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The map label for this gene is yfdZ [C]

Identifier: 170749109

GI number: 170749109

Start: 2846750

End: 2847904

Strand: Reverse

Name: yfdZ [C]

Synonym: Mrad2831_2702

Alternate gene names: 170749109

Gene position: 2847904-2846750 (Counterclockwise)

Preceding gene: 170749114

Following gene: 170749107

Centisome position: 46.86

GC content: 73.59

Gene sequence:

>1155_bases
ATGATCCCGATCTCCCGGCGCGCCGCCGCCGTCCAGCCGTTCCTCGCGATGGATGTCATGGCGGCCGCCGCCGCCAAGGC
GCGGGCGGGCAGCGACGTGGTGCGGATGGAGGTCGGCCAGCCGTCGGCGCCGGCGCCCCGAGCCGTGATCGCGGCCGCAC
AGGCTGCGCTCGCCAGCGGCCGCGTCCCCTACACCGAGGCCCTGGGCCTGCCGTCCCTGCGGGCCCGCATCGCCCGGGAC
TACGCGGAGCGGCACGGCGTCGCGGTGAGCCCGGAGCGGGTGGTGATCACCACCGGATCCTCGGCGGGCTTCGTGCTCGC
CTTCATGAGCCTGTTCGATTCCGGCGCCCGGGTCGCCGTCCCTCAGCCGGGCTATCCGGCCTATCGCAGCATCCTGGCCG
CCCTCGACCTCGTGCCGGCGCCGATGGTGCTGCGCGCCGAGGACCGCTTCGCGCCGACCGCGGCTTTGCTGCGCGAGACC
CACGCCCGCGCGCCGGTCGCCGGGGCGCTGGTGATGAGCCCGGCCAACCCGTCCGGCACGGTGATCACGGAGGGCGCCCT
GCAGGATCTCTGCGCGGCGGCGCGCGGCCTCGGCCTGCCGCTGATCTCCGACGAGATCTATCACGGCCTCAGCTACGGCG
AGCCCACCGTCACGGCGCTGCGCTTCGACCCCGACGCCGTCGTGATCAACTCGTTCTCGAAGTACCACTGCATGACCGGC
TGGCGCGTCGGCTGGATGGTCGTGCCGGAGGCGCTGGTCCGCCCGATCGAGCGGCTGGCGCAGAACCTCTACATCTCGGC
GCCCTACCTGTCGCAGGTCGGCGCGCTGGCGGCCTTCGACGCGACGGACGAGCTGGACGCCGTTCGCGACGGCTACGCGC
GCAACCGCACGATCCTGCTGGACGCCCTGCCGGGCCTCGGCCTCGGCCGCGTGCACCCGGCAGACGGCGCCTTCTACCTC
TACGCAGACGTCTCGAACCTCACCAACGACGCCGCGGATTTCTGCCGGCGCATGCTCGACGAGGCGCACGTCGCGTCGAC
GCCCGGCCTCGACTTCGACCCGGACGTGGGCAACCACCACGTCCGCTTCTCCTTCGCGGGCTCGGAGGCCGAGTGCCGCG
AGGCGGTGGCGCGGCTGAAGGCGTGGCTGCGCTGA

Upstream 100 bases:

>100_bases
GTCGCGGGGACGCGCGGCCGAACCCGGCTCCGGCTTGAGGCAGGGGCCGCGAGCGTCTAACCCCCGCGGCGCCAGCTTCG
TCCGGCGCAGAGCAGACCCC

Downstream 100 bases:

>100_bases
CCGGTCAGGCCGCCGGCACGAGCGCGCCGACCGCCTCGACCAGCTCCGAGAAGTGCTCGATCACCCGGTCGGGGCCGAGT
TCGGCGACCGGCCGGTCGGT

Product: class I and II aminotransferase

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MIPISRRAAAVQPFLAMDVMAAAAAKARAGSDVVRMEVGQPSAPAPRAVIAAAQAALASGRVPYTEALGLPSLRARIARD
YAERHGVAVSPERVVITTGSSAGFVLAFMSLFDSGARVAVPQPGYPAYRSILAALDLVPAPMVLRAEDRFAPTAALLRET
HARAPVAGALVMSPANPSGTVITEGALQDLCAAARGLGLPLISDEIYHGLSYGEPTVTALRFDPDAVVINSFSKYHCMTG
WRVGWMVVPEALVRPIERLAQNLYISAPYLSQVGALAAFDATDELDAVRDGYARNRTILLDALPGLGLGRVHPADGAFYL
YADVSNLTNDAADFCRRMLDEAHVASTPGLDFDPDVGNHHVRFSFAGSEAECREAVARLKAWLR

Sequences:

>Translated_384_residues
MIPISRRAAAVQPFLAMDVMAAAAAKARAGSDVVRMEVGQPSAPAPRAVIAAAQAALASGRVPYTEALGLPSLRARIARD
YAERHGVAVSPERVVITTGSSAGFVLAFMSLFDSGARVAVPQPGYPAYRSILAALDLVPAPMVLRAEDRFAPTAALLRET
HARAPVAGALVMSPANPSGTVITEGALQDLCAAARGLGLPLISDEIYHGLSYGEPTVTALRFDPDAVVINSFSKYHCMTG
WRVGWMVVPEALVRPIERLAQNLYISAPYLSQVGALAAFDATDELDAVRDGYARNRTILLDALPGLGLGRVHPADGAFYL
YADVSNLTNDAADFCRRMLDEAHVASTPGLDFDPDVGNHHVRFSFAGSEAECREAVARLKAWLR
>Mature_384_residues
MIPISRRAAAVQPFLAMDVMAAAAAKARAGSDVVRMEVGQPSAPAPRAVIAAAQAALASGRVPYTEALGLPSLRARIARD
YAERHGVAVSPERVVITTGSSAGFVLAFMSLFDSGARVAVPQPGYPAYRSILAALDLVPAPMVLRAEDRFAPTAALLRET
HARAPVAGALVMSPANPSGTVITEGALQDLCAAARGLGLPLISDEIYHGLSYGEPTVTALRFDPDAVVINSFSKYHCMTG
WRVGWMVVPEALVRPIERLAQNLYISAPYLSQVGALAAFDATDELDAVRDGYARNRTILLDALPGLGLGRVHPADGAFYL
YADVSNLTNDAADFCRRMLDEAHVASTPGLDFDPDVGNHHVRFSFAGSEAECREAVARLKAWLR

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI56713256, Length=399, Percent_Identity=24.5614035087719, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI56713254, Length=399, Percent_Identity=24.5614035087719, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI4507369, Length=390, Percent_Identity=23.5897435897436, Blast_Score=77, Evalue=3e-14,
Organism=Escherichia coli, GI1788722, Length=373, Percent_Identity=27.0777479892761, Blast_Score=124, Evalue=7e-30,
Organism=Escherichia coli, GI1786816, Length=372, Percent_Identity=27.1505376344086, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1788627, Length=342, Percent_Identity=26.3157894736842, Blast_Score=82, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI71994472, Length=266, Percent_Identity=24.4360902255639, Blast_Score=88, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI71994476, Length=266, Percent_Identity=24.4360902255639, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17567663, Length=355, Percent_Identity=24.7887323943662, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17567369, Length=318, Percent_Identity=23.5849056603774, Blast_Score=86, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6320317, Length=352, Percent_Identity=22.1590909090909, Blast_Score=64, Evalue=4e-11,
Organism=Drosophila melanogaster, GI18859735, Length=359, Percent_Identity=23.9554317548747, Blast_Score=79, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 40759; Mature: 40759

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPISRRAAAVQPFLAMDVMAAAAAKARAGSDVVRMEVGQPSAPAPRAVIAAAQAALASG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCC
RVPYTEALGLPSLRARIARDYAERHGVAVSPERVVITTGSSAGFVLAFMSLFDSGARVAV
CCCHHHHCCCHHHHHHHHHHHHHHCCCEECCCEEEEEECCCCHHHHHHHHHHCCCCEEEC
PQPGYPAYRSILAALDLVPAPMVLRAEDRFAPTAALLRETHARAPVAGALVMSPANPSGT
CCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCC
VITEGALQDLCAAARGLGLPLISDEIYHGLSYGEPTVTALRFDPDAVVINSFSKYHCMTG
EEECHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCEEEEEECCCEEEECCCCHHEECCC
WRVGWMVVPEALVRPIERLAQNLYISAPYLSQVGALAAFDATDELDAVRDGYARNRTILL
CEEHHEECCHHHHHHHHHHHHHEEECCHHHHHHHHHEECCCCHHHHHHHCCCCCCCEEEE
DALPGLGLGRVHPADGAFYLYADVSNLTNDAADFCRRMLDEAHVASTPGLDFDPDVGNHH
ECCCCCCCCCCCCCCCCEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE
VRFSFAGSEAECREAVARLKAWLR
EEEEECCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIPISRRAAAVQPFLAMDVMAAAAAKARAGSDVVRMEVGQPSAPAPRAVIAAAQAALASG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCC
RVPYTEALGLPSLRARIARDYAERHGVAVSPERVVITTGSSAGFVLAFMSLFDSGARVAV
CCCHHHHCCCHHHHHHHHHHHHHHCCCEECCCEEEEEECCCCHHHHHHHHHHCCCCEEEC
PQPGYPAYRSILAALDLVPAPMVLRAEDRFAPTAALLRETHARAPVAGALVMSPANPSGT
CCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCC
VITEGALQDLCAAARGLGLPLISDEIYHGLSYGEPTVTALRFDPDAVVINSFSKYHCMTG
EEECHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCEEEEEECCCEEEECCCCHHEECCC
WRVGWMVVPEALVRPIERLAQNLYISAPYLSQVGALAAFDATDELDAVRDGYARNRTILL
CEEHHEECCHHHHHHHHHHHHHEEECCHHHHHHHHHEECCCCHHHHHHHCCCCCCCEEEE
DALPGLGLGRVHPADGAFYLYADVSNLTNDAADFCRRMLDEAHVASTPGLDFDPDVGNHH
ECCCCCCCCCCCCCCCCEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE
VRFSFAGSEAECREAVARLKAWLR
EEEEECCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]