| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is epsM [H]
Identifier: 170747625
GI number: 170747625
Start: 1256830
End: 1257489
Strand: Reverse
Name: epsM [H]
Synonym: Mrad2831_1195
Alternate gene names: 170747625
Gene position: 1257489-1256830 (Counterclockwise)
Preceding gene: 170747626
Following gene: 170747624
Centisome position: 20.69
GC content: 74.24
Gene sequence:
>660_bases GTGACCGGGCCCGGGCAGCGGCTCGCGCTGATCGGCGGCGGCGGATTCTCCAAGGAGATCGCCGAGATCGCGCGCGCCCT CGGCCACACGGTCGAGGATACCTACTCCACTTCTCCGGAGGTCCAGGTCGGCCGTCACCGCGGCTATCTCGACGCGCTGC TCGCCGACCGGGCGGAGTTCGACGGCGTCGTGCTGGCGGTCGGCGGCGTGAGCCGGCGCGCGATCCGGGCGCGGGCCGAG CTGATCGCGTGGCTCGACCGGCACGGCCTCCCCTGCCCCGCCCTGGTCTCGCCTCGCGCGATCGTGAGCCCGGACGTCGC AATCGGCGCCGGCGCCTTCGTGGCGCACGGGGTGATCGTCAACGCCGATGCCCGGCTCGGGCGCTTCTGCGTGCTGAACT CGGCGGCCATCGTCGGCCACGACACGGTCGTCGGCGACAACACCACGATCTCGCCGGGCGCCTTCGTCGGCGGCCGCTGC ACGATCGGCGCCGACAGCCTCGTCGGGCCGCTCGCCAAGGTTCTGCAGGGCCTCACCCTCGGCCAGGGCGTCACGGTCGG CATGGGCTGCAACGTCCTGCGCGCGCTGCCCGACGACGCCACGATCTGGCCCCGGGCGGACATCGTCGCCCCGGCACCGA AGCCGGCCGGTCAGGCCTGA
Upstream 100 bases:
>100_bases CGACCGTCGAATCCGTGGTCGACGCCATCGCGTTCCTGATGTCGCCCCAGGCCCGGCACGTCACCGGCGAGATCCTGCGC GTCGACGGCGGGGCCGTGCT
Downstream 100 bases:
>100_bases TGGGCGCGCGTTTGCTGGGCGTGGTCGGCCACACTAAGCTATTCGTTTCGCGATGAACGGGCTCCGGTCCGCGCATCGGC AGGAGTCATCATGAGCGCGC
Product: putative acetyltransferase
Products: cofactor [C]
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MTGPGQRLALIGGGGFSKEIAEIARALGHTVEDTYSTSPEVQVGRHRGYLDALLADRAEFDGVVLAVGGVSRRAIRARAE LIAWLDRHGLPCPALVSPRAIVSPDVAIGAGAFVAHGVIVNADARLGRFCVLNSAAIVGHDTVVGDNTTISPGAFVGGRC TIGADSLVGPLAKVLQGLTLGQGVTVGMGCNVLRALPDDATIWPRADIVAPAPKPAGQA
Sequences:
>Translated_219_residues MTGPGQRLALIGGGGFSKEIAEIARALGHTVEDTYSTSPEVQVGRHRGYLDALLADRAEFDGVVLAVGGVSRRAIRARAE LIAWLDRHGLPCPALVSPRAIVSPDVAIGAGAFVAHGVIVNADARLGRFCVLNSAAIVGHDTVVGDNTTISPGAFVGGRC TIGADSLVGPLAKVLQGLTLGQGVTVGMGCNVLRALPDDATIWPRADIVAPAPKPAGQA >Mature_218_residues TGPGQRLALIGGGGFSKEIAEIARALGHTVEDTYSTSPEVQVGRHRGYLDALLADRAEFDGVVLAVGGVSRRAIRARAEL IAWLDRHGLPCPALVSPRAIVSPDVAIGAGAFVAHGVIVNADARLGRFCVLNSAAIVGHDTVVGDNTTISPGAFVGGRCT IGADSLVGPLAKVLQGLTLGQGVTVGMGCNVLRALPDDATIWPRADIVAPAPKPAGQA
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]
COG id: COG0110
COG function: function code R; Acetyltransferase (isoleucine patch superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018357 - InterPro: IPR013817 - InterPro: IPR020019 - InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22323; Mature: 22192
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPGQRLALIGGGGFSKEIAEIARALGHTVEDTYSTSPEVQVGRHRGYLDALLADRAEF CCCCCCEEEEEECCCCHHHHHHHHHHHCCCHHHHCCCCCCEEECCCCCHHHHHHHHHHCC DGVVLAVGGVSRRAIRARAELIAWLDRHGLPCPALVSPRAIVSPDVAIGAGAFVAHGVIV CCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEE NADARLGRFCVLNSAAIVGHDTVVGDNTTISPGAFVGGRCTIGADSLVGPLAKVLQGLTL ECCCCCCEEEEECCCEEEECCEEECCCCEECCCCEECCEEEECCHHHHHHHHHHHHCCCC GQGVTVGMGCNVLRALPDDATIWPRADIVAPAPKPAGQA CCCEEECCCCHHHHHCCCCCCCCCCCCEECCCCCCCCCC >Mature Secondary Structure TGPGQRLALIGGGGFSKEIAEIARALGHTVEDTYSTSPEVQVGRHRGYLDALLADRAEF CCCCCEEEEEECCCCHHHHHHHHHHHCCCHHHHCCCCCCEEECCCCCHHHHHHHHHHCC DGVVLAVGGVSRRAIRARAELIAWLDRHGLPCPALVSPRAIVSPDVAIGAGAFVAHGVIV CCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEE NADARLGRFCVLNSAAIVGHDTVVGDNTTISPGAFVGGRCTIGADSLVGPLAKVLQGLTL ECCCCCCEEEEECCCEEEECCEEECCCCEECCCCEECCEEEECCHHHHHHHHHHHHCCCC GQGVTVGMGCNVLRALPDDATIWPRADIVAPAPKPAGQA CCCEEECCCCHHHHHCCCCCCCCCCCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: pre-cofactor [C]
Specific reaction: pre-cofactor = cofactor [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]