| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is dipZ [H]
Identifier: 170748972
GI number: 170748972
Start: 2718714
End: 2719433
Strand: Reverse
Name: dipZ [H]
Synonym: Mrad2831_2559
Alternate gene names: 170748972
Gene position: 2719433-2718714 (Counterclockwise)
Preceding gene: 170748973
Following gene: 170748971
Centisome position: 44.74
GC content: 68.47
Gene sequence:
>720_bases ATGCTCGGCATGATCGGCCTCGCGTTCGTCGCAGGCATCCTCTCGACGCTCTCTCCGTGCGTGGTGCCGCTCCTGCCATT GGTCCTGGGAGCGGCGGTCTCCGAGCATCGGTTCGGCCCGGTCGCCCTGGCCGGCGGGCTCGCCCTGTCCTTCACGGCGG TCGGCCTCTTCGTGGCGACGATCGGGTTCGCCATCGGCCTGGATGCCGGCGTCTTCAGGATGGCCGCCGCGATTGTCTTG GTCGCGGTCGGGTTCGTCCTCGTCATGCCTCGGCTCCAGGTCGGGATCGCGGTCGCGGCGGGGCCGGTGAGCAATTGGGC GGAGGAACGCTTCGGCGGCTTCTCCGCCTCGGGACTGTGGGGCCAGTTCTCGGTCGGCCTGCTCCTCGGCATCGTCTGGG CGCCCTGCGTAGGCCCGACCCTCGGCGCCGCCTCCGTCATGGCCGCTCGCGGGGAAAATCTCGGTCAGGTCGCCCTGACC ATGCTCGCCTTCGGGCTCGGGGCCGGGCTCCCCCTGCTGATCCTCGGAATGGTGTCTCGCGAGACCATGATGCGGCTGAG AGCCCGCCTCATGTCCACCGGGAAGGGTGCCAAGATCGCGCTTGGCCTCATCCTGGTGGCGATGGGTGTGCTGATCCTCT CCGGTCTCGACAAGGCGCTGGAGACCTACCTCGTTCAGGTCTCGCCTGATTGGCTGACCGAATTGACCACGCGCATCTGA
Upstream 100 bases:
>100_bases ATCTCTTACAAGGGTGCCAAGGAAGTAGCGCGTTCGAGCGGCGAGACCAACGCCGATAAGATCGAGGATCAGCTGAACAA GTCGCTCTGAGGCAGCTCCG
Downstream 100 bases:
>100_bases TTACCGGTTGCCGGTCGACGGCAGCCCCCCTTCAACGTCCGGAGCACCCCGCCCATGACGGCACCGCACTCACTGTTTCC GCGTCAGCCGACGCCTGCCC
Product: cytochrome c biogenesis transmembrane protein
Products: DsbDoxidized; DsbGreduced [C]
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MLGMIGLAFVAGILSTLSPCVVPLLPLVLGAAVSEHRFGPVALAGGLALSFTAVGLFVATIGFAIGLDAGVFRMAAAIVL VAVGFVLVMPRLQVGIAVAAGPVSNWAEERFGGFSASGLWGQFSVGLLLGIVWAPCVGPTLGAASVMAARGENLGQVALT MLAFGLGAGLPLLILGMVSRETMMRLRARLMSTGKGAKIALGLILVAMGVLILSGLDKALETYLVQVSPDWLTELTTRI
Sequences:
>Translated_239_residues MLGMIGLAFVAGILSTLSPCVVPLLPLVLGAAVSEHRFGPVALAGGLALSFTAVGLFVATIGFAIGLDAGVFRMAAAIVL VAVGFVLVMPRLQVGIAVAAGPVSNWAEERFGGFSASGLWGQFSVGLLLGIVWAPCVGPTLGAASVMAARGENLGQVALT MLAFGLGAGLPLLILGMVSRETMMRLRARLMSTGKGAKIALGLILVAMGVLILSGLDKALETYLVQVSPDWLTELTTRI >Mature_239_residues MLGMIGLAFVAGILSTLSPCVVPLLPLVLGAAVSEHRFGPVALAGGLALSFTAVGLFVATIGFAIGLDAGVFRMAAAIVL VAVGFVLVMPRLQVGIAVAAGPVSNWAEERFGGFSASGLWGQFSVGLLLGIVWAPCVGPTLGAASVMAARGENLGQVALT MLAFGLGAGLPLLILGMVSRETMMRLRARLMSTGKGAKIALGLILVAMGVLILSGLDKALETYLVQVSPDWLTELTTRI
Specific function: Required To Facilitate The Formation Of Correct Disulfide Bonds In Some Periplasmic Proteins And For The Assembly Of The Periplasmic C-Type Cytochromes. Acts By Transferring Electrons From Cytoplasmic Thioredoxin To The Periplasm, Thereby Maintaining The
COG id: COG0785
COG function: function code O; Cytochrome c biogenesis protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR003834 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA; PF02683 DsbD [H]
EC number: 1.8.1.8 [C]
Molecular weight: Translated: 24386; Mature: 24386
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGMIGLAFVAGILSTLSPCVVPLLPLVLGAAVSEHRFGPVALAGGLALSFTAVGLFVAT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH IGFAIGLDAGVFRMAAAIVLVAVGFVLVMPRLQVGIAVAAGPVSNWAEERFGGFSASGLW HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCH GQFSVGLLLGIVWAPCVGPTLGAASVMAARGENLGQVALTMLAFGLGAGLPLLILGMVSR HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH ETMMRLRARLMSTGKGAKIALGLILVAMGVLILSGLDKALETYLVQVSPDWLTELTTRI HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure MLGMIGLAFVAGILSTLSPCVVPLLPLVLGAAVSEHRFGPVALAGGLALSFTAVGLFVAT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH IGFAIGLDAGVFRMAAAIVLVAVGFVLVMPRLQVGIAVAAGPVSNWAEERFGGFSASGLW HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCH GQFSVGLLLGIVWAPCVGPTLGAASVMAARGENLGQVALTMLAFGLGAGLPLLILGMVSR HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH ETMMRLRARLMSTGKGAKIALGLILVAMGVLILSGLDKALETYLVQVSPDWLTELTTRI HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DsbGoxidized; DsbDreduced/thiol:disulfide reductase [C]
Specific reaction: DsbDreduced/thiol:disulfide reductase + DsbCoxidized = DsbDoxidized + DsbCreduced DsbGoxidized + DsbDreduced/thiol:disulfide reductase = DsbGreduced + DsbDoxidized [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]