Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

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The map label for this gene is dipZ [H]

Identifier: 170748972

GI number: 170748972

Start: 2718714

End: 2719433

Strand: Reverse

Name: dipZ [H]

Synonym: Mrad2831_2559

Alternate gene names: 170748972

Gene position: 2719433-2718714 (Counterclockwise)

Preceding gene: 170748973

Following gene: 170748971

Centisome position: 44.74

GC content: 68.47

Gene sequence:

>720_bases
ATGCTCGGCATGATCGGCCTCGCGTTCGTCGCAGGCATCCTCTCGACGCTCTCTCCGTGCGTGGTGCCGCTCCTGCCATT
GGTCCTGGGAGCGGCGGTCTCCGAGCATCGGTTCGGCCCGGTCGCCCTGGCCGGCGGGCTCGCCCTGTCCTTCACGGCGG
TCGGCCTCTTCGTGGCGACGATCGGGTTCGCCATCGGCCTGGATGCCGGCGTCTTCAGGATGGCCGCCGCGATTGTCTTG
GTCGCGGTCGGGTTCGTCCTCGTCATGCCTCGGCTCCAGGTCGGGATCGCGGTCGCGGCGGGGCCGGTGAGCAATTGGGC
GGAGGAACGCTTCGGCGGCTTCTCCGCCTCGGGACTGTGGGGCCAGTTCTCGGTCGGCCTGCTCCTCGGCATCGTCTGGG
CGCCCTGCGTAGGCCCGACCCTCGGCGCCGCCTCCGTCATGGCCGCTCGCGGGGAAAATCTCGGTCAGGTCGCCCTGACC
ATGCTCGCCTTCGGGCTCGGGGCCGGGCTCCCCCTGCTGATCCTCGGAATGGTGTCTCGCGAGACCATGATGCGGCTGAG
AGCCCGCCTCATGTCCACCGGGAAGGGTGCCAAGATCGCGCTTGGCCTCATCCTGGTGGCGATGGGTGTGCTGATCCTCT
CCGGTCTCGACAAGGCGCTGGAGACCTACCTCGTTCAGGTCTCGCCTGATTGGCTGACCGAATTGACCACGCGCATCTGA

Upstream 100 bases:

>100_bases
ATCTCTTACAAGGGTGCCAAGGAAGTAGCGCGTTCGAGCGGCGAGACCAACGCCGATAAGATCGAGGATCAGCTGAACAA
GTCGCTCTGAGGCAGCTCCG

Downstream 100 bases:

>100_bases
TTACCGGTTGCCGGTCGACGGCAGCCCCCCTTCAACGTCCGGAGCACCCCGCCCATGACGGCACCGCACTCACTGTTTCC
GCGTCAGCCGACGCCTGCCC

Product: cytochrome c biogenesis transmembrane protein

Products: DsbDoxidized; DsbGreduced [C]

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MLGMIGLAFVAGILSTLSPCVVPLLPLVLGAAVSEHRFGPVALAGGLALSFTAVGLFVATIGFAIGLDAGVFRMAAAIVL
VAVGFVLVMPRLQVGIAVAAGPVSNWAEERFGGFSASGLWGQFSVGLLLGIVWAPCVGPTLGAASVMAARGENLGQVALT
MLAFGLGAGLPLLILGMVSRETMMRLRARLMSTGKGAKIALGLILVAMGVLILSGLDKALETYLVQVSPDWLTELTTRI

Sequences:

>Translated_239_residues
MLGMIGLAFVAGILSTLSPCVVPLLPLVLGAAVSEHRFGPVALAGGLALSFTAVGLFVATIGFAIGLDAGVFRMAAAIVL
VAVGFVLVMPRLQVGIAVAAGPVSNWAEERFGGFSASGLWGQFSVGLLLGIVWAPCVGPTLGAASVMAARGENLGQVALT
MLAFGLGAGLPLLILGMVSRETMMRLRARLMSTGKGAKIALGLILVAMGVLILSGLDKALETYLVQVSPDWLTELTTRI
>Mature_239_residues
MLGMIGLAFVAGILSTLSPCVVPLLPLVLGAAVSEHRFGPVALAGGLALSFTAVGLFVATIGFAIGLDAGVFRMAAAIVL
VAVGFVLVMPRLQVGIAVAAGPVSNWAEERFGGFSASGLWGQFSVGLLLGIVWAPCVGPTLGAASVMAARGENLGQVALT
MLAFGLGAGLPLLILGMVSRETMMRLRARLMSTGKGAKIALGLILVAMGVLILSGLDKALETYLVQVSPDWLTELTTRI

Specific function: Required To Facilitate The Formation Of Correct Disulfide Bonds In Some Periplasmic Proteins And For The Assembly Of The Periplasmic C-Type Cytochromes. Acts By Transferring Electrons From Cytoplasmic Thioredoxin To The Periplasm, Thereby Maintaining The

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR003834
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA; PF02683 DsbD [H]

EC number: 1.8.1.8 [C]

Molecular weight: Translated: 24386; Mature: 24386

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGMIGLAFVAGILSTLSPCVVPLLPLVLGAAVSEHRFGPVALAGGLALSFTAVGLFVAT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
IGFAIGLDAGVFRMAAAIVLVAVGFVLVMPRLQVGIAVAAGPVSNWAEERFGGFSASGLW
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCH
GQFSVGLLLGIVWAPCVGPTLGAASVMAARGENLGQVALTMLAFGLGAGLPLLILGMVSR
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
ETMMRLRARLMSTGKGAKIALGLILVAMGVLILSGLDKALETYLVQVSPDWLTELTTRI
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure
MLGMIGLAFVAGILSTLSPCVVPLLPLVLGAAVSEHRFGPVALAGGLALSFTAVGLFVAT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
IGFAIGLDAGVFRMAAAIVLVAVGFVLVMPRLQVGIAVAAGPVSNWAEERFGGFSASGLW
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCH
GQFSVGLLLGIVWAPCVGPTLGAASVMAARGENLGQVALTMLAFGLGAGLPLLILGMVSR
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
ETMMRLRARLMSTGKGAKIALGLILVAMGVLILSGLDKALETYLVQVSPDWLTELTTRI
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DsbGoxidized; DsbDreduced/thiol:disulfide reductase [C]

Specific reaction: DsbDreduced/thiol:disulfide reductase + DsbCoxidized = DsbDoxidized + DsbCreduced DsbGoxidized + DsbDreduced/thiol:disulfide reductase = DsbGreduced + DsbDoxidized [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]