| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
Click here to switch to the map view.
The map label for this gene is yehQ [H]
Identifier: 170747810
GI number: 170747810
Start: 1456349
End: 1458325
Strand: Reverse
Name: yehQ [H]
Synonym: Mrad2831_1392
Alternate gene names: 170747810
Gene position: 1458325-1456349 (Counterclockwise)
Preceding gene: 170747811
Following gene: 170747809
Centisome position: 23.99
GC content: 81.08
Gene sequence:
>1977_bases ATGGCCCGCCCCGACCTCCGCGCCCTCACGGATGACGGCCTGATCCAGCTCGCCAATGCCGGGCTGGTGAAGCGCGCGCT GCGCGAGGTCGCCGCCGGCGCGGGGCCGGCCCTCGCGGAAGCCGGGGACGGCACCGTCGAGGCGCGCTTCGCCGACGGCA CGGTCACGCGGCTCGGCCCCGGCCGGCCCCCCGACGCGGCCACCTGCACCTGCCCGGCGAGCGGGATGTGCCGGCACCGG GTCGCCCTCGTCGTCGCCTACCGGGCGGCCGTCGCGGACGGGCCGGTCGAGGGGGCCGCCGAGGGACCCACAGAGGAGAC TGCCGAGCGGACTGCCGTCCCGGCCGCGGCGGCGGTCGCCTGGGATCCCGGCACCCTCGACGGCGCCACCGTCGAGGCGG GGCTCGGCGGCGCGGCGGCGGCGGAGCTGCGGCGCCTCCTGGCGGGTGGGATCACGGTCGGGCTGGAGCGGGGCGCCGTG CCCGCCGCGCGGCTCCCGACCGCGACCGTGCGCTTCCTCGTGCCCGACGCCGTCGGCTATGCCCGCTGCGACTGCGCGGC CGGGGGTGGTTGCGCCCACGTCGCCCTGGCGATCCGCGCCTTCCGGGAGGCCGCGGGCGCCCCCGAGATCCGCCTGGGCG GCGCGGTGCCGGCCAGGACCGCTACGGCCGCGACGCCCGCGGAGGACGGACTCGCGGAGGCCGCCGACCGGGTGGTCGCC GGCCTGCTGGAGGCCGGGGTGGTCTCCGGGCCGGAGGCCCACGACGCCGCCCTCGTCCGGCTGCGGCGGGCGGCCGAGAG GCGGGGCGCCACGCAGGTTCTGCTGGCGGAGGCGGAACTCACCGATCAGCTCGCGGCCTATGCCGGGCGCCACGCCGCCT ACGACGCGGCCGTCGTCCTGGCGCTCGCCGCGGAACTCCTCGGCCGCGTCCGGGGCGGGGCGGTCGCCCTCGGCCTCGGC CAGCCCTACGAGACCGCCATGGGCAAGACCCGCCTCGTCTCGCTGGGCGCGAGGTTCCTCGCCCGCGGGCGCGGCGCCGC CGCCCGGGTGGCCCTGGCCGACACCGACACCGGCGCGCTCCTGGCGCTGGAGCGCGCGTTCGCGCCGGGCGAGGCCGAGG CGGACGTCGTGGCCGGCCTGCCCGGGCGCCTCCTGAGCCCCGGCCTGTCCGTCGCGGGCACCGGCCAGGGCCAGATCCTG ACCAGCGTCGCCCGGCGCCGGGCCGACGGGCTCCTCGCCCTCGGCCAGGGCGCGCGGGGCCGGACGGCGCTGCTGCCGCG GGACGCCCGCGTGCGGCTCCCGGCCCCCCTGGCGGCGCGGGACGTTTCGTCGGTCCTGCGCCGCCTCGCCGACCGGCCGC CCGCCTTCCTGCGCCCGCGCGACCGGCTGGAGGCCTTCCACGTCTTCGCCGTCGAGGCGGTCCTCGGACAGGCCTGGGCG CCGGGCGCCCAGACGTGGCAGGCCGCCGTCGAACTGCCGGAGGCGGGCGGCACGCTCCATCTCGCCCGCGCCTACGACCC CGCCGCGCCGCACGCGCTGGACGCCCTCGCGGGCGCCTGCTCGGGGCGCTGGGGACCGGTGCGGCAGGTCGCCGGCCCGG TGCGGATCGAGGACGGCGCCCTGGTCTGCGATCCCTGGTCGGTGTCGGCCGACCGGCTCGTCGTGCCCGACCTCGCCGCC CCGGACGGCGCCGGCCACCCGATCCCGCCGGCGCCGGACCTGGGGCCGGCCACGCTCCTCGACGAGGCGGCCGCGCTCCT GGCGAACGCCCTCCATGCCGGGCGGCGGGCCTTCGCGGCCAGCGCCCGCGCCGGCGGCGCCGACTTGGTCGCACGCCTCG CCGCGGCGGGCCATCCGGCCACCGCCGCGCGGCTCTCGGCCTTCCTCGCCGCCCCGGCCGCGGAGCCCGGCCCCTTCGCC CGGGCCGCCCTCTGGGTCGCCGCCATGCGCGACGATCCCGGGCCGGCGGAGGGCTGA
Upstream 100 bases:
>100_bases GGCGCAGCGGCTCGTGGCGGCCGGCGCCGAGATCGGCGCGATGACGCCCGGCGAGCTCGCCGGCTGGCTCGCCGCCGCGA TCCGGGCCTGAGCGGCGCCG
Downstream 100 bases:
>100_bases TCACGGAACCGTGTGGATGCGGTTGCCCCTGCGGCCCCGCTGGGGCAGGTTGCCGCGCCATCGGGCGCCGCGATTCGCCG GCCGGCCCGTCCCGGTCGTT
Product: zinc finger SWIM domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 658; Mature: 657
Protein sequence:
>658_residues MARPDLRALTDDGLIQLANAGLVKRALREVAAGAGPALAEAGDGTVEARFADGTVTRLGPGRPPDAATCTCPASGMCRHR VALVVAYRAAVADGPVEGAAEGPTEETAERTAVPAAAAVAWDPGTLDGATVEAGLGGAAAAELRRLLAGGITVGLERGAV PAARLPTATVRFLVPDAVGYARCDCAAGGGCAHVALAIRAFREAAGAPEIRLGGAVPARTATAATPAEDGLAEAADRVVA GLLEAGVVSGPEAHDAALVRLRRAAERRGATQVLLAEAELTDQLAAYAGRHAAYDAAVVLALAAELLGRVRGGAVALGLG QPYETAMGKTRLVSLGARFLARGRGAAARVALADTDTGALLALERAFAPGEAEADVVAGLPGRLLSPGLSVAGTGQGQIL TSVARRRADGLLALGQGARGRTALLPRDARVRLPAPLAARDVSSVLRRLADRPPAFLRPRDRLEAFHVFAVEAVLGQAWA PGAQTWQAAVELPEAGGTLHLARAYDPAAPHALDALAGACSGRWGPVRQVAGPVRIEDGALVCDPWSVSADRLVVPDLAA PDGAGHPIPPAPDLGPATLLDEAAALLANALHAGRRAFAASARAGGADLVARLAAAGHPATAARLSAFLAAPAAEPGPFA RAALWVAAMRDDPGPAEG
Sequences:
>Translated_658_residues MARPDLRALTDDGLIQLANAGLVKRALREVAAGAGPALAEAGDGTVEARFADGTVTRLGPGRPPDAATCTCPASGMCRHR VALVVAYRAAVADGPVEGAAEGPTEETAERTAVPAAAAVAWDPGTLDGATVEAGLGGAAAAELRRLLAGGITVGLERGAV PAARLPTATVRFLVPDAVGYARCDCAAGGGCAHVALAIRAFREAAGAPEIRLGGAVPARTATAATPAEDGLAEAADRVVA GLLEAGVVSGPEAHDAALVRLRRAAERRGATQVLLAEAELTDQLAAYAGRHAAYDAAVVLALAAELLGRVRGGAVALGLG QPYETAMGKTRLVSLGARFLARGRGAAARVALADTDTGALLALERAFAPGEAEADVVAGLPGRLLSPGLSVAGTGQGQIL TSVARRRADGLLALGQGARGRTALLPRDARVRLPAPLAARDVSSVLRRLADRPPAFLRPRDRLEAFHVFAVEAVLGQAWA PGAQTWQAAVELPEAGGTLHLARAYDPAAPHALDALAGACSGRWGPVRQVAGPVRIEDGALVCDPWSVSADRLVVPDLAA PDGAGHPIPPAPDLGPATLLDEAAALLANALHAGRRAFAASARAGGADLVARLAAAGHPATAARLSAFLAAPAAEPGPFA RAALWVAAMRDDPGPAEG >Mature_657_residues ARPDLRALTDDGLIQLANAGLVKRALREVAAGAGPALAEAGDGTVEARFADGTVTRLGPGRPPDAATCTCPASGMCRHRV ALVVAYRAAVADGPVEGAAEGPTEETAERTAVPAAAAVAWDPGTLDGATVEAGLGGAAAAELRRLLAGGITVGLERGAVP AARLPTATVRFLVPDAVGYARCDCAAGGGCAHVALAIRAFREAAGAPEIRLGGAVPARTATAATPAEDGLAEAADRVVAG LLEAGVVSGPEAHDAALVRLRRAAERRGATQVLLAEAELTDQLAAYAGRHAAYDAAVVLALAAELLGRVRGGAVALGLGQ PYETAMGKTRLVSLGARFLARGRGAAARVALADTDTGALLALERAFAPGEAEADVVAGLPGRLLSPGLSVAGTGQGQILT SVARRRADGLLALGQGARGRTALLPRDARVRLPAPLAARDVSSVLRRLADRPPAFLRPRDRLEAFHVFAVEAVLGQAWAP GAQTWQAAVELPEAGGTLHLARAYDPAAPHALDALAGACSGRWGPVRQVAGPVRIEDGALVCDPWSVSADRLVVPDLAAP DGAGHPIPPAPDLGPATLLDEAAALLANALHAGRRAFAASARAGGADLVARLAAAGHPATAARLSAFLAAPAAEPGPFAR AALWVAAMRDDPGPAEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 SWIM-type zinc fingers [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007527 [H]
Pfam domain/function: PF04434 SWIM [H]
EC number: NA
Molecular weight: Translated: 66047; Mature: 65916
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: PS50966 ZF_SWIM ; PS00778 HIS_ACID_PHOSPHAT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPDLRALTDDGLIQLANAGLVKRALREVAAGAGPALAEAGDGTVEARFADGTVTRLGP CCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCHHCCCCCCEEEEECCCCEEECCC GRPPDAATCTCPASGMCRHRVALVVAYRAAVADGPVEGAAEGPTEETAERTAVPAAAAVA CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHEEE WDPGTLDGATVEAGLGGAAAAELRRLLAGGITVGLERGAVPAARLPTATVRFLVPDAVGY ECCCCCCCCEEECCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEECCCCCCC ARCDCAAGGGCAHVALAIRAFREAAGAPEIRLGGAVPARTATAATPAEDGLAEAADRVVA CEECCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH GLLEAGVVSGPEAHDAALVRLRRAAERRGATQVLLAEAELTDQLAAYAGRHAAYDAAVVL HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHH ALAAELLGRVRGGAVALGLGQPYETAMGKTRLVSLGARFLARGRGAAARVALADTDTGAL HHHHHHHHHHCCCEEEEECCCCHHHHHCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCE LALERAFAPGEAEADVVAGLPGRLLSPGLSVAGTGQGQILTSVARRRADGLLALGQGARG EEHHHHCCCCCCCCHHCCCCCCHHHCCCCCEECCCCCHHHHHHHHHHCCCEEEECCCCCC RTALLPRDARVRLPAPLAARDVSSVLRRLADRPPAFLRPRDRLEAFHVFAVEAVLGQAWA CEEECCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC PGAQTWQAAVELPEAGGTLHLARAYDPAAPHALDALAGACSGRWGPVRQVAGPVRIEDGA CCHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHCCCEEECCCE LVCDPWSVSADRLVVPDLAAPDGAGHPIPPAPDLGPATLLDEAAALLANALHAGRRAFAA EEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SARAGGADLVARLAAAGHPATAARLSAFLAAPAAEPGPFARAALWVAAMRDDPGPAEG HCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ARPDLRALTDDGLIQLANAGLVKRALREVAAGAGPALAEAGDGTVEARFADGTVTRLGP CCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCHHCCCCCCEEEEECCCCEEECCC GRPPDAATCTCPASGMCRHRVALVVAYRAAVADGPVEGAAEGPTEETAERTAVPAAAAVA CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHEEE WDPGTLDGATVEAGLGGAAAAELRRLLAGGITVGLERGAVPAARLPTATVRFLVPDAVGY ECCCCCCCCEEECCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEECCCCCCC ARCDCAAGGGCAHVALAIRAFREAAGAPEIRLGGAVPARTATAATPAEDGLAEAADRVVA CEECCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH GLLEAGVVSGPEAHDAALVRLRRAAERRGATQVLLAEAELTDQLAAYAGRHAAYDAAVVL HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHH ALAAELLGRVRGGAVALGLGQPYETAMGKTRLVSLGARFLARGRGAAARVALADTDTGAL HHHHHHHHHHCCCEEEEECCCCHHHHHCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCE LALERAFAPGEAEADVVAGLPGRLLSPGLSVAGTGQGQILTSVARRRADGLLALGQGARG EEHHHHCCCCCCCCHHCCCCCCHHHCCCCCEECCCCCHHHHHHHHHHCCCEEEECCCCCC RTALLPRDARVRLPAPLAARDVSSVLRRLADRPPAFLRPRDRLEAFHVFAVEAVLGQAWA CEEECCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC PGAQTWQAAVELPEAGGTLHLARAYDPAAPHALDALAGACSGRWGPVRQVAGPVRIEDGA CCHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHCCCEEECCCE LVCDPWSVSADRLVVPDLAAPDGAGHPIPPAPDLGPATLLDEAAALLANALHAGRRAFAA EEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SARAGGADLVARLAAAGHPATAARLSAFLAAPAAEPGPFARAALWVAAMRDDPGPAEG HCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]