| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170748348
Identifier: 170748348
GI number: 170748348
Start: 2049641
End: 2051152
Strand: Reverse
Name: 170748348
Synonym: Mrad2831_1930
Alternate gene names: NA
Gene position: 2051152-2049641 (Counterclockwise)
Preceding gene: 170748352
Following gene: 170748346
Centisome position: 33.75
GC content: 79.23
Gene sequence:
>1512_bases ATGTCGAGACAGGTGCGGCGCAGTCTCGCCCTGGCGCTCGCCGGCCTCCTCGGCGGACTGGGCCTCGTGCTGGCGCTGTT CGGCGGCGACTCCCTGCGGCGGCTCACCGGCCGCGCCGGCCCCGAGACGTCCGCGTCGTCGGCGCCGGGCGGCAGCCCGC GCGGCCTCGCCGATCCGGGCGCCCTGGCCGGCCGCGCCGACCCGCCGATCGACTTTCGCGACGACAAGCCGGGCCGGGCG CGCCCGGCGCCGGGGGAAGGCCCGGTGGCGGCGCTCCCGCAGGATCCCCGCGCCGGCGCCGCCGGGGCGCCGCAGGCCGG TCCGGGCCGGGACGCCCGCCTGCCGGAGGCGGCCGAGGCGCCGCGCTTCGACATCGTCCGCGTCGAGCCGAACGGCGACG CCGTGGTGGCCGGCCGCGGCGCGCCGGACGCCGCCATCGAGATGCTGGTGGACGGGAAGCCCGTGGCCCGGGCCAAGGCC GACGCCAACGGCCAGTTCGCGATCGTGCCGCCGGCCCTGCCGGCGGGCGCCAGCACCCTCCGCCTGCGCATGACCGGCGC GGACGGGCGCGCGACCGAGTCGCAGCAGAGCGTCGCGGTGGACGTGGCCCCCGGCCGGGACCGCCAGCCCCTCGTGGCCC TGACCGCCCCGGACGCCGCCACCGTCGTGCTGTCGCAGCCCGGCGCGCCCGGGGCGACGGCCGACGCGCAGGGTGGCGCG CACGGCGGCGCGCAGGGTGGCGCGAAGGGCGGCGGATCCGGCACGAGGCCCGGCGCCGAGCCGGGCACCCGGGCCGCCGA CGCGGCGCCGGCCGGGGGCGGGGAGACCCGCGCGGCCGCGGCGTCCGGGTCGGGGCCGACCCGGATCGCCAGCGTGGACG TGCAGGGCAGCGGACGCCTGTTCGTGACGGCCACCGGCACGCCGGGGGCGCGGATCCAGCTCTACCTCAACGACACGCTG ATCGCCCCGGGCAGCATCGGGCCGGACGGCCGGGCGACCTTCACGATCGGGCGCGGGATCAAGCCCGGGCAGTATCAGGT GCGGATCGACCAGGTCGATCCGGCCACCGGCAAGGTCGCCAGCCGCGCGGCGGTCCCCCTCGCGGTGCCGGAGCCGACGC AGGTCGCCGCCCGGGAGACCGCCGAGCCCGCACCGGCCCCTGCCCAGGAGGGCGCGCGGGACCACGGCGGGCGCGATCGG GCCGCGCTGGCCGGTTCCGGTCGGGACGGGTCCGGGCAGGACCGGCCGGCGGCGGCCTCGCCCCCGGCCGCGGTCTCGAA TCCCCAGCTGGCCGACATGGCGGGGCCGGACCGGGTCGGCGCGGTGTTCGTGCCGGAGATCAGCACCGCCCGGATCACCC GCGGCGACAACCTCTGGCGGATCAGCCAGCGCACCTACGGCCGGGGCGAGCGCTACACGGTGATCTACGACGCCAACCAG AACCAGATCCGCGATCCGGACCTGATCTACCCGGGCCAGATCTTCGTGCTGCCCACCGACAAGCGCGGCTGA
Upstream 100 bases:
>100_bases GACCATGTACGGTATTATGGGCGGCGCCGTCGACGGGTTTTCGCGCGGGCGGAGGGCCGCCCGCCGGGCGGCGGCAGGAT GAGGGGAGGCCTTCGTGGCG
Downstream 100 bases:
>100_bases GCGGCCCCGCCTACTCCACCACCTGATCGTCGCCCGCGAAGGCCAGGCGGCGCAGGCCGCGCAGGGCCCGGTCGAGCTCC TCCCGGGACGGCGAGGCCAG
Product: peptidoglycan-binding LysM
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 503; Mature: 502
Protein sequence:
>503_residues MSRQVRRSLALALAGLLGGLGLVLALFGGDSLRRLTGRAGPETSASSAPGGSPRGLADPGALAGRADPPIDFRDDKPGRA RPAPGEGPVAALPQDPRAGAAGAPQAGPGRDARLPEAAEAPRFDIVRVEPNGDAVVAGRGAPDAAIEMLVDGKPVARAKA DANGQFAIVPPALPAGASTLRLRMTGADGRATESQQSVAVDVAPGRDRQPLVALTAPDAATVVLSQPGAPGATADAQGGA HGGAQGGAKGGGSGTRPGAEPGTRAADAAPAGGGETRAAAASGSGPTRIASVDVQGSGRLFVTATGTPGARIQLYLNDTL IAPGSIGPDGRATFTIGRGIKPGQYQVRIDQVDPATGKVASRAAVPLAVPEPTQVAARETAEPAPAPAQEGARDHGGRDR AALAGSGRDGSGQDRPAAASPPAAVSNPQLADMAGPDRVGAVFVPEISTARITRGDNLWRISQRTYGRGERYTVIYDANQ NQIRDPDLIYPGQIFVLPTDKRG
Sequences:
>Translated_503_residues MSRQVRRSLALALAGLLGGLGLVLALFGGDSLRRLTGRAGPETSASSAPGGSPRGLADPGALAGRADPPIDFRDDKPGRA RPAPGEGPVAALPQDPRAGAAGAPQAGPGRDARLPEAAEAPRFDIVRVEPNGDAVVAGRGAPDAAIEMLVDGKPVARAKA DANGQFAIVPPALPAGASTLRLRMTGADGRATESQQSVAVDVAPGRDRQPLVALTAPDAATVVLSQPGAPGATADAQGGA HGGAQGGAKGGGSGTRPGAEPGTRAADAAPAGGGETRAAAASGSGPTRIASVDVQGSGRLFVTATGTPGARIQLYLNDTL IAPGSIGPDGRATFTIGRGIKPGQYQVRIDQVDPATGKVASRAAVPLAVPEPTQVAARETAEPAPAPAQEGARDHGGRDR AALAGSGRDGSGQDRPAAASPPAAVSNPQLADMAGPDRVGAVFVPEISTARITRGDNLWRISQRTYGRGERYTVIYDANQ NQIRDPDLIYPGQIFVLPTDKRG >Mature_502_residues SRQVRRSLALALAGLLGGLGLVLALFGGDSLRRLTGRAGPETSASSAPGGSPRGLADPGALAGRADPPIDFRDDKPGRAR PAPGEGPVAALPQDPRAGAAGAPQAGPGRDARLPEAAEAPRFDIVRVEPNGDAVVAGRGAPDAAIEMLVDGKPVARAKAD ANGQFAIVPPALPAGASTLRLRMTGADGRATESQQSVAVDVAPGRDRQPLVALTAPDAATVVLSQPGAPGATADAQGGAH GGAQGGAKGGGSGTRPGAEPGTRAADAAPAGGGETRAAAASGSGPTRIASVDVQGSGRLFVTATGTPGARIQLYLNDTLI APGSIGPDGRATFTIGRGIKPGQYQVRIDQVDPATGKVASRAAVPLAVPEPTQVAARETAEPAPAPAQEGARDHGGRDRA ALAGSGRDGSGQDRPAAASPPAAVSNPQLADMAGPDRVGAVFVPEISTARITRGDNLWRISQRTYGRGERYTVIYDANQN QIRDPDLIYPGQIFVLPTDKRG
Specific function: Unknown
COG id: COG1652
COG function: function code S; Uncharacterized protein containing LysM domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50372; Mature: 50240
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRQVRRSLALALAGLLGGLGLVLALFGGDSLRRLTGRAGPETSASSAPGGSPRGLADPG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC ALAGRADPPIDFRDDKPGRARPAPGEGPVAALPQDPRAGAAGAPQAGPGRDARLPEAAEA CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHCC PRFDIVRVEPNGDAVVAGRGAPDAAIEMLVDGKPVARAKADANGQFAIVPPALPAGASTL CCEEEEEECCCCCEEEEECCCCHHHEEEEECCCCCEEEECCCCCCEEEECCCCCCCCCEE RLRMTGADGRATESQQSVAVDVAPGRDRQPLVALTAPDAATVVLSQPGAPGATADAQGGA EEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCC HGGAQGGAKGGGSGTRPGAEPGTRAADAAPAGGGETRAAAASGSGPTRIASVDVQGSGRL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCEE FVTATGTPGARIQLYLNDTLIAPGSIGPDGRATFTIGRGIKPGQYQVRIDQVDPATGKVA EEEECCCCCCEEEEEECCEEECCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCHH SRAAVPLAVPEPTQVAARETAEPAPAPAQEGARDHGGRDRAALAGSGRDGSGQDRPAAAS HHCCCEEECCCCHHHHHHHCCCCCCCCHHHCCHHCCCCCCEEEECCCCCCCCCCCCCCCC PPAAVSNPQLADMAGPDRVGAVFVPEISTARITRGDNLWRISQRTYGRGERYTVIYDANQ CCCCCCCCCHHHCCCCCCCCEEEECCCCEEEEECCCCEEEECCCCCCCCCEEEEEEECCC NQIRDPDLIYPGQIFVLPTDKRG CCCCCCCEECCCEEEEEECCCCC >Mature Secondary Structure SRQVRRSLALALAGLLGGLGLVLALFGGDSLRRLTGRAGPETSASSAPGGSPRGLADPG CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC ALAGRADPPIDFRDDKPGRARPAPGEGPVAALPQDPRAGAAGAPQAGPGRDARLPEAAEA CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHCC PRFDIVRVEPNGDAVVAGRGAPDAAIEMLVDGKPVARAKADANGQFAIVPPALPAGASTL CCEEEEEECCCCCEEEEECCCCHHHEEEEECCCCCEEEECCCCCCEEEECCCCCCCCCEE RLRMTGADGRATESQQSVAVDVAPGRDRQPLVALTAPDAATVVLSQPGAPGATADAQGGA EEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCC HGGAQGGAKGGGSGTRPGAEPGTRAADAAPAGGGETRAAAASGSGPTRIASVDVQGSGRL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCEE FVTATGTPGARIQLYLNDTLIAPGSIGPDGRATFTIGRGIKPGQYQVRIDQVDPATGKVA EEEECCCCCCEEEEEECCEEECCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCHH SRAAVPLAVPEPTQVAARETAEPAPAPAQEGARDHGGRDRAALAGSGRDGSGQDRPAAAS HHCCCEEECCCCHHHHHHHCCCCCCCCHHHCCHHCCCCCCEEEECCCCCCCCCCCCCCCC PPAAVSNPQLADMAGPDRVGAVFVPEISTARITRGDNLWRISQRTYGRGERYTVIYDANQ CCCCCCCCCHHHCCCCCCCCEEEECCCCEEEEECCCCEEEECCCCCCCCCEEEEEEECCC NQIRDPDLIYPGQIFVLPTDKRG CCCCCCCEECCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA