| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is ysgA [C]
Identifier: 170749140
GI number: 170749140
Start: 2874640
End: 2875512
Strand: Reverse
Name: ysgA [C]
Synonym: Mrad2831_2733
Alternate gene names: 170749140
Gene position: 2875512-2874640 (Counterclockwise)
Preceding gene: 170749141
Following gene: 170749139
Centisome position: 47.31
GC content: 72.05
Gene sequence:
>873_bases ATGGCGGATCACGACCGGGCCGGACTCGACGGGCTGATCACGCCGCCCCTGTCGCGGCGGGGCTTCGTGATGACGAGCCT GATGAGCGGCCTGACGCTCGCGACCACCCGCGTCGAGGCCCAGGTGATCCACACGGACAGTGCGGGCATCGAGGCCGGCG AGGTGAAGATCCCGGCTGCGGACGGCCCGATGCCGGCCTACCGGGCGGTTCCGGAGGGCGCGGGCCCGTTCCCGATCGTC CTGGTAATCGAGGAGATCTTCGGCGTCCACGACTACATCAAGGACATCTGTCGCCGGCTCGCGAAGGCCGGTTACTGCGC CGTGGCCCCCGAGCTCTACGCCCGCCAGGGCGACCTCTCGACCATGTCGGATCCCAAGCAGATCATCCGGGACGTCATCG CTAAGACACCGGACGCGCAGTGGATCGGCGATCTCGACGCGACGGTGGCCTGGGCGGCCTCCGCGGCGAAGGGCGACCCG AACCGTCTGGGCGTCATGGGCTGGTGCCGCGGCGGGCGCGACGCGTGGCTCTACGCGGCCCATCGTCGCGACCTGAAGGC GGCCGTGGCCTGGTACGGACCGATCGGCGGCGAGCGGACCGACATCCAGCCGCGCACCGCCGGAGACGTGGCGGCCGAGA TCCACGCCCCGCTCCTCGCCCTCTACGGCGGGGCCGATGCCGGGATCCCCGTGGCGGCGGTCGAGGAGGCGCGCGACCGC GCCAAGGCGGCGGGCAAGAGTGTCGAGCTCGTGATCTACCCGGAGGCGCCGCACGGCTTCCACGCGGATTACCGTCCGAG CTACCGGCGCGAGGCCGCGGAGGATGGCTGGGCGCGCGCGCTGGCCTTCCTGAAATCGCACGGCGTCGGCTGA
Upstream 100 bases:
>100_bases TGGCGGCTGCCGGGGCCTGACGGCCCGGTAACGGCGGGCGATTTGACCCGGGCCGCCGCGCGCGGGTAGCCCTCATCCTC GAACCGAGGGAGAGAGCACC
Downstream 100 bases:
>100_bases ATAGACGCCTCAGGACGCCCGATCGAGCGCGTTCCGGGACGGCTGTGTTACCCAAGACACGGCCACAACTTCACAATCGT GCAAGGATCCAAGGAGGATC
Product: carboxymethylenebutenolidase
Products: NA
Alternate protein names: Dienelactone hydrolase; DLH [H]
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MADHDRAGLDGLITPPLSRRGFVMTSLMSGLTLATTRVEAQVIHTDSAGIEAGEVKIPAADGPMPAYRAVPEGAGPFPIV LVIEEIFGVHDYIKDICRRLAKAGYCAVAPELYARQGDLSTMSDPKQIIRDVIAKTPDAQWIGDLDATVAWAASAAKGDP NRLGVMGWCRGGRDAWLYAAHRRDLKAAVAWYGPIGGERTDIQPRTAGDVAAEIHAPLLALYGGADAGIPVAAVEEARDR AKAAGKSVELVIYPEAPHGFHADYRPSYRREAAEDGWARALAFLKSHGVG
Sequences:
>Translated_290_residues MADHDRAGLDGLITPPLSRRGFVMTSLMSGLTLATTRVEAQVIHTDSAGIEAGEVKIPAADGPMPAYRAVPEGAGPFPIV LVIEEIFGVHDYIKDICRRLAKAGYCAVAPELYARQGDLSTMSDPKQIIRDVIAKTPDAQWIGDLDATVAWAASAAKGDP NRLGVMGWCRGGRDAWLYAAHRRDLKAAVAWYGPIGGERTDIQPRTAGDVAAEIHAPLLALYGGADAGIPVAAVEEARDR AKAAGKSVELVIYPEAPHGFHADYRPSYRREAAEDGWARALAFLKSHGVG >Mature_289_residues ADHDRAGLDGLITPPLSRRGFVMTSLMSGLTLATTRVEAQVIHTDSAGIEAGEVKIPAADGPMPAYRAVPEGAGPFPIVL VIEEIFGVHDYIKDICRRLAKAGYCAVAPELYARQGDLSTMSDPKQIIRDVIAKTPDAQWIGDLDATVAWAASAAKGDPN RLGVMGWCRGGRDAWLYAAHRRDLKAAVAWYGPIGGERTDIQPRTAGDVAAEIHAPLLALYGGADAGIPVAAVEEARDRA KAAGKSVELVIYPEAPHGFHADYRPSYRREAAEDGWARALAFLKSHGVG
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dienelactone hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI48994982, Length=265, Percent_Identity=46.4150943396226, Blast_Score=251, Evalue=4e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002925 - InterPro: IPR006311 [H]
Pfam domain/function: PF01738 DLH [H]
EC number: =3.1.1.45 [H]
Molecular weight: Translated: 30915; Mature: 30784
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADHDRAGLDGLITPPLSRRGFVMTSLMSGLTLATTRVEAQVIHTDSAGIEAGEVKIPAA CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEEEEEEEECCCCCCCCCCEEECCC DGPMPAYRAVPEGAGPFPIVLVIEEIFGVHDYIKDICRRLAKAGYCAVAPELYARQGDLS CCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHCCCCCC TMSDPKQIIRDVIAKTPDAQWIGDLDATVAWAASAAKGDPNRLGVMGWCRGGRDAWLYAA CCCCHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEHH HRRDLKAAVAWYGPIGGERTDIQPRTAGDVAAEIHAPLLALYGGADAGIPVAAVEEARDR HHHHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHH AKAAGKSVELVIYPEAPHGFHADYRPSYRREAAEDGWARALAFLKSHGVG HHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ADHDRAGLDGLITPPLSRRGFVMTSLMSGLTLATTRVEAQVIHTDSAGIEAGEVKIPAA CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEEEEEEEECCCCCCCCCCEEECCC DGPMPAYRAVPEGAGPFPIVLVIEEIFGVHDYIKDICRRLAKAGYCAVAPELYARQGDLS CCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHCCCCCC TMSDPKQIIRDVIAKTPDAQWIGDLDATVAWAASAAKGDPNRLGVMGWCRGGRDAWLYAA CCCCHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEHH HRRDLKAAVAWYGPIGGERTDIQPRTAGDVAAEIHAPLLALYGGADAGIPVAAVEEARDR HHHHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHH AKAAGKSVELVIYPEAPHGFHADYRPSYRREAAEDGWARALAFLKSHGVG HHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9168622 [H]