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The map label for this gene is ytfH [C]

Identifier: 170747788

GI number: 170747788

Start: 1431059

End: 1431439

Strand: Reverse

Name: ytfH [C]

Synonym: Mrad2831_1367

Alternate gene names: 170747788

Gene position: 1431439-1431059 (Counterclockwise)

Preceding gene: 170747796

Following gene: 170747786

Centisome position: 23.55

GC content: 64.04

Gene sequence:

>381_bases
ATGGATGTGACTGTCCATCGCCCCGAGCATTCGGCGGGATGCATGCGGGTCTCGAAGATCCTTTCCCGCATCGGCGACAA
GTGGACCGTCCTCGTCATCATGCTCCTGCGCGACCGGTCGCGTCGGTTCAGCGAGTTGAAGCGCGGTGTCGAGGGGATTT
CCCAGCGGATGCTGACCCTCACTCTGCGGAATCTGGAGCGGGATGGGCTCGTGACGCGAACGGTGACGCCCTCCATCCCG
CCGCGGGTCGATTATGAACTGACGGAACTCGGGCACTCCCTGGCGGGGCCGATCCAGGCCCTCGGGGCGTGGGCGTTCGA
TAACATGGCGCAGATCGATGCGGCTCAGACTGCCTACGACGCGAAGGAGAAGGCTGTCTGA

Upstream 100 bases:

>100_bases
CGTGGGTTCCTTAGCAGGCCTCGGTTTCGTTTAGTGACCGCGTTATGATACGAGCCCCGTCTCCTCCTGCAAGACGGCAC
AGGAAGGGTACCGAGGTTAC

Downstream 100 bases:

>100_bases
GACGGAACGGTCGCCGTCTGCCTCGACGCGCGTACCGCGCGGAAGCGGACCGGCGGAGACCGGCCCGCGACGGCTGTTCG
GTCCGCCGCGTTCGTGGTTG

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MDVTVHRPEHSAGCMRVSKILSRIGDKWTVLVIMLLRDRSRRFSELKRGVEGISQRMLTLTLRNLERDGLVTRTVTPSIP
PRVDYELTELGHSLAGPIQALGAWAFDNMAQIDAAQTAYDAKEKAV

Sequences:

>Translated_126_residues
MDVTVHRPEHSAGCMRVSKILSRIGDKWTVLVIMLLRDRSRRFSELKRGVEGISQRMLTLTLRNLERDGLVTRTVTPSIP
PRVDYELTELGHSLAGPIQALGAWAFDNMAQIDAAQTAYDAKEKAV
>Mature_126_residues
MDVTVHRPEHSAGCMRVSKILSRIGDKWTVLVIMLLRDRSRRFSELKRGVEGISQRMLTLTLRNLERDGLVTRTVTPSIP
PRVDYELTELGHSLAGPIQALGAWAFDNMAQIDAAQTAYDAKEKAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=96, Percent_Identity=36.4583333333333, Blast_Score=83, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 14117; Mature: 14117

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVTVHRPEHSAGCMRVSKILSRIGDKWTVLVIMLLRDRSRRFSELKRGVEGISQRMLTL
CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLRNLERDGLVTRTVTPSIPPRVDYELTELGHSLAGPIQALGAWAFDNMAQIDAAQTAYD
HHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
AKEKAV
HHHCCC
>Mature Secondary Structure
MDVTVHRPEHSAGCMRVSKILSRIGDKWTVLVIMLLRDRSRRFSELKRGVEGISQRMLTL
CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLRNLERDGLVTRTVTPSIPPRVDYELTELGHSLAGPIQALGAWAFDNMAQIDAAQTAYD
HHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
AKEKAV
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]