Click here to switch to the map view.

The map label for this gene is dedA [C]

Identifier: 170747616

GI number: 170747616

Start: 1246585

End: 1247652

Strand: Reverse

Name: dedA [C]

Synonym: Mrad2831_1186

Alternate gene names: 170747616

Gene position: 1247652-1246585 (Counterclockwise)

Preceding gene: 170747617

Following gene: 170747615

Centisome position: 20.53

GC content: 73.5

Gene sequence:

>1068_bases
ATGTCCTTCCTGCACGATCTGCCGATCGCCGACCTGATCGCGCATTACGGCTACCTGGCCATCTTCGTCATCATCACCCT
GGAGAGCGCCGGGCTGCCCCTGCCCGGCGAGACGGTGCTGCTGACCTCGGCGGCCTACGCGGGCAGCACCGGCAACATCA
ACATCGCCGTCGTCGTGGCGATCGCCGCGACCGCCGCCATCCTGGGCGACAATGCCGGCTACTGGGTCGGCCGCCGCTGG
GGCCTGCCCCTGCTCCTGCGCAAGGGGCACCTGATCGGGCTCGACCACGGCCGGCTCAAGCTCGGCCAGTACCTGTTCCG
CCGGCACGGCGGGAAGATCGTGTTCTTCGGCCGCTTCACCGCGATGCTCCGGGCCTACGCGGCCGTCCTGGCCGGCGTGA
ACAAGCTCGACGCGCGCCGCTTCATGGCCTTCAACGCCCTCGGCGGCGTGGCCTGGGCCTCGATCATGGGGTTCGGCGCC
TACCTGTGCGGCCGGTCGATCGAGAACGTGATGGGGCCGGTCGGCCTCGGGCTGCTGGCCTTCGTCCTCCTGGGCGCCGT
CGCCCTGTGGCTGTTCATGCGCCGGCACGAGGCGCGCCTGATGGTCGCCGCCGAGGCCGAGATCCCGGGTCCGCTCGGCG
GGGGGCTCGGCGAGGCGCGGGCCGAGCCTGTCCCGGGGCCTGTCCCGGCGCGCGGCGGCGTGGACCCGGACAGCCCCGTC
CAGGCGGAGTTCCAGAATCAGATCGAGGCGCTCCTGGCCCAGCGGTCGCGCGCGGCGCCGCAGGCCCCCGCGCGCGCGGC
CGTCCGGACCCGGCGCGCGCCCTGGCCCCTGTGGTTCAAGATCCCCGTGCTGCTCGTCGCCGCCGGCGCCGGCATGGCGG
TGATCTCCTGGCACGACGGCGTCACCGGCGGCTTCTACGGACGTCTGATCGGGCATGTCGGGATCCTCGGCATCGCCCTG
ATCCTCGTCGTCCCGGCCCTCCTCCTCCTGGTGGTCGGCCGGCGGCTCCCGCGTCCGGAGGACGAGGCCGACGCGGAGTC
CGAGGAGGCCGTCGGGCTGGCGGCGTGA

Upstream 100 bases:

>100_bases
GCGCCCTCCGGCACCGGCTGATCGGCCGGATCGTCGATCCGCCCCGGAGCGGCCACGTTTGTCGGCGACAGCGCGCGGCA
CCGATCCGCGAGGAGACCCC

Downstream 100 bases:

>100_bases
CCGCCGCGCCGGACGGCCCTCGCGCTCCCGGTGCAGGGTTGACCGGTCCCGGAGCCGATCGTACAGCCGGCCTCGACCCG
ACAGGGGCGCCCCGTCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MSFLHDLPIADLIAHYGYLAIFVIITLESAGLPLPGETVLLTSAAYAGSTGNINIAVVVAIAATAAILGDNAGYWVGRRW
GLPLLLRKGHLIGLDHGRLKLGQYLFRRHGGKIVFFGRFTAMLRAYAAVLAGVNKLDARRFMAFNALGGVAWASIMGFGA
YLCGRSIENVMGPVGLGLLAFVLLGAVALWLFMRRHEARLMVAAEAEIPGPLGGGLGEARAEPVPGPVPARGGVDPDSPV
QAEFQNQIEALLAQRSRAAPQAPARAAVRTRRAPWPLWFKIPVLLVAAGAGMAVISWHDGVTGGFYGRLIGHVGILGIAL
ILVVPALLLLVVGRRLPRPEDEADAESEEAVGLAA

Sequences:

>Translated_355_residues
MSFLHDLPIADLIAHYGYLAIFVIITLESAGLPLPGETVLLTSAAYAGSTGNINIAVVVAIAATAAILGDNAGYWVGRRW
GLPLLLRKGHLIGLDHGRLKLGQYLFRRHGGKIVFFGRFTAMLRAYAAVLAGVNKLDARRFMAFNALGGVAWASIMGFGA
YLCGRSIENVMGPVGLGLLAFVLLGAVALWLFMRRHEARLMVAAEAEIPGPLGGGLGEARAEPVPGPVPARGGVDPDSPV
QAEFQNQIEALLAQRSRAAPQAPARAAVRTRRAPWPLWFKIPVLLVAAGAGMAVISWHDGVTGGFYGRLIGHVGILGIAL
ILVVPALLLLVVGRRLPRPEDEADAESEEAVGLAA
>Mature_354_residues
SFLHDLPIADLIAHYGYLAIFVIITLESAGLPLPGETVLLTSAAYAGSTGNINIAVVVAIAATAAILGDNAGYWVGRRWG
LPLLLRKGHLIGLDHGRLKLGQYLFRRHGGKIVFFGRFTAMLRAYAAVLAGVNKLDARRFMAFNALGGVAWASIMGFGAY
LCGRSIENVMGPVGLGLLAFVLLGAVALWLFMRRHEARLMVAAEAEIPGPLGGGLGEARAEPVPGPVPARGGVDPDSPVQ
AEFQNQIEALLAQRSRAAPQAPARAAVRTRRAPWPLWFKIPVLLVAAGAGMAVISWHDGVTGGFYGRLIGHVGILGIALI
LVVPALLLLVVGRRLPRPEDEADAESEEAVGLAA

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=166, Percent_Identity=29.5180722891566, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 37457; Mature: 37325

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFLHDLPIADLIAHYGYLAIFVIITLESAGLPLPGETVLLTSAAYAGSTGNINIAVVVA
CCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHCCCCCCEEEEEHHH
IAATAAILGDNAGYWVGRRWGLPLLLRKGHLIGLDHGRLKLGQYLFRRHGGKIVFFGRFT
HHHHHHHHCCCCCEEEECCCCCCCEEECCCEEECCCCHHHHHHHHHHHCCCEEEEEHHHH
AMLRAYAAVLAGVNKLDARRFMAFNALGGVAWASIMGFGAYLCGRSIENVMGPVGLGLLA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVLLGAVALWLFMRRHEARLMVAAEAEIPGPLGGGLGEARAEPVPGPVPARGGVDPDSPV
HHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QAEFQNQIEALLAQRSRAAPQAPARAAVRTRRAPWPLWFKIPVLLVAAGAGMAVISWHDG
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCC
VTGGFYGRLIGHVGILGIALILVVPALLLLVVGRRLPRPEDEADAESEEAVGLAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SFLHDLPIADLIAHYGYLAIFVIITLESAGLPLPGETVLLTSAAYAGSTGNINIAVVVA
CCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHCCCCCCEEEEEHHH
IAATAAILGDNAGYWVGRRWGLPLLLRKGHLIGLDHGRLKLGQYLFRRHGGKIVFFGRFT
HHHHHHHHCCCCCEEEECCCCCCCEEECCCEEECCCCHHHHHHHHHHHCCCEEEEEHHHH
AMLRAYAAVLAGVNKLDARRFMAFNALGGVAWASIMGFGAYLCGRSIENVMGPVGLGLLA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVLLGAVALWLFMRRHEARLMVAAEAEIPGPLGGGLGEARAEPVPGPVPARGGVDPDSPV
HHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QAEFQNQIEALLAQRSRAAPQAPARAAVRTRRAPWPLWFKIPVLLVAAGAGMAVISWHDG
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCC
VTGGFYGRLIGHVGILGIALILVVPALLLLVVGRRLPRPEDEADAESEEAVGLAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]