Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

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The map label for this gene is ycgI [H]

Identifier: 170748247

GI number: 170748247

Start: 1956063

End: 1956659

Strand: Reverse

Name: ycgI [H]

Synonym: Mrad2831_1829

Alternate gene names: 170748247

Gene position: 1956659-1956063 (Counterclockwise)

Preceding gene: 170748248

Following gene: 170748246

Centisome position: 32.19

GC content: 68.17

Gene sequence:

>597_bases
ATGTGCCAAGACGACGTGCAGACGATCGAGCCGCGCTCCGGCGTCGCCTTCACCCTCGAGCGGGGTCAGCGCCTCACGGT
GATCGACCCGTGCGGGGAGCAGGTGGCCGACCTTCTCGCCTTCAACCGCCACGATACGGGGGAGGTGATCTCGTCGGGCC
GGACCCTCGACTACGCCAGCCGGATCTACCTGACCACCGGTGACCCGCTCTACTCGAACCGCTCCAACATCCTGCTGCGG
ATCGTCGAGGACACGGTGGGGCGGCACGATTTCCTGCTGACGCCGTGCTCGTCCGACACGTTCCGCATCATCTACGGCGA
CACGAACCCGCATCGCGGCTGCTTCGGCAACCTCGCGGCGGCGCTCGCCCCCTACGGCATCGCGCCGGACGCGATCCCGG
TGGCGTTCAACTGCTTCATGAACGTGCCGGTCGACGGCGCGACCGGGGCGCTCACCGTGGCGCCGCCCCTCAGCCGGGCA
GGGGACCGGATCGTGTTCGTGGCCGAGACCGACCTGATCATCGGGCTCACCGCCTGCTCCGCCCTGCAATCCAACAACGG
CAGCTTCAAGCCGATCCACTACAGCGTCAGCGCGTAG

Upstream 100 bases:

>100_bases
GACTGGCACCCGCCGGTCCTGCCCTTCGACCGCGGCCTGCCGGGCAGCGGCGCCTGAGCCGGTCGGATCGCGGGCCTCGA
ACGGAGTGAGCCAACCCACC

Downstream 100 bases:

>100_bases
CTGCAGGCCGTCAAACGGCCCGGCCCGGCCCCGATACTAATCTGTGTAAACCTCTAGACTGAACCGCATTCGCTGACTTG
GCACCGATATTCGCCTCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MCQDDVQTIEPRSGVAFTLERGQRLTVIDPCGEQVADLLAFNRHDTGEVISSGRTLDYASRIYLTTGDPLYSNRSNILLR
IVEDTVGRHDFLLTPCSSDTFRIIYGDTNPHRGCFGNLAAALAPYGIAPDAIPVAFNCFMNVPVDGATGALTVAPPLSRA
GDRIVFVAETDLIIGLTACSALQSNNGSFKPIHYSVSA

Sequences:

>Translated_198_residues
MCQDDVQTIEPRSGVAFTLERGQRLTVIDPCGEQVADLLAFNRHDTGEVISSGRTLDYASRIYLTTGDPLYSNRSNILLR
IVEDTVGRHDFLLTPCSSDTFRIIYGDTNPHRGCFGNLAAALAPYGIAPDAIPVAFNCFMNVPVDGATGALTVAPPLSRA
GDRIVFVAETDLIIGLTACSALQSNNGSFKPIHYSVSA
>Mature_198_residues
MCQDDVQTIEPRSGVAFTLERGQRLTVIDPCGEQVADLLAFNRHDTGEVISSGRTLDYASRIYLTTGDPLYSNRSNILLR
IVEDTVGRHDFLLTPCSSDTFRIIYGDTNPHRGCFGNLAAALAPYGIAPDAIPVAFNCFMNVPVDGATGALTVAPPLSRA
GDRIVFVAETDLIIGLTACSALQSNNGSFKPIHYSVSA

Specific function: Unknown

COG id: COG3665

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018959 [H]

Pfam domain/function: PF09347 DUF1989 [H]

EC number: NA

Molecular weight: Translated: 21252; Mature: 21252

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCQDDVQTIEPRSGVAFTLERGQRLTVIDPCGEQVADLLAFNRHDTGEVISSGRTLDYAS
CCCCCCCCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHCCCCCCHHHHHCCCEEECEE
RIYLTTGDPLYSNRSNILLRIVEDTVGRHDFLLTPCSSDTFRIIYGDTNPHRGCFGNLAA
EEEEEECCCCCCCCCCEEEEEECHHCCCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHH
ALAPYGIAPDAIPVAFNCFMNVPVDGATGALTVAPPLSRAGDRIVFVAETDLIIGLTACS
HHCCCCCCCCCCEEEEEEEEECCCCCCCCEEEECCCCCCCCCEEEEEEECCEEEEEHHHH
ALQSNNGSFKPIHYSVSA
HHHCCCCCCCEEEEEECC
>Mature Secondary Structure
MCQDDVQTIEPRSGVAFTLERGQRLTVIDPCGEQVADLLAFNRHDTGEVISSGRTLDYAS
CCCCCCCCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHCCCCCCHHHHHCCCEEECEE
RIYLTTGDPLYSNRSNILLRIVEDTVGRHDFLLTPCSSDTFRIIYGDTNPHRGCFGNLAA
EEEEEECCCCCCCCCCEEEEEECHHCCCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHH
ALAPYGIAPDAIPVAFNCFMNVPVDGATGALTVAPPLSRAGDRIVFVAETDLIIGLTACS
HHCCCCCCCCCCEEEEEEEEECCCCCCCCEEEECCCCCCCCCEEEEEEECCEEEEEHHHH
ALQSNNGSFKPIHYSVSA
HHHCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 10568751 [H]