| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is ydhK [H]
Identifier: 170748824
GI number: 170748824
Start: 2564242
End: 2566314
Strand: Reverse
Name: ydhK [H]
Synonym: Mrad2831_2406
Alternate gene names: 170748824
Gene position: 2566314-2564242 (Counterclockwise)
Preceding gene: 170748825
Following gene: 170748823
Centisome position: 42.22
GC content: 76.31
Gene sequence:
>2073_bases GTGATCCTCCCCGGATGGCGCGACTGGGCCTTCGCGCTGAAGACCTACGCGGCGGCGATGCTCGCCCTGTTCCTCGCGCT CTGGATCGACCTGCCGCGGCCCTACTGGGCCCTCGGCACCGTCTACATCACCAGCCAGGTTCTCTCCGGCGCGACGCGCG CGAAGGCGGTCTACCGGGTCTGCGGCACCGCGCTCGGTGCGGCGGTGAGCGTCGTGCTGGTGCCGAACCTCGTGAACGAG CCGATCCTGCTGAGCCTCGCGGTGGCGCTCTGGGTCGCGCTCTGCCTCTACGTCTCGCTCCTCGACCGCACGCCCGCGAG CTACCTGCCGATGCTCGCCGGCTACACGGCGGCGCTGATCGGCTTCCCCGCCGTCGACGATCCCGGGGCGATCTTCGACA CGGCGGTGGCGCGGGCCGAGGAGATCTCCCTGGGGATCGTCTGCGCCAGCCTCGCCGCCACGCTGATCCTGCCGCAATCG GCGGCCCCGCTGATCGTCGCGCGGCTGGACCACTGGTCGGCGGAGGCCCGGGCCTGGATCCGGAGCGCCCTCGCGGCCGC CCGCGCCCCGGAGGTCGCCGGGCCGAGCCAGGGCCGGCGCCTGCGCCTCGCCTCGGACGCGCTCGGCCTCGACGCCCTCG GCCTCGCCCTGCGCAACGAGGCGTCGGGCGCGGAACGCGCCGCGGAGGCCTTCGCGCCGCTCCGGCAGCACATGCTGATG GTCCTGCCGATCGTGGCGGCCGTCGCGGACCGCGTCGCCGCCCTCGAGCAGGCGGGCGCGCTGCCAGCGCGGGTCCGGGC CTTCCTGTCGGACCTCGCCGTCTGGCTCAACGACGAGACCGGGGATGGGGCCGGCGATGGGGCCGGGGATCCGGACCGCG CCGCGCGGCTGCGCGGCCGGATCGACGGGTTCGAGCCGGCCCTCGGCCGGACTCCGGACTGGAACACGCTCCTGCTCGCG AGCCTCGCGGTGCGCCTGCGCGACGTCGTCGACCTGCGCCAGGACCTGCGGGCGCTCCGCGGCCACCTCGCCGCCGGCAC CGCCCCCCGGGCGCCGCTCGCCTTCGCCTACACGGCCCGGGTCCGCTCCATCCGCCACCGGGACCACGGGCTGGCGGCGT TCTCGGCCTTCGGGGTGTTCGTGGGCCTGCTGGTCTGCTGCGCGATCTGGATCACCACCGGCTGGCCGGACGGCTCCGCG GCACCGATGATGGGCGCGGTCGCCTGCTGCCTGTTCGCCGCGCAGGACGATCCCGCGCCGCAGATCCTGAGCTTCACCAA CTCGGCGATCGTCGGCGCCCTCGGCGCGGCCCTCTACCTGTTCGCCGTGCTGCCGCTCGCCACCTCCTTCGAGATGCTGG CCCTGGCGCTGGCGCCCGCCCTGATCCTGTGCGGCCTGATGATGACGCAGCCGCGCACCACCCCGATGGGCATGGGCGCG GCGCTGAACGGCGCGACGCTGCTGGCGCTCCAGAACGGCTACAGCGGCGACTTCGCGCCCTTCGCCAACGGGGTGATCGC CTCGGTGGTCGGCATGTGGGTCGGCGCGGTGGTCACCCGGCTGATCCGCTCGGTCGGCGCCGGCCGGAGCGCCCGGCGGC TGGTGCGGATCAACCGGCAGAGCCTCGCGGCCGCCGCGGCCGGGCGCGGCGCCGGCCACGGGCTCGAGCTCGCGGCCCTG ATGCTCGACCGCGTCGGGCTGATCGCGCCGCGGCTGGCGAGCCTGCCCGCCGACATGTCGGCCTCCGTGGGCGACCTGCT GGCCGATGTCCGGGTCGGCATCAACCTCGTGGAGGTCCGCCGGGTGCGCCGGCGGCTGACGGGACCGGCCCGGAGCGCCG TCGACCGGGTGCTGGCGCTGGCGGCGCGCCAGCTGCGCGGCCGGATTGGCCGGCCGGATTCGGCGCTCCTGGCGGCCCTG GACGACGGACTGGACGCCGTCGCGGGCGCGGCCCCGTCGCCGGAGCGGCGCGCCGCCCTGATCGGCCTCACCGGCCTGCG CCGCGGGCTCTTCCCCGACGCGCCGGCCTACCGGGCGGCGCCCGCGCTGCCCGACCGGGAGATGGCGGCATGA
Upstream 100 bases:
>100_bases TCGACGGCGCGGATCTCGAGGCGAGCCTCCGGGTCTTCGCGGCGCTCCAGCGCCACGGGCGGGAGGCCGCCGCGGCCGCG CGCGAACCGGAGGCGGTGCC
Downstream 100 bases:
>100_bases TGGGCGAGATCGACCTCTACGGCGTGTTCGTGCCGGGCCTCGCGCTCTGGATGGCCGTCGCCTTCGCGCTCAGCCTGCCG CTGCGCCGCCTGCTGGCGGC
Product: fusaric acid resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 690; Mature: 690
Protein sequence:
>690_residues MILPGWRDWAFALKTYAAAMLALFLALWIDLPRPYWALGTVYITSQVLSGATRAKAVYRVCGTALGAAVSVVLVPNLVNE PILLSLAVALWVALCLYVSLLDRTPASYLPMLAGYTAALIGFPAVDDPGAIFDTAVARAEEISLGIVCASLAATLILPQS AAPLIVARLDHWSAEARAWIRSALAAARAPEVAGPSQGRRLRLASDALGLDALGLALRNEASGAERAAEAFAPLRQHMLM VLPIVAAVADRVAALEQAGALPARVRAFLSDLAVWLNDETGDGAGDGAGDPDRAARLRGRIDGFEPALGRTPDWNTLLLA SLAVRLRDVVDLRQDLRALRGHLAAGTAPRAPLAFAYTARVRSIRHRDHGLAAFSAFGVFVGLLVCCAIWITTGWPDGSA APMMGAVACCLFAAQDDPAPQILSFTNSAIVGALGAALYLFAVLPLATSFEMLALALAPALILCGLMMTQPRTTPMGMGA ALNGATLLALQNGYSGDFAPFANGVIASVVGMWVGAVVTRLIRSVGAGRSARRLVRINRQSLAAAAAGRGAGHGLELAAL MLDRVGLIAPRLASLPADMSASVGDLLADVRVGINLVEVRRVRRRLTGPARSAVDRVLALAARQLRGRIGRPDSALLAAL DDGLDAVAGAAPSPERRAALIGLTGLRRGLFPDAPAYRAAPALPDREMAA
Sequences:
>Translated_690_residues MILPGWRDWAFALKTYAAAMLALFLALWIDLPRPYWALGTVYITSQVLSGATRAKAVYRVCGTALGAAVSVVLVPNLVNE PILLSLAVALWVALCLYVSLLDRTPASYLPMLAGYTAALIGFPAVDDPGAIFDTAVARAEEISLGIVCASLAATLILPQS AAPLIVARLDHWSAEARAWIRSALAAARAPEVAGPSQGRRLRLASDALGLDALGLALRNEASGAERAAEAFAPLRQHMLM VLPIVAAVADRVAALEQAGALPARVRAFLSDLAVWLNDETGDGAGDGAGDPDRAARLRGRIDGFEPALGRTPDWNTLLLA SLAVRLRDVVDLRQDLRALRGHLAAGTAPRAPLAFAYTARVRSIRHRDHGLAAFSAFGVFVGLLVCCAIWITTGWPDGSA APMMGAVACCLFAAQDDPAPQILSFTNSAIVGALGAALYLFAVLPLATSFEMLALALAPALILCGLMMTQPRTTPMGMGA ALNGATLLALQNGYSGDFAPFANGVIASVVGMWVGAVVTRLIRSVGAGRSARRLVRINRQSLAAAAAGRGAGHGLELAAL MLDRVGLIAPRLASLPADMSASVGDLLADVRVGINLVEVRRVRRRLTGPARSAVDRVLALAARQLRGRIGRPDSALLAAL DDGLDAVAGAAPSPERRAALIGLTGLRRGLFPDAPAYRAAPALPDREMAA >Mature_690_residues MILPGWRDWAFALKTYAAAMLALFLALWIDLPRPYWALGTVYITSQVLSGATRAKAVYRVCGTALGAAVSVVLVPNLVNE PILLSLAVALWVALCLYVSLLDRTPASYLPMLAGYTAALIGFPAVDDPGAIFDTAVARAEEISLGIVCASLAATLILPQS AAPLIVARLDHWSAEARAWIRSALAAARAPEVAGPSQGRRLRLASDALGLDALGLALRNEASGAERAAEAFAPLRQHMLM VLPIVAAVADRVAALEQAGALPARVRAFLSDLAVWLNDETGDGAGDGAGDPDRAARLRGRIDGFEPALGRTPDWNTLLLA SLAVRLRDVVDLRQDLRALRGHLAAGTAPRAPLAFAYTARVRSIRHRDHGLAAFSAFGVFVGLLVCCAIWITTGWPDGSA APMMGAVACCLFAAQDDPAPQILSFTNSAIVGALGAALYLFAVLPLATSFEMLALALAPALILCGLMMTQPRTTPMGMGA ALNGATLLALQNGYSGDFAPFANGVIASVVGMWVGAVVTRLIRSVGAGRSARRLVRINRQSLAAAAAGRGAGHGLELAAL MLDRVGLIAPRLASLPADMSASVGDLLADVRVGINLVEVRRVRRRLTGPARSAVDRVLALAARQLRGRIGRPDSALLAAL DDGLDAVAGAAPSPERRAALIGLTGLRRGLFPDAPAYRAAPALPDREMAA
Specific function: Unknown
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family [H]
Homologues:
Organism=Escherichia coli, GI1789636, Length=159, Percent_Identity=34.5911949685535, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI1787933, Length=156, Percent_Identity=33.3333333333333, Blast_Score=84, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006726 [H]
Pfam domain/function: PF04632 FUSC [H]
EC number: NA
Molecular weight: Translated: 71985; Mature: 71985
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILPGWRDWAFALKTYAAAMLALFLALWIDLPRPYWALGTVYITSQVLSGATRAKAVYRV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH CGTALGAAVSVVLVPNLVNEPILLSLAVALWVALCLYVSLLDRTPASYLPMLAGYTAALI HHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH GFPAVDDPGAIFDTAVARAEEISLGIVCASLAATLILPQSAAPLIVARLDHWSAEARAWI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHCCHHHHHHH RSALAAARAPEVAGPSQGRRLRLASDALGLDALGLALRNEASGAERAAEAFAPLRQHMLM HHHHHHHCCCCCCCCCCCCEEEEHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH VLPIVAAVADRVAALEQAGALPARVRAFLSDLAVWLNDETGDGAGDGAGDPDRAARLRGR HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHC IDGFEPALGRTPDWNTLLLASLAVRLRDVVDLRQDLRALRGHLAAGTAPRAPLAFAYTAR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH VRSIRHRDHGLAAFSAFGVFVGLLVCCAIWITTGWPDGSAAPMMGAVACCLFAAQDDPAP HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCH QILSFTNSAIVGALGAALYLFAVLPLATSFEMLALALAPALILCGLMMTQPRTTPMGMGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC ALNGATLLALQNGYSGDFAPFANGVIASVVGMWVGAVVTRLIRSVGAGRSARRLVRINRQ CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH SLAAAAAGRGAGHGLELAALMLDRVGLIAPRLASLPADMSASVGDLLADVRVGINLVEVR HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHH RVRRRLTGPARSAVDRVLALAARQLRGRIGRPDSALLAALDDGLDAVAGAAPSPERRAAL HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHCCCCCCHHHHHH IGLTGLRRGLFPDAPAYRAAPALPDREMAA HHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MILPGWRDWAFALKTYAAAMLALFLALWIDLPRPYWALGTVYITSQVLSGATRAKAVYRV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH CGTALGAAVSVVLVPNLVNEPILLSLAVALWVALCLYVSLLDRTPASYLPMLAGYTAALI HHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH GFPAVDDPGAIFDTAVARAEEISLGIVCASLAATLILPQSAAPLIVARLDHWSAEARAWI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHCCHHHHHHH RSALAAARAPEVAGPSQGRRLRLASDALGLDALGLALRNEASGAERAAEAFAPLRQHMLM HHHHHHHCCCCCCCCCCCCEEEEHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH VLPIVAAVADRVAALEQAGALPARVRAFLSDLAVWLNDETGDGAGDGAGDPDRAARLRGR HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHC IDGFEPALGRTPDWNTLLLASLAVRLRDVVDLRQDLRALRGHLAAGTAPRAPLAFAYTAR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH VRSIRHRDHGLAAFSAFGVFVGLLVCCAIWITTGWPDGSAAPMMGAVACCLFAAQDDPAP HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCH QILSFTNSAIVGALGAALYLFAVLPLATSFEMLALALAPALILCGLMMTQPRTTPMGMGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC ALNGATLLALQNGYSGDFAPFANGVIASVVGMWVGAVVTRLIRSVGAGRSARRLVRINRQ CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH SLAAAAAGRGAGHGLELAALMLDRVGLIAPRLASLPADMSASVGDLLADVRVGINLVEVR HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHH RVRRRLTGPARSAVDRVLALAARQLRGRIGRPDSALLAALDDGLDAVAGAAPSPERRAAL HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHCCCCCCHHHHHH IGLTGLRRGLFPDAPAYRAAPALPDREMAA HHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]