| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is fabI2 [H]
Identifier: 170749089
GI number: 170749089
Start: 2826005
End: 2826835
Strand: Reverse
Name: fabI2 [H]
Synonym: Mrad2831_2682
Alternate gene names: 170749089
Gene position: 2826835-2826005 (Counterclockwise)
Preceding gene: 170749090
Following gene: 170749087
Centisome position: 46.51
GC content: 70.04
Gene sequence:
>831_bases ATGACGGGTTTGATGGCAGGCAAGCGCGGCCTGATCATGGGCGTCGCGAACGATCACTCGATCGCCTGGGGGATCGCCAA GGCGCTGCACGCCCAGGGCGCGCGACTGGCTTTCACCTATCAGGGCGAGGCGCTGGGCCGACGGGTGACGCCGCTCGCCG CCAAGCTCGATTCGGACATCGTGGTGCCCTGCGACGTCGAGGATCTCGCCTCCGTCGACGCGACCTTCGAGGCCCTCGAC GCGCGGTTCGACGGCGGTCTCGACTTCGTGGTCCACGCCATCGGTTTCTCCGACAAGGCGCAGCTCAAGGGGCGCTACGT CGACGTGACGACGCGCGAGAACTTCGTGCGCACGATGACGATCTCGTGCTTCTCGTTCACCGAGATCGCGCAGCGCGCGG CCAAGCGGATGAACCAGGGCGGGTCGCTGCTGACCCTGACCTACGGCGGCGCCACCCGGGTCATGCCGAACTACAACGTC ATGGGCGTCGCCAAGGCGGCGCTCGAGGCCTCGGTGCGCTACCTGGCGAGCGACCTGGGCCCGGACGGGATCCGGGTCAA CGCGCTTTCCGCCGGCCCGATGCGGACCCTGGCGGGCGCCGGGATCGCCGACGCGCGGCTGATGTTCAATCACCAGCGGG CGCACGCGCCGCTGCGGCGCACGGTGAGCCTGGAGGATGTCGGCGGGTCGGCCCTCTACCTGCTGTCGCCGCTCTCGGGC GGCGTCACCGGCGAGGTCCACTTCGTGGATGCCGGCTACAACATCATCTCGATGCCGCGCCCGGACGTGCTGCAGGCGCA GGACGCGGCCGGCGTCGTCGGCGACGCCTGA
Upstream 100 bases:
>100_bases CGCGAGCCGCGTTAAGGCAGCCTGCCGCGGTTCGCTCGTCGCGACCGCGGTCCGGGCCCGCTCCGCGGGTCCGGCGTGCT CGGTCAGGATGTGAGTCGGC
Downstream 100 bases:
>100_bases GGCGCCTCACTCCTCCGGAATGCGCGCCGGGGGCAGGGGACCGGCCGGGACGCCGCGCTCGCCGCGGACTGCCCGCCGCT CCCGCGCGGCGCGCGCCTCC
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: NADH-dependent enoyl-ACP reductase 2 [H]
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MTGLMAGKRGLIMGVANDHSIAWGIAKALHAQGARLAFTYQGEALGRRVTPLAAKLDSDIVVPCDVEDLASVDATFEALD ARFDGGLDFVVHAIGFSDKAQLKGRYVDVTTRENFVRTMTISCFSFTEIAQRAAKRMNQGGSLLTLTYGGATRVMPNYNV MGVAKAALEASVRYLASDLGPDGIRVNALSAGPMRTLAGAGIADARLMFNHQRAHAPLRRTVSLEDVGGSALYLLSPLSG GVTGEVHFVDAGYNIISMPRPDVLQAQDAAGVVGDA
Sequences:
>Translated_276_residues MTGLMAGKRGLIMGVANDHSIAWGIAKALHAQGARLAFTYQGEALGRRVTPLAAKLDSDIVVPCDVEDLASVDATFEALD ARFDGGLDFVVHAIGFSDKAQLKGRYVDVTTRENFVRTMTISCFSFTEIAQRAAKRMNQGGSLLTLTYGGATRVMPNYNV MGVAKAALEASVRYLASDLGPDGIRVNALSAGPMRTLAGAGIADARLMFNHQRAHAPLRRTVSLEDVGGSALYLLSPLSG GVTGEVHFVDAGYNIISMPRPDVLQAQDAAGVVGDA >Mature_275_residues TGLMAGKRGLIMGVANDHSIAWGIAKALHAQGARLAFTYQGEALGRRVTPLAAKLDSDIVVPCDVEDLASVDATFEALDA RFDGGLDFVVHAIGFSDKAQLKGRYVDVTTRENFVRTMTISCFSFTEIAQRAAKRMNQGGSLLTLTYGGATRVMPNYNVM GVAKAALEASVRYLASDLGPDGIRVNALSAGPMRTLAGAGIADARLMFNHQRAHAPLRRTVSLEDVGGSALYLLSPLSGG VTGEVHFVDAGYNIISMPRPDVLQAQDAAGVVGDA
Specific function: Fatty acid biosynthesis pathway; second reduction step. [C]
COG id: COG0623
COG function: function code I; Enoyl-[acyl-carrier-protein] reductase (NADH)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily [H]
Homologues:
Organism=Homo sapiens, GI7705925, Length=265, Percent_Identity=27.9245283018868, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1787545, Length=259, Percent_Identity=52.8957528957529, Blast_Score=263, Evalue=1e-71, Organism=Escherichia coli, GI2367365, Length=256, Percent_Identity=27.734375, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI1787905, Length=141, Percent_Identity=32.6241134751773, Blast_Score=63, Evalue=2e-11, Organism=Drosophila melanogaster, GI24644337, Length=208, Percent_Identity=28.8461538461538, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR014358 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.9 [H]
Molecular weight: Translated: 29113; Mature: 28981
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGLMAGKRGLIMGVANDHSIAWGIAKALHAQGARLAFTYQGEALGRRVTPLAAKLDSDI CCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCHHHCCCCCHHHHHCCCCE VVPCDVEDLASVDATFEALDARFDGGLDFVVHAIGFSDKAQLKGRYVDVTTRENFVRTMT EEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHCCEEEEEECCCCEEEEEE ISCFSFTEIAQRAAKRMNQGGSLLTLTYGGATRVMPNYNVMGVAKAALEASVRYLASDLG EEHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHCC PDGIRVNALSAGPMRTLAGAGIADARLMFNHQRAHAPLRRTVSLEDVGGSALYLLSPLSG CCCEEEEEECCCCHHHHHCCCCCHHHHEECCHHHCCCHHHEEEEECCCCCEEEEEECCCC GVTGEVHFVDAGYNIISMPRPDVLQAQDAAGVVGDA CCEEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TGLMAGKRGLIMGVANDHSIAWGIAKALHAQGARLAFTYQGEALGRRVTPLAAKLDSDI CCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCHHHCCCCCHHHHHCCCCE VVPCDVEDLASVDATFEALDARFDGGLDFVVHAIGFSDKAQLKGRYVDVTTRENFVRTMT EEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHCCEEEEEECCCCEEEEEE ISCFSFTEIAQRAAKRMNQGGSLLTLTYGGATRVMPNYNVMGVAKAALEASVRYLASDLG EEHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHCC PDGIRVNALSAGPMRTLAGAGIADARLMFNHQRAHAPLRRTVSLEDVGGSALYLLSPLSG CCCEEEEEECCCCHHHHHCCCCCHHHHEECCHHHCCCHHHEEEEECCCCCEEEEEECCCC GVTGEVHFVDAGYNIISMPRPDVLQAQDAAGVVGDA CCEEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]