| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is thiE [H]
Identifier: 170748377
GI number: 170748377
Start: 2089526
End: 2090272
Strand: Reverse
Name: thiE [H]
Synonym: Mrad2831_1959
Alternate gene names: 170748377
Gene position: 2090272-2089526 (Counterclockwise)
Preceding gene: 170748379
Following gene: 170748376
Centisome position: 34.39
GC content: 76.71
Gene sequence:
>747_bases ATGCCAGCGAGCGCGACTTCCCCCGCGAATTCCCCTGCGAATTCCCCCGCGCCGTCCTCCGCGGCCGGCAGCCGGGCCGT CGACCTGCGCCTCTACGGGCTCCTCGATGTCGGCGTCTGCGGCGCCGACGGGGCGCGGCTGGCGGAACTCGGCGCGGAGG CGGTGGCGGGAGGCTGCACCCTGCTCCAGTACCGCGAGAAGGACATCGCCGATGCCCGCGCCGCCCTGGCGCGGATCCGG GCGATCCTGGCAGCGGTGGGCGGCCGCGTCCCGGTCCTCGTCAACGACCGCGTCGACCTCGCCCTGGCGGCCGGAGCCGA CGGGGTGCATCTCGGCCAGAGCGACCTCCACCCGGCCGACGCGCGCCGGCTCCTGGGGGAGGGCGCGATCATCGGCCTCA CCCTGAAGAAGCCCGCCCAGGCCGACGAGCTGTACCGGCTGCCCGTCGACTACGCCTGCATCGGCGGCGTGTTCGCCACC ACCAGCAAGGACAACCCCGACCCGCCGGTGGGCCTCGACGGCTTCGCCAGCATCGCCTTCCGCGCCCGCCTCGCCCGTGG GGCCGGCCTGCCGCTCGGCGCCATCGCGGGGATCGGCCTCGACAACGCCGCCGCGGTCGTCGCCGCGGGGGCGGACGGCG TCGCGGTCATCACCGCCCTGTTCGGCGCCGACTCGGTGCGCCAGCGCGCCCACGACCTGCGCGCGCGGATCGACGGCGCC CTGGCGGAGCGGGCCGGCGCCCGATGA
Upstream 100 bases:
>100_bases GCGCGCCGACGGCCGCTTGCCAACGCGGCGAGGCCTGCCCAAACAGGGGCCGGGGCGGGCCGGCACGGGGCCGGCCGAGG CGGATCGAGCGACGACAGCG
Downstream 100 bases:
>100_bases GCGGCCCGGCGCCCATCGCGGTCACGATCGCGGGCTCGGATTCCGGCGGCGGTGCCGGCATCCAGGCGGACCTCAAGACC TTCTCGGCGCTGGGCGTCTA
Product: thiamine-phosphate diphosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MPASATSPANSPANSPAPSSAAGSRAVDLRLYGLLDVGVCGADGARLAELGAEAVAGGCTLLQYREKDIADARAALARIR AILAAVGGRVPVLVNDRVDLALAAGADGVHLGQSDLHPADARRLLGEGAIIGLTLKKPAQADELYRLPVDYACIGGVFAT TSKDNPDPPVGLDGFASIAFRARLARGAGLPLGAIAGIGLDNAAAVVAAGADGVAVITALFGADSVRQRAHDLRARIDGA LAERAGAR
Sequences:
>Translated_248_residues MPASATSPANSPANSPAPSSAAGSRAVDLRLYGLLDVGVCGADGARLAELGAEAVAGGCTLLQYREKDIADARAALARIR AILAAVGGRVPVLVNDRVDLALAAGADGVHLGQSDLHPADARRLLGEGAIIGLTLKKPAQADELYRLPVDYACIGGVFAT TSKDNPDPPVGLDGFASIAFRARLARGAGLPLGAIAGIGLDNAAAVVAAGADGVAVITALFGADSVRQRAHDLRARIDGA LAERAGAR >Mature_247_residues PASATSPANSPANSPAPSSAAGSRAVDLRLYGLLDVGVCGADGARLAELGAEAVAGGCTLLQYREKDIADARAALARIRA ILAAVGGRVPVLVNDRVDLALAAGADGVHLGQSDLHPADARRLLGEGAIIGLTLKKPAQADELYRLPVDYACIGGVFATT SKDNPDPPVGLDGFASIAFRARLARGAGLPLGAIAGIGLDNAAAVVAAGADGVAVITALFGADSVRQRAHDLRARIDGAL AERAGAR
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
Organism=Escherichia coli, GI1790426, Length=172, Percent_Identity=33.7209302325581, Blast_Score=69, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6325042, Length=231, Percent_Identity=29.8701298701299, Blast_Score=94, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 24822; Mature: 24691
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPASATSPANSPANSPAPSSAAGSRAVDLRLYGLLDVGVCGADGARLAELGAEAVAGGCT CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCHH LLQYREKDIADARAALARIRAILAAVGGRVPVLVNDRVDLALAAGADGVHLGQSDLHPAD EEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCCCCCCCCCHHH ARRLLGEGAIIGLTLKKPAQADELYRLPVDYACIGGVFATTSKDNPDPPVGLDGFASIAF HHHHHCCCCEEEEEECCCCCCCCEEECCCCHHHHCCEEEECCCCCCCCCCCCHHHHHHHH RARLARGAGLPLGAIAGIGLDNAAAVVAAGADGVAVITALFGADSVRQRAHDLRARIDGA HHHHHHCCCCCHHHHHCCCCCCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH LAERAGAR HHHHCCCC >Mature Secondary Structure PASATSPANSPANSPAPSSAAGSRAVDLRLYGLLDVGVCGADGARLAELGAEAVAGGCT CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCHH LLQYREKDIADARAALARIRAILAAVGGRVPVLVNDRVDLALAAGADGVHLGQSDLHPAD EEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCCCCCCCCCHHH ARRLLGEGAIIGLTLKKPAQADELYRLPVDYACIGGVFATTSKDNPDPPVGLDGFASIAF HHHHHCCCCEEEEEECCCCCCCCEEECCCCHHHHCCEEEECCCCCCCCCCCCHHHHHHHH RARLARGAGLPLGAIAGIGLDNAAAVVAAGADGVAVITALFGADSVRQRAHDLRARIDGA HHHHHHCCCCCHHHHHCCCCCCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH LAERAGAR HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]