| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170747723
Identifier: 170747723
GI number: 170747723
Start: 1358271
End: 1360037
Strand: Reverse
Name: 170747723
Synonym: Mrad2831_1301
Alternate gene names: NA
Gene position: 1360037-1358271 (Counterclockwise)
Preceding gene: 170747724
Following gene: 170747719
Centisome position: 22.38
GC content: 77.02
Gene sequence:
>1767_bases ATGCCGCTCCGCTTCCGGTTCCGCACCCCGCTCCCGCTTCTGCGCTCTCGGCCGCGTTCTCCGACCCTGTCGCTGACGAC CCGCATCCTGCTGCTCGTCCTGCTCGCCCTCGCCCCGGCGCTGGCGATCCAGGGCTACAACGAGGTCGCCCTGCGGGCGA GCCGCGACGCGGCCGTGCGGGCCGACGCCCGCGCCACCGCGCGCGACGTGGCGGAGGATTTCGCGCAGGTCTCCGACCGG ATGCAGCAGGCCCTCGATCTGATCTCCGGGGACGCCACCGTGCAGGCGCGGGAGCCGGCGGCCTGCACCGCCTACCTGCG GCGGGCGGCCGCGCGGCTGCCGCACGTGCTGCTGATCGCCCTCACCGATCCCGAGGGGGCCGTGATCTGCGACAGCGCCG GCGCGCCCGCGGGCTCCTACTCGAGCCGCGGCCGGGCCTATCACCGCCGCGCCCTGGAGCGGGGCGGCTACGCAGTCGGC GGCTACGCGGTCGGCTTCCAGACACGGCGGCCGTCGATCCACTTCGCCCGGGCCGTCCACGCCGGCGACTCCGGGGGGGC GCCCGCGGGCGTCCTGCTCGCCGCCGTCGACCTCGACTGGCTCTCCGATCATCTGGAACAGGCGCTCCATCAGGCGGAGA CGGCGATCACCGTGACGGACCGCGACGGCCTGATCATCGCCCGCCGCCCGGACGAGGCGGCCTGGATCGGCAGGCCGATC CCGCCCGACCGGGTCGCCATGCTGGAGGCCCAGGGCAGCGACGTCCGCGTCGCCGCGGGCCTCGACGGCCGCCAGCGGAT CATCGCCACCGCGATGCCGGACGGCCCGCTGGCGGGGGTGCGCGTCGTCGTCGGGCGCGACCACGCCACCGCCTTCGCGG ACATCGACGCCGCCACCCGCCGCGGCCTGGTGCTGATCGCCCTCGGGGCGGCCCTGGCGCTCGCCGCCGCCCTCGTGGCC GGGCGGGTGTTCATCCGCCGCCCGGTCGAGCGGCTCCTGCGCACCGCGGCGGCGTGGCAGGCCGGCGACCTCGCCGCCCG CACCGGCCTGCACGGCGCCGCGGAGTTCGACCGGCTGGGCAGCAAGCTCGACGCCATGGCCGCCACCCTCCAGCGCAGCA CCGCCGAGCTGCGCGCCGAGATCCAGCGCGGCCGCGCCCTGCAGGCGCAGCAGGGCACGATGCTGCACGAGCTGAACCAC CGGGTGAAGAACACCCTGGCCACCGTCCAGGCCCTCGCCCGGCAGTCCCGCGGCTCCGCCGAGGTCCTGGAGGCGCGGAT CCTGGCCCTGTCGAAGACCCACGACCTCCTGACCCGCGAGGACTGGAGCGGGGCTCCCCTGCGCGAGGTGCTGGAGAGCG AGCTCGGCCCGTACCGGACCGGCGGCGACCAGATCCGTCTGGACGGGCCGGACGTGTCGCTGAGCCCCCGCGAGGTGCTG GCGCTCGGCCTGACGGTCCACGAGCTGACCACCAACGCCGCCAAGTACGGCGCCCTCTCGGTCCGCGAGGGCCGCGTCCG GGTGGCGTGGTCGGTCGCCGCCGGCGCGGCGGGGGAGCGGCGGCTGCGGCTCAGCTGGGAGGAGCGCGGCGGCCCGCCGG TGCGGGCGCCGACCCGGGTGGGCTTCGGGACGCGGCTGATCGCCGGCGGCGTGCGGCGCGAACTCGCCGGCACGGTCGAC CTCGCCTTCGAGGCCGCGGGCCTGCGCTGCCGGCTCGACGTGCCGCTCGATCCGGGCCTCGGCACCATGCTGGCACCGAC GGGCTAG
Upstream 100 bases:
>100_bases CGCCCTCGAACCGGGGATGCGGATGAGCACCGCGCCGCTCTCCGTGGAGACCCTGGCCGCGCGGGCGCGCGCGCCGATCG CCGGTCTCGACTGACCGCCG
Downstream 100 bases:
>100_bases GACCGGCGTGGCTCGGCCGAATCGCGCCGTTTGAGCAAGGACTTGGATCCGGATCCGGACAGACCGGTCGAGCGCGCCCG GACCGGTACGCGCGGCGAAC
Product: signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 588; Mature: 587
Protein sequence:
>588_residues MPLRFRFRTPLPLLRSRPRSPTLSLTTRILLLVLLALAPALAIQGYNEVALRASRDAAVRADARATARDVAEDFAQVSDR MQQALDLISGDATVQAREPAACTAYLRRAAARLPHVLLIALTDPEGAVICDSAGAPAGSYSSRGRAYHRRALERGGYAVG GYAVGFQTRRPSIHFARAVHAGDSGGAPAGVLLAAVDLDWLSDHLEQALHQAETAITVTDRDGLIIARRPDEAAWIGRPI PPDRVAMLEAQGSDVRVAAGLDGRQRIIATAMPDGPLAGVRVVVGRDHATAFADIDAATRRGLVLIALGAALALAAALVA GRVFIRRPVERLLRTAAAWQAGDLAARTGLHGAAEFDRLGSKLDAMAATLQRSTAELRAEIQRGRALQAQQGTMLHELNH RVKNTLATVQALARQSRGSAEVLEARILALSKTHDLLTREDWSGAPLREVLESELGPYRTGGDQIRLDGPDVSLSPREVL ALGLTVHELTTNAAKYGALSVREGRVRVAWSVAAGAAGERRLRLSWEERGGPPVRAPTRVGFGTRLIAGGVRRELAGTVD LAFEAAGLRCRLDVPLDPGLGTMLAPTG
Sequences:
>Translated_588_residues MPLRFRFRTPLPLLRSRPRSPTLSLTTRILLLVLLALAPALAIQGYNEVALRASRDAAVRADARATARDVAEDFAQVSDR MQQALDLISGDATVQAREPAACTAYLRRAAARLPHVLLIALTDPEGAVICDSAGAPAGSYSSRGRAYHRRALERGGYAVG GYAVGFQTRRPSIHFARAVHAGDSGGAPAGVLLAAVDLDWLSDHLEQALHQAETAITVTDRDGLIIARRPDEAAWIGRPI PPDRVAMLEAQGSDVRVAAGLDGRQRIIATAMPDGPLAGVRVVVGRDHATAFADIDAATRRGLVLIALGAALALAAALVA GRVFIRRPVERLLRTAAAWQAGDLAARTGLHGAAEFDRLGSKLDAMAATLQRSTAELRAEIQRGRALQAQQGTMLHELNH RVKNTLATVQALARQSRGSAEVLEARILALSKTHDLLTREDWSGAPLREVLESELGPYRTGGDQIRLDGPDVSLSPREVL ALGLTVHELTTNAAKYGALSVREGRVRVAWSVAAGAAGERRLRLSWEERGGPPVRAPTRVGFGTRLIAGGVRRELAGTVD LAFEAAGLRCRLDVPLDPGLGTMLAPTG >Mature_587_residues PLRFRFRTPLPLLRSRPRSPTLSLTTRILLLVLLALAPALAIQGYNEVALRASRDAAVRADARATARDVAEDFAQVSDRM QQALDLISGDATVQAREPAACTAYLRRAAARLPHVLLIALTDPEGAVICDSAGAPAGSYSSRGRAYHRRALERGGYAVGG YAVGFQTRRPSIHFARAVHAGDSGGAPAGVLLAAVDLDWLSDHLEQALHQAETAITVTDRDGLIIARRPDEAAWIGRPIP PDRVAMLEAQGSDVRVAAGLDGRQRIIATAMPDGPLAGVRVVVGRDHATAFADIDAATRRGLVLIALGAALALAAALVAG RVFIRRPVERLLRTAAAWQAGDLAARTGLHGAAEFDRLGSKLDAMAATLQRSTAELRAEIQRGRALQAQQGTMLHELNHR VKNTLATVQALARQSRGSAEVLEARILALSKTHDLLTREDWSGAPLREVLESELGPYRTGGDQIRLDGPDVSLSPREVLA LGLTVHELTTNAAKYGALSVREGRVRVAWSVAAGAAGERRLRLSWEERGGPPVRAPTRVGFGTRLIAGGVRRELAGTVDL AFEAAGLRCRLDVPLDPGLGTMLAPTG
Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light [H]
COG id: COG3920
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR013655 - InterPro: IPR011102 [H]
Pfam domain/function: PF07536 HWE_HK; PF00989 PAS; PF08447 PAS_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 62554; Mature: 62423
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: PS50885 HAMP ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLRFRFRTPLPLLRSRPRSPTLSLTTRILLLVLLALAPALAIQGYNEVALRASRDAAVR CCCEEECCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCHHHH ADARATARDVAEDFAQVSDRMQQALDLISGDATVQAREPAACTAYLRRAAARLPHVLLIA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEE LTDPEGAVICDSAGAPAGSYSSRGRAYHRRALERGGYAVGGYAVGFQTRRPSIHFARAVH EECCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCEEECEEEEEEECCCCCEEEEHEEE AGDSGGAPAGVLLAAVDLDWLSDHLEQALHQAETAITVTDRDGLIIARRPDEAAWIGRPI CCCCCCCCHHHEEEEHHHHHHHHHHHHHHHHHHCEEEEECCCCEEEEECCCCCCCCCCCC PPDRVAMLEAQGSDVRVAAGLDGRQRIIATAMPDGPLAGVRVVVGRDHATAFADIDAATR CCCCEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCCCEEEEEECCCCHHEECCHHHHH RGLVLIALGAALALAAALVAGRVFIRRPVERLLRTAAAWQAGDLAARTGLHGAAEFDRLG CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHH SKLDAMAATLQRSTAELRAEIQRGRALQAQQGTMLHELNHRVKNTLATVQALARQSRGSA HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH EVLEARILALSKTHDLLTREDWSGAPLREVLESELGPYRTGGDQIRLDGPDVSLSPREVL HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHH ALGLTVHELTTNAAKYGALSVREGRVRVAWSVAAGAAGERRLRLSWEERGGPPVRAPTRV HHCCCHHHHHCCHHHHCCEEEECCCEEEEEEEECCCCCCCEEEEEHHHCCCCCCCCCCCC GFGTRLIAGGVRRELAGTVDLAFEAAGLRCRLDVPLDPGLGTMLAPTG CCCHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure PLRFRFRTPLPLLRSRPRSPTLSLTTRILLLVLLALAPALAIQGYNEVALRASRDAAVR CCEEECCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCHHHH ADARATARDVAEDFAQVSDRMQQALDLISGDATVQAREPAACTAYLRRAAARLPHVLLIA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEE LTDPEGAVICDSAGAPAGSYSSRGRAYHRRALERGGYAVGGYAVGFQTRRPSIHFARAVH EECCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCEEECEEEEEEECCCCCEEEEHEEE AGDSGGAPAGVLLAAVDLDWLSDHLEQALHQAETAITVTDRDGLIIARRPDEAAWIGRPI CCCCCCCCHHHEEEEHHHHHHHHHHHHHHHHHHCEEEEECCCCEEEEECCCCCCCCCCCC PPDRVAMLEAQGSDVRVAAGLDGRQRIIATAMPDGPLAGVRVVVGRDHATAFADIDAATR CCCCEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCCCEEEEEECCCCHHEECCHHHHH RGLVLIALGAALALAAALVAGRVFIRRPVERLLRTAAAWQAGDLAARTGLHGAAEFDRLG CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHH SKLDAMAATLQRSTAELRAEIQRGRALQAQQGTMLHELNHRVKNTLATVQALARQSRGSA HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH EVLEARILALSKTHDLLTREDWSGAPLREVLESELGPYRTGGDQIRLDGPDVSLSPREVL HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHH ALGLTVHELTTNAAKYGALSVREGRVRVAWSVAAGAAGERRLRLSWEERGGPPVRAPTRV HHCCCHHHHHCCHHHHCCEEEECCCEEEEEEEECCCCCCCEEEEEHHHCCCCCCCCCCCC GFGTRLIAGGVRRELAGTVDLAFEAAGLRCRLDVPLDPGLGTMLAPTG CCCHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA