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The map label for this gene is yhcM [H]

Identifier: 170749080

GI number: 170749080

Start: 2819144

End: 2820376

Strand: Reverse

Name: yhcM [H]

Synonym: Mrad2831_2673

Alternate gene names: 170749080

Gene position: 2820376-2819144 (Counterclockwise)

Preceding gene: 170749082

Following gene: 170749079

Centisome position: 46.4

GC content: 71.61

Gene sequence:

>1233_bases
GTGAACGACAGATCCGGCAAGTCCATCGCACCGTCGCCGGCGGCGCTCGCCGGCGCCGTCTCGCCCGGCCCGGTCCACGA
GCGCTACGAGGCGCTGGTCGGCACCGGCGCCATCGAGCGCGATCCGGCCCAGGCGCACTTGGTGCGCGCCCTCGACCGGC
TGGTCCTCGACCTTCAGCGCCGCAAGCGGGCCAGCAAGACGAGCGCCCTGGGATGGCTGTTCCGGCGCAAGGACGAGGCC
GAGGCGATCAGGGGCCTCTACATCTGGGGCTCGGTCGGGCGCGGGAAGACCATGCTGATGGACCTGTTCCACGAGGCGGC
GCCGGAGCCGAAAAGACGGGTCCATTTCCACGGCTTCCTCGCCGACGCGCACGAGCGCATCCACGCCTACCGGCAGGCGC
TGAAGGCCGGCACCGTCAAGGGCGACGATCCGATCGGCCCGGTGGCCGACCAGCTCGCCGACGAGGCGACCCTGCTGTGC
TTCGACGAGTTCACCGTCACCGACATCGCGGACGCGATGATCCTGGGGCGCCTGTTCAACCACCTGTTCCGGCGCGGCGT
CACCGTCGTCGCGACCTCGAACGTCGAGCCGGACCGGCTCTACGAGGGCGGCCTCAACCGGGCGCTGTTCCTGCCCTTCG
TGGCGACCCTCAAGGAGCGCGTCGACGTCGTCCGGCTCGATTCCCGGACCGATTTTCGGCTCGAGAAGCTCGGCGGCGCG
GCCGTCTACCATGTGCCGGCCGACGCGGTGGCGCGCGCGGCCCTCGATGCCGCCTTCAAGGCCCTGACCGGTAAGGCCCG
CGGCCTCCCGACGACGGTCACGGTCCACGGCCGGGCCGTGGCGGTTCCGGAGCAGGCGACCGGGGTAGCCCGGTTCGGCT
TCGACGATCTGTGCCGCCAGCCCCTCGGCGCCTCCGACTACATGGCGCTCGCCCGCGCCTACCACACGGTGATCCTGGAC
GGGATCCCGGTGATGGGGGAGGCGGAGCGGAACGAGGCCAAGCGCTTCATCACGCTGGTCGACACGCTCTACGACCGGCA
CGTGAAGCTCGTCGCCTCCGCGGCGGCGGAAGCGCAGGACCTCTACACCGCCCAGACCGGCCGCGAGGCCTTCGAGTTCG
ACCGGACCGTCTCGCGCCTGATCGAGATGCGCTCGCGGGAGTATCTCGGCCAGCCGCACGGCCGGCCGGACTCCGAGGCG
TCGGGCGCCAGCACCGGGCTGGTGGAGACGTGA

Upstream 100 bases:

>100_bases
GCTTGCGCGGCACTGGAACGGGCCCCGGGTCGTTGACCGCCGACGCGGGCGCAAGGGGGTGCCGAACCGGTGCCGCGATC
AGCAGCGAGGAACCGGCGGC

Downstream 100 bases:

>100_bases
GCGCCCCGTCGCGTGCCGGATCGATCTTCGGGCTGCGTCGGCGCAACTGGCGCGGCGCCGGCCCGCTGGGCTGGCTCCTG
GGCTCCCCGGCGGCCTTCCT

Product: AFG1 family ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MNDRSGKSIAPSPAALAGAVSPGPVHERYEALVGTGAIERDPAQAHLVRALDRLVLDLQRRKRASKTSALGWLFRRKDEA
EAIRGLYIWGSVGRGKTMLMDLFHEAAPEPKRRVHFHGFLADAHERIHAYRQALKAGTVKGDDPIGPVADQLADEATLLC
FDEFTVTDIADAMILGRLFNHLFRRGVTVVATSNVEPDRLYEGGLNRALFLPFVATLKERVDVVRLDSRTDFRLEKLGGA
AVYHVPADAVARAALDAAFKALTGKARGLPTTVTVHGRAVAVPEQATGVARFGFDDLCRQPLGASDYMALARAYHTVILD
GIPVMGEAERNEAKRFITLVDTLYDRHVKLVASAAAEAQDLYTAQTGREAFEFDRTVSRLIEMRSREYLGQPHGRPDSEA
SGASTGLVET

Sequences:

>Translated_410_residues
MNDRSGKSIAPSPAALAGAVSPGPVHERYEALVGTGAIERDPAQAHLVRALDRLVLDLQRRKRASKTSALGWLFRRKDEA
EAIRGLYIWGSVGRGKTMLMDLFHEAAPEPKRRVHFHGFLADAHERIHAYRQALKAGTVKGDDPIGPVADQLADEATLLC
FDEFTVTDIADAMILGRLFNHLFRRGVTVVATSNVEPDRLYEGGLNRALFLPFVATLKERVDVVRLDSRTDFRLEKLGGA
AVYHVPADAVARAALDAAFKALTGKARGLPTTVTVHGRAVAVPEQATGVARFGFDDLCRQPLGASDYMALARAYHTVILD
GIPVMGEAERNEAKRFITLVDTLYDRHVKLVASAAAEAQDLYTAQTGREAFEFDRTVSRLIEMRSREYLGQPHGRPDSEA
SGASTGLVET
>Mature_410_residues
MNDRSGKSIAPSPAALAGAVSPGPVHERYEALVGTGAIERDPAQAHLVRALDRLVLDLQRRKRASKTSALGWLFRRKDEA
EAIRGLYIWGSVGRGKTMLMDLFHEAAPEPKRRVHFHGFLADAHERIHAYRQALKAGTVKGDDPIGPVADQLADEATLLC
FDEFTVTDIADAMILGRLFNHLFRRGVTVVATSNVEPDRLYEGGLNRALFLPFVATLKERVDVVRLDSRTDFRLEKLGGA
AVYHVPADAVARAALDAAFKALTGKARGLPTTVTVHGRAVAVPEQATGVARFGFDDLCRQPLGASDYMALARAYHTVILD
GIPVMGEAERNEAKRFITLVDTLYDRHVKLVASAAAEAQDLYTAQTGREAFEFDRTVSRLIEMRSREYLGQPHGRPDSEA
SGASTGLVET

Specific function: Unknown

COG id: COG1485

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AFG1 ATPase family [H]

Homologues:

Organism=Homo sapiens, GI21918872, Length=430, Percent_Identity=38.1395348837209, Blast_Score=286, Evalue=2e-77,
Organism=Escherichia coli, GI1789627, Length=374, Percent_Identity=40.9090909090909, Blast_Score=261, Evalue=6e-71,
Organism=Caenorhabditis elegans, GI17505769, Length=414, Percent_Identity=35.7487922705314, Blast_Score=246, Evalue=1e-65,
Organism=Saccharomyces cerevisiae, GI6320783, Length=313, Percent_Identity=37.0607028753994, Blast_Score=190, Evalue=4e-49,
Organism=Drosophila melanogaster, GI20129913, Length=436, Percent_Identity=35.7798165137615, Blast_Score=246, Evalue=2e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005654 [H]

Pfam domain/function: PF03969 AFG1_ATPase [H]

EC number: NA

Molecular weight: Translated: 44789; Mature: 44789

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDRSGKSIAPSPAALAGAVSPGPVHERYEALVGTGAIERDPAQAHLVRALDRLVLDLQR
CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
RKRASKTSALGWLFRRKDEAEAIRGLYIWGSVGRGKTMLMDLFHEAAPEPKRRVHFHGFL
HHHHHHHHHHHHHHHCCCHHHHHCEEEEEECCCCCHHHHHHHHHHHCCCHHHEEEHHHHH
ADAHERIHAYRQALKAGTVKGDDPIGPVADQLADEATLLCFDEFTVTDIADAMILGRLFN
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHH
HLFRRGVTVVATSNVEPDRLYEGGLNRALFLPFVATLKERVDVVRLDSRTDFRLEKLGGA
HHHHCCEEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHCEEEECCCCCHHHHHCCCE
AVYHVPADAVARAALDAAFKALTGKARGLPTTVTVHGRAVAVPEQATGVARFGFDDLCRQ
EEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEECCHHHCCHHHCCHHHHHCC
PLGASDYMALARAYHTVILDGIPVMGEAERNEAKRFITLVDTLYDRHVKLVASAAAEAQD
CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYTAQTGREAFEFDRTVSRLIEMRSREYLGQPHGRPDSEASGASTGLVET
HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNDRSGKSIAPSPAALAGAVSPGPVHERYEALVGTGAIERDPAQAHLVRALDRLVLDLQR
CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
RKRASKTSALGWLFRRKDEAEAIRGLYIWGSVGRGKTMLMDLFHEAAPEPKRRVHFHGFL
HHHHHHHHHHHHHHHCCCHHHHHCEEEEEECCCCCHHHHHHHHHHHCCCHHHEEEHHHHH
ADAHERIHAYRQALKAGTVKGDDPIGPVADQLADEATLLCFDEFTVTDIADAMILGRLFN
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHH
HLFRRGVTVVATSNVEPDRLYEGGLNRALFLPFVATLKERVDVVRLDSRTDFRLEKLGGA
HHHHCCEEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHCEEEECCCCCHHHHHCCCE
AVYHVPADAVARAALDAAFKALTGKARGLPTTVTVHGRAVAVPEQATGVARFGFDDLCRQ
EEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEECCHHHCCHHHCCHHHHHCC
PLGASDYMALARAYHTVILDGIPVMGEAERNEAKRFITLVDTLYDRHVKLVASAAAEAQD
CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYTAQTGREAFEFDRTVSRLIEMRSREYLGQPHGRPDSEASGASTGLVET
HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]