| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170747732
Identifier: 170747732
GI number: 170747732
Start: 1367992
End: 1368903
Strand: Reverse
Name: 170747732
Synonym: Mrad2831_1311
Alternate gene names: NA
Gene position: 1368903-1367992 (Counterclockwise)
Preceding gene: 170747733
Following gene: 170747730
Centisome position: 22.52
GC content: 70.07
Gene sequence:
>912_bases ATGATCGACTCGGTGATGCTCTGGAACGAGCCCAACAACAAGTCGCACTGGGATCCCGAGATCGACCCCGACTGGCTGCT CTTCGCCGAGATGGCCAAGGAGGCGGGGCACGCGGTCCGGGCGGCGAACCCGAACCTGACGCGCGTCCTCGGCGGCATCT CGCCGATCGACCCGGTCTTCATCCGCAACATGGAGGGGCGCGGCGTCCTCGACGCCGTCGACGCCGTGGCGGTGCACGGC TTCCCCCTCGACTGGAACCTGTGGTCGGTCCACGACTGGCCGGCCAAGCTGGAGGAGATCCGCGCGGTCACCGACCTGCC GATCTGGGTCTCGGAGGTCGGCGTCTCGACCTTCGGCGCCGAGGAGGTGCAGGATTGGGGCCTGCGCCGGACCCTCGAGC TGCTCTCCGGCCGGGCGCCGCGGATCCACTGGTACAGCCTCTACGACCTGCCGCGGGAATGGGAGGCCACCACCCGCCAC AAGGAGGCCGAGGGCTCGTCCTATTACCGGCACTTCCACATGGGCCTGCTCCGGCAGGACGGCACCCCGAAGATCGCCCT GGAGAGCTTCGCCCGCCACACGCCGGAGATCGGCCTGTGCCAGTGGTTCCACTTCGAGGACCACCGGCTCGACGAGGCCG TCGCGTGGATGAAGCGGCTCGGCGTGCGCTACCTGCGCACCGGCCTGTCCTGGGCCGACAGCTTCCGGCCCGGGGCGCTG GACTGGTTCGACCGGCAGATGACGGCGCTGCAGGATTTCGACGTCACCGTCACCTTCTGCTTCACCCCGGAGCATCGGGG GATCTCGCCCCATCACACCAGCGCGCCGCTGGTCCGCGCCGAGTTCGCGGAGTTCTGCGCCGCCATGGTCCGCCGCTACG CCCCCGGGCCCCTGCCGGGCACGACCTGGTAG
Upstream 100 bases:
>100_bases CCGAGGCGGAGGTCTACCTCTGCCGCACCGCGCCGGTCCCCTACGGGGTGGGGGCCGAATATCCCGCGCGGGCGGAGGCT CACGGACGCGGGGGAACGCG
Downstream 100 bases:
>100_bases AGCGCGCGGCCCGCCGGCCGGGCCATCGCGGGAAAGCAGGCGCGGGCCGGCAGCCGCGGGAACGTGCGCCGGCCTCATCC GGATGGGGGATGCGGGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Nucleoside Diphosphate Epimerase Protein; Beta-Xylosidase; Transglycosidase
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MIDSVMLWNEPNNKSHWDPEIDPDWLLFAEMAKEAGHAVRAANPNLTRVLGGISPIDPVFIRNMEGRGVLDAVDAVAVHG FPLDWNLWSVHDWPAKLEEIRAVTDLPIWVSEVGVSTFGAEEVQDWGLRRTLELLSGRAPRIHWYSLYDLPREWEATTRH KEAEGSSYYRHFHMGLLRQDGTPKIALESFARHTPEIGLCQWFHFEDHRLDEAVAWMKRLGVRYLRTGLSWADSFRPGAL DWFDRQMTALQDFDVTVTFCFTPEHRGISPHHTSAPLVRAEFAEFCAAMVRRYAPGPLPGTTW
Sequences:
>Translated_303_residues MIDSVMLWNEPNNKSHWDPEIDPDWLLFAEMAKEAGHAVRAANPNLTRVLGGISPIDPVFIRNMEGRGVLDAVDAVAVHG FPLDWNLWSVHDWPAKLEEIRAVTDLPIWVSEVGVSTFGAEEVQDWGLRRTLELLSGRAPRIHWYSLYDLPREWEATTRH KEAEGSSYYRHFHMGLLRQDGTPKIALESFARHTPEIGLCQWFHFEDHRLDEAVAWMKRLGVRYLRTGLSWADSFRPGAL DWFDRQMTALQDFDVTVTFCFTPEHRGISPHHTSAPLVRAEFAEFCAAMVRRYAPGPLPGTTW >Mature_303_residues MIDSVMLWNEPNNKSHWDPEIDPDWLLFAEMAKEAGHAVRAANPNLTRVLGGISPIDPVFIRNMEGRGVLDAVDAVAVHG FPLDWNLWSVHDWPAKLEEIRAVTDLPIWVSEVGVSTFGAEEVQDWGLRRTLELLSGRAPRIHWYSLYDLPREWEATTRH KEAEGSSYYRHFHMGLLRQDGTPKIALESFARHTPEIGLCQWFHFEDHRLDEAVAWMKRLGVRYLRTGLSWADSFRPGAL DWFDRQMTALQDFDVTVTFCFTPEHRGISPHHTSAPLVRAEFAEFCAAMVRRYAPGPLPGTTW
Specific function: Unknown
COG id: COG3664
COG function: function code G; Beta-xylosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34770; Mature: 34770
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDSVMLWNEPNNKSHWDPEIDPDWLLFAEMAKEAGHAVRAANPNLTRVLGGISPIDPVF CCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEECCCCCHHHHHCCCCCCCHHH IRNMEGRGVLDAVDAVAVHGFPLDWNLWSVHDWPAKLEEIRAVTDLPIWVSEVGVSTFGA EECCCCCCHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHCCHHCCH EEVQDWGLRRTLELLSGRAPRIHWYSLYDLPREWEATTRHKEAEGSSYYRHFHMGLLRQD HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCC GTPKIALESFARHTPEIGLCQWFHFEDHRLDEAVAWMKRLGVRYLRTGLSWADSFRPGAL CCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCH DWFDRQMTALQDFDVTVTFCFTPEHRGISPHHTSAPLVRAEFAEFCAAMVRRYAPGPLPG HHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC TTW CCC >Mature Secondary Structure MIDSVMLWNEPNNKSHWDPEIDPDWLLFAEMAKEAGHAVRAANPNLTRVLGGISPIDPVF CCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEECCCCCHHHHHCCCCCCCHHH IRNMEGRGVLDAVDAVAVHGFPLDWNLWSVHDWPAKLEEIRAVTDLPIWVSEVGVSTFGA EECCCCCCHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHCCHHCCH EEVQDWGLRRTLELLSGRAPRIHWYSLYDLPREWEATTRHKEAEGSSYYRHFHMGLLRQD HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCC GTPKIALESFARHTPEIGLCQWFHFEDHRLDEAVAWMKRLGVRYLRTGLSWADSFRPGAL CCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCH DWFDRQMTALQDFDVTVTFCFTPEHRGISPHHTSAPLVRAEFAEFCAAMVRRYAPGPLPG HHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC TTW CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA