| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is nagZ [H]
Identifier: 170749172
GI number: 170749172
Start: 2901346
End: 2902350
Strand: Reverse
Name: nagZ [H]
Synonym: Mrad2831_2765
Alternate gene names: 170749172
Gene position: 2902350-2901346 (Counterclockwise)
Preceding gene: 170749173
Following gene: 170749171
Centisome position: 47.75
GC content: 74.83
Gene sequence:
>1005_bases ATGACCTCCCGCGCCCTGATCCTCGGCTGCTCCGGTAAGTCGCTCTTGGCGGAGGAGAGGGCCTTCTTCCGGGACGTGAA GCCCTGGGGCTTCATCCTGTTCAAGCGCAACATCGGGACGCCCGACGAGGTCCGCGCCCTCACCGGGGCGCTCCGGGACT GCGTCGGCTCCGAGCAGGCGCCGGTTTTGATCGACCAGGAAGGCGGCCGGGTCCAGCGCATGGGGCCGCCCCACTGGCCG GCCTACCCGGCCGGCGGCCGCTACGGCCGCCTGAACGGCAGCGCCGCCACGGTCGCCCGCCTCGGGGCGCGCCTCATGGC GCACGACCTCGCCGAAGTCGGGATCAACGTCGACTGCGCCCCCGTCCTCGACGTGCCGGCGCCGGGCTCGCACGACATCA TCGGTGACCGCGCCTACGGGACGAGCCCGGAGCGGGTGGCCGAGATCGGGCGCGCCGTGGCCGAGGGCCTGATGGCCGGC GGCGTCCTGCCGGTGATGAAGCACATTCCCGGGCACGGGCGCGCCACCTGCGACAGCCACCACGGCCTCCCGGTGGTCGA CGCGACCCGCGCGGATCTCGCGGGTCAGGATTTCCGGACCTTCCGGGCGCTCGCCGACCTGCCGATGGCGATGAGCGCGC ACGTCGTCTTCACCGCCATCGACCCCGACCGGCCGGCCACCCAGTCGGCGACCGTCGTCCGCGACATCATCCGCGGCGCC ATCGGCTTCGACGGCCTGCTGATGACCGACGACCTGTCCATGCACGCGCTGACCGGCACGTTCCGCGACCGGACGGAGCG CGCCTTCGCGGCGGGGATCGATGTCGGGCTCCACTGCAACGGCGCGATGGACGAGATGCGGGCCGTGGCCGAGGCGGCGC CCGAACTCACCGGCGCGGCCGCCCGCCGCGCCGCCGCCGCGCTGGCGCGGCTCGACCCCGCTGGCGACGGGCTGGACGTC GCGGAGGCCCGGGACCGCTTCGCCGCGGCCCTCGCGGCCGCCTGA
Upstream 100 bases:
>100_bases CCCGCCCGACTCTGTCGCCATCGATACGAACCGCCCGGCGGTCTCCGCCGTCCACGCGCCGTCGTCGCGCCGCCACCGAG CAGTGTCCGAGCCGTTCCTG
Downstream 100 bases:
>100_bases CCTGAGTCACCTTGCGGCCTTCCACCGCGGCCTTCCACCGGCCGTGGCATCGCCTCTGCTTGTGTTCGGGCGGCGCGATC CCTAGGTTCGCCCCGAAATC
Product: beta-N-acetylhexosaminidase
Products: NA
Alternate protein names: Beta-N-acetylhexosaminidase; N-acetyl-beta-glucosaminidase [H]
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MTSRALILGCSGKSLLAEERAFFRDVKPWGFILFKRNIGTPDEVRALTGALRDCVGSEQAPVLIDQEGGRVQRMGPPHWP AYPAGGRYGRLNGSAATVARLGARLMAHDLAEVGINVDCAPVLDVPAPGSHDIIGDRAYGTSPERVAEIGRAVAEGLMAG GVLPVMKHIPGHGRATCDSHHGLPVVDATRADLAGQDFRTFRALADLPMAMSAHVVFTAIDPDRPATQSATVVRDIIRGA IGFDGLLMTDDLSMHALTGTFRDRTERAFAAGIDVGLHCNGAMDEMRAVAEAAPELTGAAARRAAAALARLDPAGDGLDV AEARDRFAAALAAA
Sequences:
>Translated_334_residues MTSRALILGCSGKSLLAEERAFFRDVKPWGFILFKRNIGTPDEVRALTGALRDCVGSEQAPVLIDQEGGRVQRMGPPHWP AYPAGGRYGRLNGSAATVARLGARLMAHDLAEVGINVDCAPVLDVPAPGSHDIIGDRAYGTSPERVAEIGRAVAEGLMAG GVLPVMKHIPGHGRATCDSHHGLPVVDATRADLAGQDFRTFRALADLPMAMSAHVVFTAIDPDRPATQSATVVRDIIRGA IGFDGLLMTDDLSMHALTGTFRDRTERAFAAGIDVGLHCNGAMDEMRAVAEAAPELTGAAARRAAAALARLDPAGDGLDV AEARDRFAAALAAA >Mature_333_residues TSRALILGCSGKSLLAEERAFFRDVKPWGFILFKRNIGTPDEVRALTGALRDCVGSEQAPVLIDQEGGRVQRMGPPHWPA YPAGGRYGRLNGSAATVARLGARLMAHDLAEVGINVDCAPVLDVPAPGSHDIIGDRAYGTSPERVAEIGRAVAEGLMAGG VLPVMKHIPGHGRATCDSHHGLPVVDATRADLAGQDFRTFRALADLPMAMSAHVVFTAIDPDRPATQSATVVRDIIRGAI GFDGLLMTDDLSMHALTGTFRDRTERAFAAGIDVGLHCNGAMDEMRAVAEAAPELTGAAARRAAAALARLDPAGDGLDVA EARDRFAAALAAA
Specific function: Cleaves GlcNAc linked beta-1,4 to MurNAc tripeptides [H]
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family. NagZ subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787350, Length=283, Percent_Identity=33.5689045936396, Blast_Score=144, Evalue=8e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022956 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3 [H]
EC number: =3.2.1.52 [H]
Molecular weight: Translated: 35010; Mature: 34879
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSRALILGCSGKSLLAEERAFFRDVKPWGFILFKRNIGTPDEVRALTGALRDCVGSEQA CCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCC PVLIDQEGGRVQRMGPPHWPAYPAGGRYGRLNGSAATVARLGARLMAHDLAEVGINVDCA CEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC PVLDVPAPGSHDIIGDRAYGTSPERVAEIGRAVAEGLMAGGVLPVMKHIPGHGRATCDSH EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCC HGLPVVDATRADLAGQDFRTFRALADLPMAMSAHVVFTAIDPDRPATQSATVVRDIIRGA CCCCEEECCHHHCCCCHHHHHHHHHHCCHHEECEEEEEEECCCCCCCHHHHHHHHHHHHH IGFDGLLMTDDLSMHALTGTFRDRTERAFAAGIDVGLHCNGAMDEMRAVAEAAPELTGAA CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHH ARRAAAALARLDPAGDGLDVAEARDRFAAALAAA HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TSRALILGCSGKSLLAEERAFFRDVKPWGFILFKRNIGTPDEVRALTGALRDCVGSEQA CCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCC PVLIDQEGGRVQRMGPPHWPAYPAGGRYGRLNGSAATVARLGARLMAHDLAEVGINVDCA CEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC PVLDVPAPGSHDIIGDRAYGTSPERVAEIGRAVAEGLMAGGVLPVMKHIPGHGRATCDSH EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCC HGLPVVDATRADLAGQDFRTFRALADLPMAMSAHVVFTAIDPDRPATQSATVVRDIIRGA CCCCEEECCHHHCCCCHHHHHHHHHHCCHHEECEEEEEEECCCCCCCHHHHHHHHHHHHH IGFDGLLMTDDLSMHALTGTFRDRTERAFAAGIDVGLHCNGAMDEMRAVAEAAPELTGAA CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHH ARRAAAALARLDPAGDGLDVAEARDRFAAALAAA HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA