| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is tatC [H]
Identifier: 170749169
GI number: 170749169
Start: 2899419
End: 2900219
Strand: Reverse
Name: tatC [H]
Synonym: Mrad2831_2762
Alternate gene names: 170749169
Gene position: 2900219-2899419 (Counterclockwise)
Preceding gene: 170749170
Following gene: 170749166
Centisome position: 47.72
GC content: 64.54
Gene sequence:
>801_bases ATGATCAGCGAGGCGGATGAGGCCGAGATCGAGGCGTCGCGGGCGCCCCTGCTCGAGCACCTGATCGAATTGCGCGCGCG GCTGATCAAGTCACTGATCGCGTTCGTGTTGATGTTCTTCGCGTGCTTCTTCTTCTCGCGCGACATCTACAACGTGCTGG TCTATCCCTACGTGTCGATCGTGGGCGCGCAGAACGCCGAGCTGATCGCCACGCACTTCCTCGAGCAGGTGTTCACCAAC ATCAAGCTCAGCGTCTTCGGCGCGGCCTTCCTGGCTTTTCCCGTGATCGCTACGCAGATCTACGCCTTCGTGGCGCCAGG CCTCTACCGCAACGAGCGCAAGGCGTTCCTCCCCTACTTGGTCGCCACGCCGATCTTCTTCGTCCTCGGCGCGCTGGTGG TGTTCTTCCTGGCGATGCCCCTGCTGATCAAGTTCTCGGTGTCGCTCCAGCAGGTTGGCGTGGCCGGCGAGCCGACGATC AAGCTGCTCCCGAAGGTCGACGAGTACCTGTCGCTGATCATGACGCTGATCTTCGCGTTCGGCATCGCGTTCCAGCTGCC GGTCATCCTGACGCTGCTCGGGCAGATCGGGATCATCGACGCTGCCTTCCTGCGCGAGAAGCGCCGCTACGCGATCGTGC TGGTCTTCGTCGCCGCCGCGATCCTGACGCCGCCGGACGTGATCTCGCAGCTCTCCCTCGCGATCCCGATGCTGCTCCTC TACGAGGCCTCGGTGTTCTCGGTGGCGCGGGTCGAGAAGCTGCGGGCGGCGCGGCGCGCGGCGGAAGGCCTCGAGCCGTG A
Upstream 100 bases:
>100_bases TGCCCGTACCCGGATCGGTGGACGATCCGTTCGGGCCTCCGCCCGAACCGCCCGCCGCGCACCCCGCCTCCGAAGAGTCC AAGAACGGCACGACGGCCCG
Downstream 100 bases:
>100_bases GGCGGCCGGCGCGCCGGACTCAGTCCGGCGCGCGCAGGCGGTAGCCCACGCCGGTCTCGGTGAGCAGGTAGCGCGGGCGC TCCGGGTCCGGCTCGAGCTT
Product: Sec-independent protein translocase subunit TatC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MISEADEAEIEASRAPLLEHLIELRARLIKSLIAFVLMFFACFFFSRDIYNVLVYPYVSIVGAQNAELIATHFLEQVFTN IKLSVFGAAFLAFPVIATQIYAFVAPGLYRNERKAFLPYLVATPIFFVLGALVVFFLAMPLLIKFSVSLQQVGVAGEPTI KLLPKVDEYLSLIMTLIFAFGIAFQLPVILTLLGQIGIIDAAFLREKRRYAIVLVFVAAAILTPPDVISQLSLAIPMLLL YEASVFSVARVEKLRAARRAAEGLEP
Sequences:
>Translated_266_residues MISEADEAEIEASRAPLLEHLIELRARLIKSLIAFVLMFFACFFFSRDIYNVLVYPYVSIVGAQNAELIATHFLEQVFTN IKLSVFGAAFLAFPVIATQIYAFVAPGLYRNERKAFLPYLVATPIFFVLGALVVFFLAMPLLIKFSVSLQQVGVAGEPTI KLLPKVDEYLSLIMTLIFAFGIAFQLPVILTLLGQIGIIDAAFLREKRRYAIVLVFVAAAILTPPDVISQLSLAIPMLLL YEASVFSVARVEKLRAARRAAEGLEP >Mature_266_residues MISEADEAEIEASRAPLLEHLIELRARLIKSLIAFVLMFFACFFFSRDIYNVLVYPYVSIVGAQNAELIATHFLEQVFTN IKLSVFGAAFLAFPVIATQIYAFVAPGLYRNERKAFLPYLVATPIFFVLGALVVFFLAMPLLIKFSVSLQQVGVAGEPTI KLLPKVDEYLSLIMTLIFAFGIAFQLPVILTLLGQIGIIDAAFLREKRRYAIVLVFVAAAILTPPDVISQLSLAIPMLLL YEASVFSVARVEKLRAARRAAEGLEP
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG0805
COG function: function code U; Sec-independent protein secretion pathway component TatC
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatC family [H]
Homologues:
Organism=Escherichia coli, GI2367313, Length=231, Percent_Identity=39.3939393939394, Blast_Score=160, Evalue=6e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002033 - InterPro: IPR019820 - InterPro: IPR019822 [H]
Pfam domain/function: PF00902 TatC [H]
EC number: NA
Molecular weight: Translated: 29495; Mature: 29495
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS01218 TATC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISEADEAEIEASRAPLLEHLIELRARLIKSLIAFVLMFFACFFFSRDIYNVLVYPYVSI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGAQNAELIATHFLEQVFTNIKLSVFGAAFLAFPVIATQIYAFVAPGLYRNERKAFLPYL HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHH VATPIFFVLGALVVFFLAMPLLIKFSVSLQQVGVAGEPTIKLLPKVDEYLSLIMTLIFAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHH GIAFQLPVILTLLGQIGIIDAAFLREKRRYAIVLVFVAAAILTPPDVISQLSLAIPMLLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH YEASVFSVARVEKLRAARRAAEGLEP HHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MISEADEAEIEASRAPLLEHLIELRARLIKSLIAFVLMFFACFFFSRDIYNVLVYPYVSI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGAQNAELIATHFLEQVFTNIKLSVFGAAFLAFPVIATQIYAFVAPGLYRNERKAFLPYL HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHH VATPIFFVLGALVVFFLAMPLLIKFSVSLQQVGVAGEPTIKLLPKVDEYLSLIMTLIFAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHH GIAFQLPVILTLLGQIGIIDAAFLREKRRYAIVLVFVAAAILTPPDVISQLSLAIPMLLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH YEASVFSVARVEKLRAARRAAEGLEP HHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]