGA GCTACGGCTGGGACACGGTTCTCTGGGTCTCGTTCGCGCCCCTGGCGCTGGCCGCGACGGCGCTCGCACGCACGACGGCG CGCGGCGCGCCGCGGCCCGGCGGAGCATGA
Upstream 100 bases:
>100_bases CGATGCGCCCGTCGGACCCGATCCGTCCGCGGTCGACCCCGGGCATCGCGGGTCGCCGCTCCGCCCGACCGTGGCGACCC ACCGAGACCCGAGCCTCCCG
Downstream 100 bases:
>100_bases GCGCGGCGCGGCGGCCGGGCCCCGAACGGACCCCGCGGACGCGTGCCCCGACGGTCGCGGAGTCGGTTGCGGAGTCGGTC GCGCGGTCTCAGCCCCCGCG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MSRTSPTAIALEPVAAERSGTGNVVRLAVAQALAGANSTVVFATGAVVGNMLAPSKVLATLPISIFVVGMAACALPTGSI ARRYGRRTVFMVGTGCGVLVGLLSAWAIVAADFWLFCAAMFLGGAYAAVVFSFRFAAADCVPAERRPRALSAVMAGGVFG GVIGPQLVTHTMNLSPPHLFAATFLAQAAVAGAAALVLAGVRLPRPAAETVSGGRPLAVILAQPRFVIAVICGAVSYLLM NFVMTAAPLAMRLCGHAQEDANLGLQWHVIAMYGPSFFTGRLITRFGASRVVATGLALTGAAALVGLAGADVGHFWLSLV LLGVGWNFGFVGASAMVLDCHRPEERTRVQSINDFIVFGMVALGSFSSGGLLTSYGWDTVLWVSFAPLALAATALARTTA RGAPRPGGA
Sequences:
>Translated_409_residues MSRTSPTAIALEPVAAERSGTGNVVRLAVAQALAGANSTVVFATGAVVGNMLAPSKVLATLPISIFVVGMAACALPTGSI ARRYGRRTVFMVGTGCGVLVGLLSAWAIVAADFWLFCAAMFLGGAYAAVVFSFRFAAADCVPAERRPRALSAVMAGGVFG GVIGPQLVTHTMNLSPPHLFAATFLAQAAVAGAAALVLAGVRLPRPAAETVSGGRPLAVILAQPRFVIAVICGAVSYLLM NFVMTAAPLAMRLCGHAQEDANLGLQWHVIAMYGPSFFTGRLITRFGASRVVATGLALTGAAALVGLAGADVGHFWLSLV LLGVGWNFGFVGASAMVLDCHRPEERTRVQSINDFIVFGMVALGSFSSGGLLTSYGWDTVLWVSFAPLALAATALARTTA RGAPRPGGA >Mature_408_residues SRTSPTAIALEPVAAERSGTGNVVRLAVAQALAGANSTVVFATGAVVGNMLAPSKVLATLPISIFVVGMAACALPTGSIA RRYGRRTVFMVGTGCGVLVGLLSAWAIVAADFWLFCAAMFLGGAYAAVVFSFRFAAADCVPAERRPRALSAVMAGGVFGG VIGPQLVTHTMNLSPPHLFAATFLAQAAVAGAAALVLAGVRLPRPAAETVSGGRPLAVILAQPRFVIAVICGAVSYLLMN FVMTAAPLAMRLCGHAQEDANLGLQWHVIAMYGPSFFTGRLITRFGASRVVATGLALTGAAALVGLAGADVGHFWLSLVL LGVGWNFGFVGASAMVLDCHRPEERTRVQSINDFIVFGMVALGSFSSGGLLTSYGWDTVLWVSFAPLALAATALARTTAR GAPRPGGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 41923; Mature: 41792
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTSPTAIALEPVAAERSGTGNVVRLAVAQALAGANSTVVFATGAVVGNMLAPSKVLAT CCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHCCHHHHHHH LPISIFVVGMAACALPTGSIARRYGRRTVFMVGTGCGVLVGLLSAWAIVAADFWLFCAAM HHHHHHHHHHHHHHCCCHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH FLGGAYAAVVFSFRFAAADCVPAERRPRALSAVMAGGVFGGVIGPQLVTHTMNLSPPHLF HHCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHH AATFLAQAAVAGAAALVLAGVRLPRPAAETVSGGRPLAVILAQPRFVIAVICGAVSYLLM HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHH NFVMTAAPLAMRLCGHAQEDANLGLQWHVIAMYGPSFFTGRLITRFGASRVVATGLALTG HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHH AAALVGLAGADVGHFWLSLVLLGVGWNFGFVGASAMVLDCHRPEERTRVQSINDFIVFGM HHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHH VALGSFSSGGLLTSYGWDTVLWVSFAPLALAATALARTTARGAPRPGGA HHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SRTSPTAIALEPVAAERSGTGNVVRLAVAQALAGANSTVVFATGAVVGNMLAPSKVLAT CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHCCHHHHHHH LPISIFVVGMAACALPTGSIARRYGRRTVFMVGTGCGVLVGLLSAWAIVAADFWLFCAAM HHHHHHHHHHHHHHCCCHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH FLGGAYAAVVFSFRFAAADCVPAERRPRALSAVMAGGVFGGVIGPQLVTHTMNLSPPHLF HHCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHH AATFLAQAAVAGAAALVLAGVRLPRPAAETVSGGRPLAVILAQPRFVIAVICGAVSYLLM HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHH NFVMTAAPLAMRLCGHAQEDANLGLQWHVIAMYGPSFFTGRLITRFGASRVVATGLALTG HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHH AAALVGLAGADVGHFWLSLVLLGVGWNFGFVGASAMVLDCHRPEERTRVQSINDFIVFGM HHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHH VALGSFSSGGLLTSYGWDTVLWVSFAPLALAATALARTTARGAPRPGGA HHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]