| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is ftcR [H]
Identifier: 170748111
GI number: 170748111
Start: 1801524
End: 1802207
Strand: Reverse
Name: ftcR [H]
Synonym: Mrad2831_1693
Alternate gene names: 170748111
Gene position: 1802207-1801524 (Counterclockwise)
Preceding gene: 170748113
Following gene: 170748110
Centisome position: 29.65
GC content: 64.33
Gene sequence:
>684_bases ATGTACGTCATTGTCGATGAGCGGCCGATTGTAACCGATGGATACGTGGCCAACTTCAATCGAGAGGGCATAACATCGGT CGGATTGCTGGCAGACGATTTCGAGGACTGGCTGCAGACCGCCCCCGCGACCGACCTCGAGGCCGTCCAGGGCTTCCTGC TCGGCGACTGCGCGCAGCGATCGGACTTGCCGGAGCTGATCCAGAAGCGGTCGCGCGCACCGATCATCGCGATGATCGAG ACGCGCTGCCTGAACGAAACCCTGAACCTGTTCGGCGCCGGCATCGACGACGTCGTCCGCAAGCCCGTCCACGTCCGGGA GATCCTCGCCCGAACCGAGGCGGTGTGGCGTCGCTCGCAGCGCGAGACCGCGAAGGACCCGACAGTGGTCGACCGGTCCG CACGGCTGAAGGTGTACTTCGACGGGCGCGACCCCGACATCGACGGGGAGAAGATGACGCTGCCCCGCCGCGAACGGCAG ATCCTCGAGTTCCTGGTCCGCAACCGCGGGCGACGGATGACGAAGGAGCAGGTGTTCAACGCTGTCTACGGTGCCTTCAC GAGCGACGTGGACGAGAGCGTGATCGAGGGACACATCAGCAAGCTGCGCAAGAAGCTCCGCCAGAAGCTGAGCTTCGATC CGATCGAGGTCCGGCGCTACCTCGGCTACGCCTTCGTGAACTGA
Upstream 100 bases:
>100_bases TCTCATGCTTGAGCCATGGGATGAAAGCCAGGCAAACAACTTCGATCCAGATCACGCAACACATCTGGAGAGCAATTAAT TCAAACGGAGTCTTGTGGCA
Downstream 100 bases:
>100_bases CGGCCGTGCAGGCCGGTGCCGACACGGACGCGGCCCGCGGCAGCGGGGCCGCGTCCGCGCCGGACGGCGCGTCACCGTCG GCGCTCACGGGCGGCCACCG
Product: two component transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MYVIVDERPIVTDGYVANFNREGITSVGLLADDFEDWLQTAPATDLEAVQGFLLGDCAQRSDLPELIQKRSRAPIIAMIE TRCLNETLNLFGAGIDDVVRKPVHVREILARTEAVWRRSQRETAKDPTVVDRSARLKVYFDGRDPDIDGEKMTLPRRERQ ILEFLVRNRGRRMTKEQVFNAVYGAFTSDVDESVIEGHISKLRKKLRQKLSFDPIEVRRYLGYAFVN
Sequences:
>Translated_227_residues MYVIVDERPIVTDGYVANFNREGITSVGLLADDFEDWLQTAPATDLEAVQGFLLGDCAQRSDLPELIQKRSRAPIIAMIE TRCLNETLNLFGAGIDDVVRKPVHVREILARTEAVWRRSQRETAKDPTVVDRSARLKVYFDGRDPDIDGEKMTLPRRERQ ILEFLVRNRGRRMTKEQVFNAVYGAFTSDVDESVIEGHISKLRKKLRQKLSFDPIEVRRYLGYAFVN >Mature_227_residues MYVIVDERPIVTDGYVANFNREGITSVGLLADDFEDWLQTAPATDLEAVQGFLLGDCAQRSDLPELIQKRSRAPIIAMIE TRCLNETLNLFGAGIDDVVRKPVHVREILARTEAVWRRSQRETAKDPTVVDRSARLKVYFDGRDPDIDGEKMTLPRRERQ ILEFLVRNRGRRMTKEQVFNAVYGAFTSDVDESVIEGHISKLRKKLRQKLSFDPIEVRRYLGYAFVN
Specific function: Required for transcription of flagellar genes [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1789402, Length=210, Percent_Identity=24.7619047619048, Blast_Score=61, Evalue=6e-11, Organism=Escherichia coli, GI1787375, Length=153, Percent_Identity=28.1045751633987, Blast_Score=60, Evalue=1e-10,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR016032 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 26074; Mature: 26074
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVIVDERPIVTDGYVANFNREGITSVGLLADDFEDWLQTAPATDLEAVQGFLLGDCAQR CEEEECCCCCEECCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC SDLPELIQKRSRAPIIAMIETRCLNETLNLFGAGIDDVVRKPVHVREILARTEAVWRRSQ CCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHH RETAKDPTVVDRSARLKVYFDGRDPDIDGEKMTLPRRERQILEFLVRNRGRRMTKEQVFN HHCCCCCCEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH AVYGAFTSDVDESVIEGHISKLRKKLRQKLSFDPIEVRRYLGYAFVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MYVIVDERPIVTDGYVANFNREGITSVGLLADDFEDWLQTAPATDLEAVQGFLLGDCAQR CEEEECCCCCEECCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC SDLPELIQKRSRAPIIAMIETRCLNETLNLFGAGIDDVVRKPVHVREILARTEAVWRRSQ CCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHH RETAKDPTVVDRSARLKVYFDGRDPDIDGEKMTLPRRERQILEFLVRNRGRRMTKEQVFN HHCCCCCCEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH AVYGAFTSDVDESVIEGHISKLRKKLRQKLSFDPIEVRRYLGYAFVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA