| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
Click here to switch to the map view.
The map label for this gene is 170747644
Identifier: 170747644
GI number: 170747644
Start: 1281132
End: 1282058
Strand: Reverse
Name: 170747644
Synonym: Mrad2831_1217
Alternate gene names: NA
Gene position: 1282058-1281132 (Counterclockwise)
Preceding gene: 170747645
Following gene: 170747643
Centisome position: 21.09
GC content: 45.2
Gene sequence:
>927_bases TTGATCGTGCCGAAGCCTTTCCCAAGCGCCAGTAAGGCGCGAAAGCCAAAAGTGGCTTGTCTTGGGCATGACATCTATTT TGAGAATCACTACTGCGAAAAGTCGACTGAGAAATACGATGTCGGGTGGTTTTCTTTTGATCACTTTTCCGGTGGTTATT ATAAAGAACTCACAAGGTTTCGACCAGATGTTACACTCGTATTTAGGCCAGAGCTACATGATGGCGTCAATGTCAAATCG ATTCCGGGTCTGAAAATAGGATTCTCTACAGAGCCTATGCCTAAAATATCTAACGGAGCAATACAGCGATCGTCAGAAAC CGACAGACGGATGCGGATGCTTGAGCACCTTAACTTTCAAGCATTCGACGCGGTATATCATTACGACCAGAATAGCTCAT CATTCGCCCAAAGCTTGGGCCTGAGATTTTCAGGATTTCATCGAATACCTATCAACACAGATTTATTTCACCCTTTTAAT AAGCCACCGGCGAACTGGGACGTGGTCTTTGTTGGAAAGGCGACCCCAAGAAGAATCGAGATACTCCAAATCTTGAAGAG TTACAATCTAACATTTCTATGGATAGAGCACGGCATTTCCGGCAAATCACTAGCAGAGGTGTTTAGACGTTCAAAGTGCA TATTAAATATACATGCAGACGATATTACAGCTCTCGAGCCTCGTGTCTATCTTGCGGCAGCCTGTGGGGTCCCTGTTTTA TCTGATCCATACGGCAACGAAACATTCCCGATGGATGACTACGTTCGGGTCATGAATATGACTGATCTATCGGTGTCGGC AATCCGATCCACGATTTCAGAGATTGGTGCGGCAACAAAGAATCAGTCGCCGAAGCAATTATCACATAAGCTGCGTATGA TGAGCACGGAGCACTTTGTAGGCCGTCTCATCAACAAGTTCACTTAA
Upstream 100 bases:
>100_bases CCTTGGATCGAATGAACAAAGTTGAAGCGCTTCGTCATGCGCTAAAGCTGGACCGAAATATCGATAGGACGATCGACAAT AAAATAAGCAGGAGCTGACG
Downstream 100 bases:
>100_bases GGCGGGGATGCAACATGCAAAACTCGGATCTATTTTTGCCTTCTTGGTATGAGCGTCGAGTTGCCGTCGATTATTATGAC GACCGGATTGGCGAAAATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MIVPKPFPSASKARKPKVACLGHDIYFENHYCEKSTEKYDVGWFSFDHFSGGYYKELTRFRPDVTLVFRPELHDGVNVKS IPGLKIGFSTEPMPKISNGAIQRSSETDRRMRMLEHLNFQAFDAVYHYDQNSSSFAQSLGLRFSGFHRIPINTDLFHPFN KPPANWDVVFVGKATPRRIEILQILKSYNLTFLWIEHGISGKSLAEVFRRSKCILNIHADDITALEPRVYLAAACGVPVL SDPYGNETFPMDDYVRVMNMTDLSVSAIRSTISEIGAATKNQSPKQLSHKLRMMSTEHFVGRLINKFT
Sequences:
>Translated_308_residues MIVPKPFPSASKARKPKVACLGHDIYFENHYCEKSTEKYDVGWFSFDHFSGGYYKELTRFRPDVTLVFRPELHDGVNVKS IPGLKIGFSTEPMPKISNGAIQRSSETDRRMRMLEHLNFQAFDAVYHYDQNSSSFAQSLGLRFSGFHRIPINTDLFHPFN KPPANWDVVFVGKATPRRIEILQILKSYNLTFLWIEHGISGKSLAEVFRRSKCILNIHADDITALEPRVYLAAACGVPVL SDPYGNETFPMDDYVRVMNMTDLSVSAIRSTISEIGAATKNQSPKQLSHKLRMMSTEHFVGRLINKFT >Mature_308_residues MIVPKPFPSASKARKPKVACLGHDIYFENHYCEKSTEKYDVGWFSFDHFSGGYYKELTRFRPDVTLVFRPELHDGVNVKS IPGLKIGFSTEPMPKISNGAIQRSSETDRRMRMLEHLNFQAFDAVYHYDQNSSSFAQSLGLRFSGFHRIPINTDLFHPFN KPPANWDVVFVGKATPRRIEILQILKSYNLTFLWIEHGISGKSLAEVFRRSKCILNIHADDITALEPRVYLAAACGVPVL SDPYGNETFPMDDYVRVMNMTDLSVSAIRSTISEIGAATKNQSPKQLSHKLRMMSTEHFVGRLINKFT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35089; Mature: 35089
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVPKPFPSASKARKPKVACLGHDIYFENHYCEKSTEKYDVGWFSFDHFSGGYYKELTRF CCCCCCCCCCHHCCCCCEEEEEEEEEECCCCCCCCCCEEECCEEEECCCCCCHHHHHHHC RPDVTLVFRPELHDGVNVKSIPGLKIGFSTEPMPKISNGAIQRSSETDRRMRMLEHLNFQ CCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHH AFDAVYHYDQNSSSFAQSLGLRFSGFHRIPINTDLFHPFNKPPANWDVVFVGKATPRRIE HHHHHHEECCCCHHHHHHHCCEECCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCHHHH ILQILKSYNLTFLWIEHGISGKSLAEVFRRSKCILNIHADDITALEPRVYLAAACGVPVL HHHHHHHCCEEEEEEECCCCHHHHHHHHHCCCEEEEEECCCEEECCCCEEEEEECCCCEE SDPYGNETFPMDDYVRVMNMTDLSVSAIRSTISEIGAATKNQSPKQLSHKLRMMSTEHFV CCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH GRLINKFT HHHHHHCC >Mature Secondary Structure MIVPKPFPSASKARKPKVACLGHDIYFENHYCEKSTEKYDVGWFSFDHFSGGYYKELTRF CCCCCCCCCCHHCCCCCEEEEEEEEEECCCCCCCCCCEEECCEEEECCCCCCHHHHHHHC RPDVTLVFRPELHDGVNVKSIPGLKIGFSTEPMPKISNGAIQRSSETDRRMRMLEHLNFQ CCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHH AFDAVYHYDQNSSSFAQSLGLRFSGFHRIPINTDLFHPFNKPPANWDVVFVGKATPRRIE HHHHHHEECCCCHHHHHHHCCEECCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCHHHH ILQILKSYNLTFLWIEHGISGKSLAEVFRRSKCILNIHADDITALEPRVYLAAACGVPVL HHHHHHHCCEEEEEEECCCCHHHHHHHHHCCCEEEEEECCCEEECCCCEEEEEECCCCEE SDPYGNETFPMDDYVRVMNMTDLSVSAIRSTISEIGAATKNQSPKQLSHKLRMMSTEHFV CCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH GRLINKFT HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA