| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is merA [H]
Identifier: 170748962
GI number: 170748962
Start: 2710697
End: 2712115
Strand: Reverse
Name: merA [H]
Synonym: Mrad2831_2549
Alternate gene names: 170748962
Gene position: 2712115-2710697 (Counterclockwise)
Preceding gene: 170748965
Following gene: 170748961
Centisome position: 44.62
GC content: 70.33
Gene sequence:
>1419_bases ATGTCTTGGACGCACGACGTGGTGGTTGTCGGTGCGGGGGCGGCCGGGCTCACCGCCGCGGGAGGCTTGGCGCAGCTTGG CCTGCGGGTGGCCTTGATCGAGGCGGGGGCGATGGGGGGCGAATGCCTCAATACGGGCTGCGTTCCGTCCAAGGCCCTTC TCGCAATCGCTGCCCGGGCGCAGGCGGTCCGCGACATGGGACGCTTCGGTATCCGCGCGCAGGAGCCGCAAGTCGATTTT TCGGGCGTGATGGCGCAGGTGCGCGGCGTCATCGCCGAGATCGCCCCGCATGACGCGCAGGAGCGTTTCGAAGCCTGGGG CGCCGAGGTGATCCGGGCACATGCCCGCTTCACGGCCCCCCGGACGCTGCTGGTCGCCGGCCGAACCCTCAGGGCACCGA GAATCGTGCTTGCGGTGGGGTCGCGCCCTGCCGTGCCGTCCATCCCGGGTCTCGATGCCGTCCCCTTTTTGACGAACGAG ACGCTGTTTTCCATCGATGCCTTTCCGGAACGCCTCGTCGTGCTGGGCGCCGGTTCGGTCGGCATGGAGATGGCGCAGGC ATTCCGTCGACTCGGGGCCGAAGTTGCGGTGATCGACCGGGGCCCCCCCCTATCCCGGGACGAGCCTGAAGCCGCGGCGC TGGTGTCGGAGCGACTGGAGGCGGAAGGCATCGCGTTCCACCGGGCCGCCATCCGAGGCGTGTCGTCCGTCGGAGGCGGC GTCGCGGTCGCTTTGGATGACGGCGACACCGTCGGGGGAAGCCATCTCCTGGTGGCGCTGGGGCGATCCGCGAACCTTCA TGGGCTTGGCCTCGAAGAGGCCGGCGTGGGTACGGACGGCGGAGGCATCGTCGTCGACGACCGATTGCGGACCAGCGCAC GCGGCGTCTACGCCATCGGCGATTGCCGCGACGGACCTCGCCTGACCCACGCGGCCGGCTACGAGGGCGCGCGGATCGTC GCCGCCATCGGGTTCGGGCTGCGTGCCCGGGTCGACTACCGCGCCCTGCCGCGGGTCGCCTACACCAGCCCCGAACTCGC GCAGGTCGGGATGACGGAAGCGGAGGCAAGGGAGGGGGGCGGCCGTGTCACGGCGATGCGCGAACCCTTCGCCGACAACG ACCGGGCCGTCGCCGAGGGAGCTTCCGTCGGCTTTCTCAAGGTCGTACGACGGAATGGCCGGATCGTCGGTGCCTGCCTC GTGGGAGAGCGGGTGGGCGACCTGACGATGCCGTGGGTTCTCTCCATCGGCGGTGCCAAACCGACACCCTGGGCGTTGTC GGGCATGATCCTGCCGTATCCGACCCGTTCCGAGATCACGAAGGCAGCCGCGTTCGCCATGTACGCACCGCGCCTGTTCT CGCGACCGGCGCGCATATGGGCCGGGGTCCTCGCAGCGCTTCGGCGCCGGCTGGGCTGA
Upstream 100 bases:
>100_bases GGTGTTTTCGAGGCTCATGCGGATCGCTCCTGTCGGTCGGGGGAGACCACGCCGCGCGGAGCGGGGTCAATCGCGCGGGC TGACGCAAGGAAGGATCGTG
Downstream 100 bases:
>100_bases GGCGGTCCCGATGGCTTCCGCTCCTCCTCCTGCCGGCCCCTCATGCTCGCCGTTCCGTGACAGTCGGGCTCCGAGGCTCG CGCCAGGCAAGTTCCGGGAT
Product: pyridine nucleotide-disulfide oxidoreductase dimerisation region
Products: NA
Alternate protein names: Hg(II) reductase [H]
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MSWTHDVVVVGAGAAGLTAAGGLAQLGLRVALIEAGAMGGECLNTGCVPSKALLAIAARAQAVRDMGRFGIRAQEPQVDF SGVMAQVRGVIAEIAPHDAQERFEAWGAEVIRAHARFTAPRTLLVAGRTLRAPRIVLAVGSRPAVPSIPGLDAVPFLTNE TLFSIDAFPERLVVLGAGSVGMEMAQAFRRLGAEVAVIDRGPPLSRDEPEAAALVSERLEAEGIAFHRAAIRGVSSVGGG VAVALDDGDTVGGSHLLVALGRSANLHGLGLEEAGVGTDGGGIVVDDRLRTSARGVYAIGDCRDGPRLTHAAGYEGARIV AAIGFGLRARVDYRALPRVAYTSPELAQVGMTEAEAREGGGRVTAMREPFADNDRAVAEGASVGFLKVVRRNGRIVGACL VGERVGDLTMPWVLSIGGAKPTPWALSGMILPYPTRSEITKAAAFAMYAPRLFSRPARIWAGVLAALRRRLG
Sequences:
>Translated_472_residues MSWTHDVVVVGAGAAGLTAAGGLAQLGLRVALIEAGAMGGECLNTGCVPSKALLAIAARAQAVRDMGRFGIRAQEPQVDF SGVMAQVRGVIAEIAPHDAQERFEAWGAEVIRAHARFTAPRTLLVAGRTLRAPRIVLAVGSRPAVPSIPGLDAVPFLTNE TLFSIDAFPERLVVLGAGSVGMEMAQAFRRLGAEVAVIDRGPPLSRDEPEAAALVSERLEAEGIAFHRAAIRGVSSVGGG VAVALDDGDTVGGSHLLVALGRSANLHGLGLEEAGVGTDGGGIVVDDRLRTSARGVYAIGDCRDGPRLTHAAGYEGARIV AAIGFGLRARVDYRALPRVAYTSPELAQVGMTEAEAREGGGRVTAMREPFADNDRAVAEGASVGFLKVVRRNGRIVGACL VGERVGDLTMPWVLSIGGAKPTPWALSGMILPYPTRSEITKAAAFAMYAPRLFSRPARIWAGVLAALRRRLG >Mature_471_residues SWTHDVVVVGAGAAGLTAAGGLAQLGLRVALIEAGAMGGECLNTGCVPSKALLAIAARAQAVRDMGRFGIRAQEPQVDFS GVMAQVRGVIAEIAPHDAQERFEAWGAEVIRAHARFTAPRTLLVAGRTLRAPRIVLAVGSRPAVPSIPGLDAVPFLTNET LFSIDAFPERLVVLGAGSVGMEMAQAFRRLGAEVAVIDRGPPLSRDEPEAAALVSERLEAEGIAFHRAAIRGVSSVGGGV AVALDDGDTVGGSHLLVALGRSANLHGLGLEEAGVGTDGGGIVVDDRLRTSARGVYAIGDCRDGPRLTHAAGYEGARIVA AIGFGLRARVDYRALPRVAYTSPELAQVGMTEAEAREGGGRVTAMREPFADNDRAVAEGASVGFLKVVRRNGRIVGACLV GERVGDLTMPWVLSIGGAKPTPWALSGMILPYPTRSEITKAAAFAMYAPRLFSRPARIWAGVLAALRRRLG
Specific function: Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0) [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 HMA domains [H]
Homologues:
Organism=Homo sapiens, GI91199540, Length=435, Percent_Identity=29.6551724137931, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI50301238, Length=463, Percent_Identity=27.645788336933, Blast_Score=152, Evalue=5e-37, Organism=Homo sapiens, GI33519430, Length=412, Percent_Identity=25.7281553398058, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI33519428, Length=412, Percent_Identity=25.7281553398058, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI33519426, Length=412, Percent_Identity=25.7281553398058, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI148277065, Length=412, Percent_Identity=25.7281553398058, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI148277071, Length=412, Percent_Identity=25.7281553398058, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI22035672, Length=443, Percent_Identity=27.765237020316, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI291045266, Length=350, Percent_Identity=26.2857142857143, Blast_Score=100, Evalue=5e-21, Organism=Homo sapiens, GI291045268, Length=327, Percent_Identity=25.9938837920489, Blast_Score=89, Evalue=8e-18, Organism=Escherichia coli, GI1786307, Length=418, Percent_Identity=31.1004784688995, Blast_Score=174, Evalue=1e-44, Organism=Escherichia coli, GI1789915, Length=358, Percent_Identity=32.4022346368715, Blast_Score=162, Evalue=3e-41, Organism=Escherichia coli, GI87082354, Length=465, Percent_Identity=28.6021505376344, Blast_Score=148, Evalue=7e-37, Organism=Escherichia coli, GI87081717, Length=446, Percent_Identity=28.9237668161435, Blast_Score=134, Evalue=2e-32, Organism=Caenorhabditis elegans, GI32565766, Length=471, Percent_Identity=29.723991507431, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI17557007, Length=415, Percent_Identity=27.9518072289157, Blast_Score=135, Evalue=4e-32, Organism=Caenorhabditis elegans, GI71983429, Length=361, Percent_Identity=29.6398891966759, Blast_Score=129, Evalue=2e-30, Organism=Caenorhabditis elegans, GI71983419, Length=361, Percent_Identity=29.6398891966759, Blast_Score=129, Evalue=3e-30, Organism=Caenorhabditis elegans, GI71982272, Length=456, Percent_Identity=23.6842105263158, Blast_Score=97, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6321091, Length=477, Percent_Identity=29.559748427673, Blast_Score=163, Evalue=6e-41, Organism=Saccharomyces cerevisiae, GI6325166, Length=429, Percent_Identity=25.6410256410256, Blast_Score=121, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6325240, Length=476, Percent_Identity=26.4705882352941, Blast_Score=110, Evalue=5e-25, Organism=Drosophila melanogaster, GI21358499, Length=438, Percent_Identity=30.365296803653, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI24640553, Length=387, Percent_Identity=30.4909560723514, Blast_Score=131, Evalue=9e-31, Organism=Drosophila melanogaster, GI24640549, Length=387, Percent_Identity=30.4909560723514, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI24640551, Length=387, Percent_Identity=30.4909560723514, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI17737741, Length=387, Percent_Identity=28.1653746770026, Blast_Score=113, Evalue=3e-25,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR017969 - InterPro: IPR006121 - InterPro: IPR000815 - InterPro: IPR021179 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00403 HMA; PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.16.1.1 [H]
Molecular weight: Translated: 49117; Mature: 48986
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: PS00076 PYRIDINE_REDOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWTHDVVVVGAGAAGLTAAGGLAQLGLRVALIEAGAMGGECLNTGCVPSKALLAIAARA CCCCCCEEEEECCCCCHHHCCCHHHHCEEEEEEECCCCCCHHHCCCCCCHHHHHHHHHHH QAVRDMGRFGIRAQEPQVDFSGVMAQVRGVIAEIAPHDAQERFEAWGAEVIRAHARFTAP HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC RTLLVAGRTLRAPRIVLAVGSRPAVPSIPGLDAVPFLTNETLFSIDAFPERLVVLGAGSV CEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCCEEEECCCCCEEEEEECCHH GMEMAQAFRRLGAEVAVIDRGPPLSRDEPEAAALVSERLEAEGIAFHRAAIRGVSSVGGG HHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC VAVALDDGDTVGGSHLLVALGRSANLHGLGLEEAGVGTDGGGIVVDDRLRTSARGVYAIG EEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHCCCCCCCCCEEECCCCCCCCCCEEEEE DCRDGPRLTHAAGYEGARIVAAIGFGLRARVDYRALPRVAYTSPELAQVGMTEAEAREGG CCCCCCCCEECCCCCCCEEEEEECCCCEEEECHHHCCCEECCCCHHHHCCCCHHHHHCCC GRVTAMREPFADNDRAVAEGASVGFLKVVRRNGRIVGACLVGERVGDLTMPWVLSIGGAK CEEEEECCCCCCCCCHHHCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHEEECCCC PTPWALSGMILPYPTRSEITKAAAFAMYAPRLFSRPARIWAGVLAALRRRLG CCCHHHCCEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SWTHDVVVVGAGAAGLTAAGGLAQLGLRVALIEAGAMGGECLNTGCVPSKALLAIAARA CCCCCEEEEECCCCCHHHCCCHHHHCEEEEEEECCCCCCHHHCCCCCCHHHHHHHHHHH QAVRDMGRFGIRAQEPQVDFSGVMAQVRGVIAEIAPHDAQERFEAWGAEVIRAHARFTAP HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC RTLLVAGRTLRAPRIVLAVGSRPAVPSIPGLDAVPFLTNETLFSIDAFPERLVVLGAGSV CEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCCEEEECCCCCEEEEEECCHH GMEMAQAFRRLGAEVAVIDRGPPLSRDEPEAAALVSERLEAEGIAFHRAAIRGVSSVGGG HHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC VAVALDDGDTVGGSHLLVALGRSANLHGLGLEEAGVGTDGGGIVVDDRLRTSARGVYAIG EEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHCCCCCCCCCEEECCCCCCCCCCEEEEE DCRDGPRLTHAAGYEGARIVAAIGFGLRARVDYRALPRVAYTSPELAQVGMTEAEAREGG CCCCCCCCEECCCCCCCEEEEEECCCCEEEECHHHCCCEECCCCHHHHCCCCHHHHHCCC GRVTAMREPFADNDRAVAEGASVGFLKVVRRNGRIVGACLVGERVGDLTMPWVLSIGGAK CEEEEECCCCCCCCCHHHCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHEEECCCC PTPWALSGMILPYPTRSEITKAAAFAMYAPRLFSRPARIWAGVLAALRRRLG CCCHHHCCEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2536669; 10559175; 2067577 [H]