| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is aaeA [H]
Identifier: 170748822
GI number: 170748822
Start: 2563113
End: 2564039
Strand: Reverse
Name: aaeA [H]
Synonym: Mrad2831_2404
Alternate gene names: 170748822
Gene position: 2564039-2563113 (Counterclockwise)
Preceding gene: 170748823
Following gene: 170748821
Centisome position: 42.19
GC content: 73.25
Gene sequence:
>927_bases ATGACCGCCCTGTTCTCCACCCTCGGCCGCCTCCTGGTCACCCTCGGCATGGTCGCCGCGGCGCTGATCGTCGGCCTCGG CCTGTGGGACTACTACATGGACGCTCCCTGGACCCGGGACGGGCGCGTGCGCGCCGACGTGGTGGCGGTGGCCCCCGACG TCTCCGGCCTCGTCACCGAGGTGCTGGTCGAGGACAATCAGGTCGTCCGGAAGGGCGACGTCCTGTTCCGGATCGATCCG GACCGGTTCCGACTCGGGCTGCGGCAGGCGGAGGCGATGGTGCAGAACCGCAAGGCCACCGCCGAGCAGAACGCGGCCGA CTACGCCCGCTACAGCAGGCTCTCCGACGCGGCGGTGTCGCAGCAGAAGGTCGAGGCCGCCAAGGCCGCCGACCTCTCCG CGGAGGCCGCCTACGAGCAGGCCCTGGCGGATCGCGACCTCGCCAAGCTCAACCTGGAGCGCTCGGCGGTGCGCGCCTCG GTCAACGGCCGGATCACCAACATGGAGCTGCGGCCGGGCGCCTACGTCACCACGGGCCGCGGAGTCATGGCGCTGATCGA CAGCGATACCCTGCGGATCGAGGGCTACTTCGAGGAGACCAAGCTGCCGCGGATCCGCGTCGGCGCGCCGGTGACGGTCC AGCTCATGGGCGAGGACGGGGTGCTCAGCGGCCGAGTCGCCAGCATCGCCGGCGGCATCGGCGAGTCGGGCCGCAGCGAC GCCGCCAACCTGCTCGCGAACGTGAACCCGACCTTCTCGTGGGTGCGCCTCGCCCAGCGCATCCCGGTGCGGATCGCCCT CGACGGCGGCACGGCGGATCCGCGGCTGGTGAGCGGCCGGACCGCGACGGTCTCGATCGCGCCGGCGGCCGGCGGGGCGG CGCTGCGCTGGCCCTGGACGGGGTGGCGCGAGGCGCTCGCCCGCTGA
Upstream 100 bases:
>100_bases CCGGCTTCTACCGCCTCGTCTGGCACAGGCCGCTCTTCGACCTCGCCCTCTACGTCGTCCTGCTCGGCGGCGTCGTGACC CTCGCCCACCGGATCCTGCA
Downstream 100 bases:
>100_bases AGGCGCCCGAACCATCCTGGCGCCCCCGAGTTGGCCTGACACGACAGCGCGACGTCAGCAGCGCACCGTCATGTCAGGAG GTCCCATGTCGAAGACGATC
Product: RND family efflux transporter MFP subunit
Products: NA
Alternate protein names: pHBA efflux pump protein A [H]
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MTALFSTLGRLLVTLGMVAAALIVGLGLWDYYMDAPWTRDGRVRADVVAVAPDVSGLVTEVLVEDNQVVRKGDVLFRIDP DRFRLGLRQAEAMVQNRKATAEQNAADYARYSRLSDAAVSQQKVEAAKAADLSAEAAYEQALADRDLAKLNLERSAVRAS VNGRITNMELRPGAYVTTGRGVMALIDSDTLRIEGYFEETKLPRIRVGAPVTVQLMGEDGVLSGRVASIAGGIGESGRSD AANLLANVNPTFSWVRLAQRIPVRIALDGGTADPRLVSGRTATVSIAPAAGGAALRWPWTGWREALAR
Sequences:
>Translated_308_residues MTALFSTLGRLLVTLGMVAAALIVGLGLWDYYMDAPWTRDGRVRADVVAVAPDVSGLVTEVLVEDNQVVRKGDVLFRIDP DRFRLGLRQAEAMVQNRKATAEQNAADYARYSRLSDAAVSQQKVEAAKAADLSAEAAYEQALADRDLAKLNLERSAVRAS VNGRITNMELRPGAYVTTGRGVMALIDSDTLRIEGYFEETKLPRIRVGAPVTVQLMGEDGVLSGRVASIAGGIGESGRSD AANLLANVNPTFSWVRLAQRIPVRIALDGGTADPRLVSGRTATVSIAPAAGGAALRWPWTGWREALAR >Mature_307_residues TALFSTLGRLLVTLGMVAAALIVGLGLWDYYMDAPWTRDGRVRADVVAVAPDVSGLVTEVLVEDNQVVRKGDVLFRIDPD RFRLGLRQAEAMVQNRKATAEQNAADYARYSRLSDAAVSQQKVEAAKAADLSAEAAYEQALADRDLAKLNLERSAVRASV NGRITNMELRPGAYVTTGRGVMALIDSDTLRIEGYFEETKLPRIRVGAPVTVQLMGEDGVLSGRVASIAGGIGESGRSDA ANLLANVNPTFSWVRLAQRIPVRIALDGGTADPRLVSGRTATVSIAPAAGGAALRWPWTGWREALAR
Specific function: Unknown
COG id: COG1566
COG function: function code V; Multidrug resistance efflux pump
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI1789637, Length=288, Percent_Identity=38.1944444444444, Blast_Score=202, Evalue=3e-53, Organism=Escherichia coli, GI87081951, Length=277, Percent_Identity=36.4620938628159, Blast_Score=198, Evalue=4e-52, Organism=Escherichia coli, GI1790519, Length=309, Percent_Identity=31.0679611650485, Blast_Score=124, Evalue=7e-30, Organism=Escherichia coli, GI1789041, Length=280, Percent_Identity=25.3571428571429, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1788711, Length=308, Percent_Identity=26.6233766233766, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1790012, Length=264, Percent_Identity=28.4090909090909, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1790024, Length=270, Percent_Identity=27.7777777777778, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI87082036, Length=175, Percent_Identity=28.5714285714286, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022871 - InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 33033; Mature: 32902
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALFSTLGRLLVTLGMVAAALIVGLGLWDYYMDAPWTRDGRVRADVVAVAPDVSGLVTE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHH VLVEDNQVVRKGDVLFRIDPDRFRLGLRQAEAMVQNRKATAEQNAADYARYSRLSDAAVS HHHCCCCEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH QQKVEAAKAADLSAEAAYEQALADRDLAKLNLERSAVRASVNGRITNMELRPGAYVTTGR HHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECC GVMALIDSDTLRIEGYFEETKLPRIRVGAPVTVQLMGEDGVLSGRVASIAGGIGESGRSD CEEEEEECCEEEEEEEECCCCCCEEEECCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCH AANLLANVNPTFSWVRLAQRIPVRIALDGGTADPRLVSGRTATVSIAPAAGGAALRWPWT HHHHHHCCCCHHHHHHHHHHCCEEEEECCCCCCCEEECCCEEEEEEECCCCCCEEECCCC GWREALAR HHHHHHCC >Mature Secondary Structure TALFSTLGRLLVTLGMVAAALIVGLGLWDYYMDAPWTRDGRVRADVVAVAPDVSGLVTE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHH VLVEDNQVVRKGDVLFRIDPDRFRLGLRQAEAMVQNRKATAEQNAADYARYSRLSDAAVS HHHCCCCEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH QQKVEAAKAADLSAEAAYEQALADRDLAKLNLERSAVRASVNGRITNMELRPGAYVTTGR HHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECC GVMALIDSDTLRIEGYFEETKLPRIRVGAPVTVQLMGEDGVLSGRVASIAGGIGESGRSD CEEEEEECCEEEEEEEECCCCCCEEEECCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCH AANLLANVNPTFSWVRLAQRIPVRIALDGGTADPRLVSGRTATVSIAPAAGGAALRWPWT HHHHHHCCCCHHHHHHHHHHCCEEEEECCCCCCCEEECCCEEEEEEECCCCCCEEECCCC GWREALAR HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA