| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is narK [H]
Identifier: 170749003
GI number: 170749003
Start: 2750845
End: 2752212
Strand: Reverse
Name: narK [H]
Synonym: Mrad2831_2593
Alternate gene names: 170749003
Gene position: 2752212-2750845 (Counterclockwise)
Preceding gene: 170749004
Following gene: 170749002
Centisome position: 45.28
GC content: 69.23
Gene sequence:
>1368_bases ATGACCGCCGGCACGCAAACCCTCGCGCCTGGCCGCCCCGCGGGCGGCACCTGGCTCTCGCGCTGGGAACCCGAAAACCC GGCCTTCTGGGCCGAGAGCGGCAGCCGCCTCGCCTGGCGCACCCTCGGCGTCACCACCGCCAACCTGACCATGTCGTTCA TCGTGTGGTTCATGGTCTCCGCCTTGGTCGTCGCGCTCCCGGCGGTCGGGTTCAAGCTCACCACCGGACAGCTCTTCTGG CTCGCCGCCATGCCGGGGCTCGCCGGCGGTACGCTGCGCCTCGTGCACATGTTCCTGACGCCGATGTTCGGCACCCGGCA CGTCGTGACCCTGTCGAGCCTGTTGCTGCTGGTGCCGGCCATCGGCTGGTTCTACGCCGTGCAGGACCCGGCGACGCCCT ACTGGGCGCTCCTCGTCCTGGCGTTCCTGGCCGGCCTCGGCGGTGGCAACTTCTCGTCCTTCATGCCCTCGACCAGCCTG TTCTTTCCCAAGCGGCTGCAGGGCACGGCGCTCGCCGTCCAGGCCGGCGTCGGAAACTTCGGCGTGTCGGTCGTCCAGTT CCTCACGCCCTGGGTCATCGGCTTCGCCCTCGCGGGCGGCACGCTGCTGGGAGAGTCGCAGACCATGACCAAGGGCGCCA TCGAACGGCAGGTCTGGCTGCACAACGCCGCCGCGGTCTACATCCCCTTCATCGTGCTCTTCGCCCTGGCCGCGTGGGTC GCGCTGCGCAGCGTGCCGGTGAAGGCCAACATGCGCGAGCAGATGGACATCTTCCGCTCGCGCCACACCTGGGCGATGAC CTCGCTCTACATCATGACCTTCGGCGCGTTCTCCGGGCTTGCCGGCACGTTCCCGCTGCTGATCAAGCAGTGCTACGGGG CCCTGCCGGGCGCCCCGGAGCCGCTGACCTACGCCTTCCTCGGACCGCTGGTCGGCTCGCTCCTGCGCGTGATGGCGGGG CCGGTCTCGGACCGTCTCGGGGGCGCCAAGGTCACCCTGTTCGCAGGCATCGGCATGGCGGTCTGCGCCGCGCTCGTTCC GCTCTACACCGCTCCGGCCTCGATGGAGAGCTTCCCGTACTTCGTCGGCGCCATGCTCGGCCTCTTTGCCTTCGCGGGCA TCGGCAACGCGTCGACCTTCAAGCAGATGCCGATGATCTTCCCGCCCCGGCAGGCCGGCGGTGTCATCGGGTTCACCGGC GCGGTCGCCGCCTACGGCCCGTTCGCCTTCGGCATGCTGTTCGCCTGGGCCTTCGGGACCTTCGGCGGCCCGAACGTCAT CTTCTACGGTCTCGCACTGTTCTTCGCCCTCAACGTCGTGATGAACTGGTGGATGTACGCGCGCCGTGGGGCAGCGACCC CCTGCTGA
Upstream 100 bases:
>100_bases AACGTCGACGGTCTCCGGAATCCCATCGGCGTCCCGGCCGAGTGAATGCCCCTGCCGGGGCACGGCCCCGGTCCCACTCC CCCACTGAAAGGCAACGTCC
Downstream 100 bases:
>100_bases CAGGAAGGGGGCGGGCGGCACCTGACACACCATCAGAGCATATGCGGCCGGCGGAGGGGGCCCCTCCGCCGGCCGTTCGC GTCAAGCGGGCCGAGCCGAC
Product: major facilitator transporter
Products: NA
Alternate protein names: Nitrite facilitator 1 [H]
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MTAGTQTLAPGRPAGGTWLSRWEPENPAFWAESGSRLAWRTLGVTTANLTMSFIVWFMVSALVVALPAVGFKLTTGQLFW LAAMPGLAGGTLRLVHMFLTPMFGTRHVVTLSSLLLLVPAIGWFYAVQDPATPYWALLVLAFLAGLGGGNFSSFMPSTSL FFPKRLQGTALAVQAGVGNFGVSVVQFLTPWVIGFALAGGTLLGESQTMTKGAIERQVWLHNAAAVYIPFIVLFALAAWV ALRSVPVKANMREQMDIFRSRHTWAMTSLYIMTFGAFSGLAGTFPLLIKQCYGALPGAPEPLTYAFLGPLVGSLLRVMAG PVSDRLGGAKVTLFAGIGMAVCAALVPLYTAPASMESFPYFVGAMLGLFAFAGIGNASTFKQMPMIFPPRQAGGVIGFTG AVAAYGPFAFGMLFAWAFGTFGGPNVIFYGLALFFALNVVMNWWMYARRGAATPC
Sequences:
>Translated_455_residues MTAGTQTLAPGRPAGGTWLSRWEPENPAFWAESGSRLAWRTLGVTTANLTMSFIVWFMVSALVVALPAVGFKLTTGQLFW LAAMPGLAGGTLRLVHMFLTPMFGTRHVVTLSSLLLLVPAIGWFYAVQDPATPYWALLVLAFLAGLGGGNFSSFMPSTSL FFPKRLQGTALAVQAGVGNFGVSVVQFLTPWVIGFALAGGTLLGESQTMTKGAIERQVWLHNAAAVYIPFIVLFALAAWV ALRSVPVKANMREQMDIFRSRHTWAMTSLYIMTFGAFSGLAGTFPLLIKQCYGALPGAPEPLTYAFLGPLVGSLLRVMAG PVSDRLGGAKVTLFAGIGMAVCAALVPLYTAPASMESFPYFVGAMLGLFAFAGIGNASTFKQMPMIFPPRQAGGVIGFTG AVAAYGPFAFGMLFAWAFGTFGGPNVIFYGLALFFALNVVMNWWMYARRGAATPC >Mature_454_residues TAGTQTLAPGRPAGGTWLSRWEPENPAFWAESGSRLAWRTLGVTTANLTMSFIVWFMVSALVVALPAVGFKLTTGQLFWL AAMPGLAGGTLRLVHMFLTPMFGTRHVVTLSSLLLLVPAIGWFYAVQDPATPYWALLVLAFLAGLGGGNFSSFMPSTSLF FPKRLQGTALAVQAGVGNFGVSVVQFLTPWVIGFALAGGTLLGESQTMTKGAIERQVWLHNAAAVYIPFIVLFALAAWVA LRSVPVKANMREQMDIFRSRHTWAMTSLYIMTFGAFSGLAGTFPLLIKQCYGALPGAPEPLTYAFLGPLVGSLLRVMAGP VSDRLGGAKVTLFAGIGMAVCAALVPLYTAPASMESFPYFVGAMLGLFAFAGIGNASTFKQMPMIFPPRQAGGVIGFTGA VAAYGPFAFGMLFAWAFGTFGGPNVIFYGLALFFALNVVMNWWMYARRGAATPC
Specific function: Involved in excretion of nitrite produced by the dissimilatory reduction of nitrate [H]
COG id: COG2223
COG function: function code P; Nitrate/nitrite transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family [H]
Homologues:
Organism=Escherichia coli, GI1787475, Length=469, Percent_Identity=35.181236673774, Blast_Score=248, Evalue=5e-67, Organism=Escherichia coli, GI1787743, Length=458, Percent_Identity=33.4061135371179, Blast_Score=217, Evalue=1e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004737 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 48512; Mature: 48381
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAGTQTLAPGRPAGGTWLSRWEPENPAFWAESGSRLAWRTLGVTTANLTMSFIVWFMVS CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCHHHHHHHHHHHHHHH ALVVALPAVGFKLTTGQLFWLAAMPGLAGGTLRLVHMFLTPMFGTRHVVTLSSLLLLVPA HHHHHHHHCCEEECCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH IGWFYAVQDPATPYWALLVLAFLAGLGGGNFSSFMPSTSLFFPKRLQGTALAVQAGVGNF HHHHEEECCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHCCCCEEEEECCCCHH GVSVVQFLTPWVIGFALAGGTLLGESQTMTKGAIERQVWLHNAAAVYIPFIVLFALAAWV HHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH ALRSVPVKANMREQMDIFRSRHTWAMTSLYIMTFGAFSGLAGTFPLLIKQCYGALPGAPE HHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PLTYAFLGPLVGSLLRVMAGPVSDRLGGAKVTLFAGIGMAVCAALVPLYTAPASMESFPY CHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHH FVGAMLGLFAFAGIGNASTFKQMPMIFPPRQAGGVIGFTGAVAAYGPFAFGMLFAWAFGT HHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHC FGGPNVIFYGLALFFALNVVMNWWMYARRGAATPC CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TAGTQTLAPGRPAGGTWLSRWEPENPAFWAESGSRLAWRTLGVTTANLTMSFIVWFMVS CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCHHHHHHHHHHHHHHH ALVVALPAVGFKLTTGQLFWLAAMPGLAGGTLRLVHMFLTPMFGTRHVVTLSSLLLLVPA HHHHHHHHCCEEECCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH IGWFYAVQDPATPYWALLVLAFLAGLGGGNFSSFMPSTSLFFPKRLQGTALAVQAGVGNF HHHHEEECCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHCCCCEEEEECCCCHH GVSVVQFLTPWVIGFALAGGTLLGESQTMTKGAIERQVWLHNAAAVYIPFIVLFALAAWV HHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH ALRSVPVKANMREQMDIFRSRHTWAMTSLYIMTFGAFSGLAGTFPLLIKQCYGALPGAPE HHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PLTYAFLGPLVGSLLRVMAGPVSDRLGGAKVTLFAGIGMAVCAALVPLYTAPASMESFPY CHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHH FVGAMLGLFAFAGIGNASTFKQMPMIFPPRQAGGVIGFTGAVAAYGPFAFGMLFAWAFGT HHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHC FGGPNVIFYGLALFFALNVVMNWWMYARRGAATPC CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2668029; 8905232; 9278503; 2657652 [H]