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The map label for this gene is yibD [C]

Identifier: 170747614

GI number: 170747614

Start: 1243393

End: 1245798

Strand: Reverse

Name: yibD [C]

Synonym: Mrad2831_1184

Alternate gene names: 170747614

Gene position: 1245798-1243393 (Counterclockwise)

Preceding gene: 170747615

Following gene: 170747605

Centisome position: 20.5

GC content: 70.16

Gene sequence:

>2406_bases
ATGCAGGACGGTGCAGGCGCGAGCGCGCCGGGCTCGACCACGGCTCCGCCCGCGCTCGAGCCCTGGCAGGACGACTTCGC
CACGATCTACGCCAGCGGCCTGTTCGACCATATCGGCTACGCGACGCGCTATCCCGATGTCGGCCTCACCGACCTGTCGC
CCCTCGAGCACTACGTGAAGTACGGCGCCCGGCTCGGGCGCCGGCCCCGGGCCGACTTCACCGCGCCGCCGGACGAGACC
TTCGACGGCAGCTTCGTCAATCCCTTCGCGGCCTGGATCCGGGCGCGCGCCGAGACCCAGCCCGCGCCGGCCTGGAACCG
GCCGGTCGTCTCGGTCCTGTGCATCAGCTACAACCAGGCGGCCTTCATCCGGCAGACGCTGGAGAGCATCCTCGGCCAGG
CGACGGACTTTCCCTTCGAGCTGCTGGTCGGCGACGACCGCTCCACGGACGGGACCGCCGAGATCATCGCCGAGTACGCC
GCGCGCCACCCCAACCTCGTGGCGGTCCTGCGCAGCGAGAATCTCGGGCCGAACCGGAACTTCGCCGACCTCGCGGCGCG
CGCCCGCGGCGAGTTCGTGGCGATCTGCGAGGGCGACGATTACTGGACCGACCCGCGCAAGCTCCAGCGGCAGGTCGATT
TCCTGCGGGCGCGCCCGGAATTCACCCTCTGCTTCCACCGGGTGCGCGTCGTCTACGAGGACATGCCGGGGGTCGACGAG
CTGTACCCGAAGCAGTGCAGCCCGCAGCCGTCGCTGTCGGACCTCGTGGCGCACAACTTCGTCCAGACCAACAGCGTGCT
CTACCGCTGGCGCTACCACGGCGAGGAGGCGTTCGTGTTCGACGAGGGCATCGCCCCCGGCGACTGGTACGTCCACCTGA
TGCACGCCGAGGTCGGGCGCGTCGGCTTCCTGCCGGAGGTGATGGCGGTCTACCGCAAGCACGCCGCCGGGATGTGGGCC
ACCTACGCCACCGAGCTCGCCCGCCACAAGAAGCTCGGCAACTCCGAGATCGCGTTCTTCCGCAAGCTGCGCGGCCATTT
CGGCGGCCGCTACGCGGCGGGCTACGAGGCCGCGCAGAAATCGATCTTCCGGCGGCTGGCCGAGGCCTATCTCGACGAGG
AGGACGTGCCGAGCCTCGGGCGCCTGATCGACGCCAACCCCGACATCGCCCGGACGGCCCTGCACGATATGGGCCTCGAC
GCCCCCGAGGTGCTCACCGGCGACCCCGACGCCCTGCGCGCGTGGCTCATGGAGCAGCTCACGGTCAGCGTCATCGTCAC
GGCCTACAACCACGCCGCCGATATCGGCCGCTGCCTCGACGCGGTGCTGGGCCAGCGCGGGCTGTTCCGGCTGCAGGTCG
TGATCGGCGACGACAAGTCGACCGACGGCACCGCGGAGATCGTCGAGCGCTACCGGGCGCGCGACCCGGAGCGGATCGCG
GTGCGGCCCCGGCCGCACAATCTCGGCATGCTGCGCAACATGCAGGACTGCCTCGCCGCCTGCACGGGCCGGTACGTCGC
CTTCTGCGAGGCGGACGATTACTGGCTGTCGGACCGCAAGATCGCGATGCAGATGCGGATGCTGCGCAACGACCGCAAGC
TGGACATGTGCTTCAACTGGGTGCTGCTCCACTACCCGGCGACCGGCTCCTACGTCCCGCACGACGAGCAGGGCCGCTAT
CCGACCGGCACGATCAGCTTCCCGGTCCTGGCCAACTCGCCGCTCACCGCGAACTTCTCGTGCTGCTTCTACCGCGCCGA
GGCCCTGCGCCGGGTGCCGGAAGCCTATTACGCGAACGCCTCGGCGGCCGACTGGCTGATGAACCTCTACGTCGCCGACA
AGGGCCGGATCGCGTTCCTGCGGGAGCTGCTCTCGGTCTACACGGTCCAGGAGAAGGGCCAGTGGTCGGGCCTGCCGGAA
GACATCAAGAACGCCCGGATCGCGCAGTACCAGAAGGAGTTCGCCGCCATCTTCGGCGAGGGGCGCGGCTTCGAGAAGTA
CGAGGTCGGCTGCACGGTGGCCGAGCTCGACGGCGAGCTGCCGGATTCCTTCGCCCGCGCGAACCTGGAGGCCCCCCAGG
ACCGGGTCTGGGCCGAGATCCAGGACGGGCAGGTGGTGCTGGCCGGCTGGGTCGTCTCGGCGAGCCGCGCCAAGGCGACG
CTGATCGTGGAGGCCGACGGCGAGGTCCAGCGCGTCCCCGCGGACGTCCACCGGCCGGACGTGATCGCGGCGGTGCTGGG
CGACCTGCCGACCACGATGGAGGAGGCCCGCTGCGGCTTCCGCTTCACCCTGCCCTACGCGCTCCACCTCGAAGTGCTGC
TCTCCATCGAGGTCGAGCACGAGGTTGTGCCCTGGCTCTCGGTGATCTTCACCCACCGGGTGAAGCGGGCGGCCGAGCGC
GGCTGA

Upstream 100 bases:

>100_bases
GGCCGATAGACTTCGTGATCGTCTCTATCGGCCGCGTTGACCCTCCCCGCCCCGTGATCTAGGGAGCGGCCGGACGGGGC
GCGTGCGAGGGATCAGACCG

Downstream 100 bases:

>100_bases
TCGCGGGCGGGGCGTCGCGACACGCGGGGTGGCGCCCTTCGAGCCGGCCCTATCGCCGCCGACCGCCGAGGAGGTGGCGC
ACCCGGGCCAGCGGCGTGCG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 801; Mature: 801

Protein sequence:

>801_residues
MQDGAGASAPGSTTAPPALEPWQDDFATIYASGLFDHIGYATRYPDVGLTDLSPLEHYVKYGARLGRRPRADFTAPPDET
FDGSFVNPFAAWIRARAETQPAPAWNRPVVSVLCISYNQAAFIRQTLESILGQATDFPFELLVGDDRSTDGTAEIIAEYA
ARHPNLVAVLRSENLGPNRNFADLAARARGEFVAICEGDDYWTDPRKLQRQVDFLRARPEFTLCFHRVRVVYEDMPGVDE
LYPKQCSPQPSLSDLVAHNFVQTNSVLYRWRYHGEEAFVFDEGIAPGDWYVHLMHAEVGRVGFLPEVMAVYRKHAAGMWA
TYATELARHKKLGNSEIAFFRKLRGHFGGRYAAGYEAAQKSIFRRLAEAYLDEEDVPSLGRLIDANPDIARTALHDMGLD
APEVLTGDPDALRAWLMEQLTVSVIVTAYNHAADIGRCLDAVLGQRGLFRLQVVIGDDKSTDGTAEIVERYRARDPERIA
VRPRPHNLGMLRNMQDCLAACTGRYVAFCEADDYWLSDRKIAMQMRMLRNDRKLDMCFNWVLLHYPATGSYVPHDEQGRY
PTGTISFPVLANSPLTANFSCCFYRAEALRRVPEAYYANASAADWLMNLYVADKGRIAFLRELLSVYTVQEKGQWSGLPE
DIKNARIAQYQKEFAAIFGEGRGFEKYEVGCTVAELDGELPDSFARANLEAPQDRVWAEIQDGQVVLAGWVVSASRAKAT
LIVEADGEVQRVPADVHRPDVIAAVLGDLPTTMEEARCGFRFTLPYALHLEVLLSIEVEHEVVPWLSVIFTHRVKRAAER
G

Sequences:

>Translated_801_residues
MQDGAGASAPGSTTAPPALEPWQDDFATIYASGLFDHIGYATRYPDVGLTDLSPLEHYVKYGARLGRRPRADFTAPPDET
FDGSFVNPFAAWIRARAETQPAPAWNRPVVSVLCISYNQAAFIRQTLESILGQATDFPFELLVGDDRSTDGTAEIIAEYA
ARHPNLVAVLRSENLGPNRNFADLAARARGEFVAICEGDDYWTDPRKLQRQVDFLRARPEFTLCFHRVRVVYEDMPGVDE
LYPKQCSPQPSLSDLVAHNFVQTNSVLYRWRYHGEEAFVFDEGIAPGDWYVHLMHAEVGRVGFLPEVMAVYRKHAAGMWA
TYATELARHKKLGNSEIAFFRKLRGHFGGRYAAGYEAAQKSIFRRLAEAYLDEEDVPSLGRLIDANPDIARTALHDMGLD
APEVLTGDPDALRAWLMEQLTVSVIVTAYNHAADIGRCLDAVLGQRGLFRLQVVIGDDKSTDGTAEIVERYRARDPERIA
VRPRPHNLGMLRNMQDCLAACTGRYVAFCEADDYWLSDRKIAMQMRMLRNDRKLDMCFNWVLLHYPATGSYVPHDEQGRY
PTGTISFPVLANSPLTANFSCCFYRAEALRRVPEAYYANASAADWLMNLYVADKGRIAFLRELLSVYTVQEKGQWSGLPE
DIKNARIAQYQKEFAAIFGEGRGFEKYEVGCTVAELDGELPDSFARANLEAPQDRVWAEIQDGQVVLAGWVVSASRAKAT
LIVEADGEVQRVPADVHRPDVIAAVLGDLPTTMEEARCGFRFTLPYALHLEVLLSIEVEHEVVPWLSVIFTHRVKRAAER
G
>Mature_801_residues
MQDGAGASAPGSTTAPPALEPWQDDFATIYASGLFDHIGYATRYPDVGLTDLSPLEHYVKYGARLGRRPRADFTAPPDET
FDGSFVNPFAAWIRARAETQPAPAWNRPVVSVLCISYNQAAFIRQTLESILGQATDFPFELLVGDDRSTDGTAEIIAEYA
ARHPNLVAVLRSENLGPNRNFADLAARARGEFVAICEGDDYWTDPRKLQRQVDFLRARPEFTLCFHRVRVVYEDMPGVDE
LYPKQCSPQPSLSDLVAHNFVQTNSVLYRWRYHGEEAFVFDEGIAPGDWYVHLMHAEVGRVGFLPEVMAVYRKHAAGMWA
TYATELARHKKLGNSEIAFFRKLRGHFGGRYAAGYEAAQKSIFRRLAEAYLDEEDVPSLGRLIDANPDIARTALHDMGLD
APEVLTGDPDALRAWLMEQLTVSVIVTAYNHAADIGRCLDAVLGQRGLFRLQVVIGDDKSTDGTAEIVERYRARDPERIA
VRPRPHNLGMLRNMQDCLAACTGRYVAFCEADDYWLSDRKIAMQMRMLRNDRKLDMCFNWVLLHYPATGSYVPHDEQGRY
PTGTISFPVLANSPLTANFSCCFYRAEALRRVPEAYYANASAADWLMNLYVADKGRIAFLRELLSVYTVQEKGQWSGLPE
DIKNARIAQYQKEFAAIFGEGRGFEKYEVGCTVAELDGELPDSFARANLEAPQDRVWAEIQDGQVVLAGWVVSASRAKAT
LIVEADGEVQRVPADVHRPDVIAAVLGDLPTTMEEARCGFRFTLPYALHLEVLLSIEVEHEVVPWLSVIFTHRVKRAAER
G

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 89751; Mature: 89751

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDGAGASAPGSTTAPPALEPWQDDFATIYASGLFDHIGYATRYPDVGLTDLSPLEHYVK
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHH
YGARLGRRPRADFTAPPDETFDGSFVNPFAAWIRARAETQPAPAWNRPVVSVLCISYNQA
HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHH
AFIRQTLESILGQATDFPFELLVGDDRSTDGTAEIIAEYAARHPNLVAVLRSENLGPNRN
HHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
FADLAARARGEFVAICEGDDYWTDPRKLQRQVDFLRARPEFTLCFHRVRVVYEDMPGVDE
HHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHH
LYPKQCSPQPSLSDLVAHNFVQTNSVLYRWRYHGEEAFVFDEGIAPGDWYVHLMHAEVGR
HCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCCCCCEEEEEECCCCC
VGFLPEVMAVYRKHAAGMWATYATELARHKKLGNSEIAFFRKLRGHFGGRYAAGYEAAQK
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
SIFRRLAEAYLDEEDVPSLGRLIDANPDIARTALHDMGLDAPEVLTGDPDALRAWLMEQL
HHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHH
TVSVIVTAYNHAADIGRCLDAVLGQRGLFRLQVVIGDDKSTDGTAEIVERYRARDPERIA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEE
VRPRPHNLGMLRNMQDCLAACTGRYVAFCEADDYWLSDRKIAMQMRMLRNDRKLDMCFNW
ECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCEECCHHHHHHHHHHHCCCCHHHHEEE
VLLHYPATGSYVPHDEQGRYPTGTISFPVLANSPLTANFSCCFYRAEALRRVPEAYYANA
EEEEECCCCCCCCCCCCCCCCCCCEEECEEECCCCCCCHHHHHHHHHHHHHCCHHHHCCC
SAADWLMNLYVADKGRIAFLRELLSVYTVQEKGQWSGLPEDIKNARIAQYQKEFAAIFGE
CHHHHHHHHEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
GRGFEKYEVGCTVAELDGELPDSFARANLEAPQDRVWAEIQDGQVVLAGWVVSASRAKAT
CCCCCEEECCEEEEECCCCCCHHHHHCCCCCCHHHHHEEECCCCEEEEEEEEECCCCEEE
LIVEADGEVQRVPADVHRPDVIAAVLGDLPTTMEEARCGFRFTLPYALHLEVLLSIEVEH
EEEECCCCCEECCCCCCCHHHHHHHHCCCCCCHHHHCCCEEEECCHHEEEEEEEEEEECH
EVVPWLSVIFTHRVKRAAERG
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQDGAGASAPGSTTAPPALEPWQDDFATIYASGLFDHIGYATRYPDVGLTDLSPLEHYVK
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHH
YGARLGRRPRADFTAPPDETFDGSFVNPFAAWIRARAETQPAPAWNRPVVSVLCISYNQA
HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHH
AFIRQTLESILGQATDFPFELLVGDDRSTDGTAEIIAEYAARHPNLVAVLRSENLGPNRN
HHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
FADLAARARGEFVAICEGDDYWTDPRKLQRQVDFLRARPEFTLCFHRVRVVYEDMPGVDE
HHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHH
LYPKQCSPQPSLSDLVAHNFVQTNSVLYRWRYHGEEAFVFDEGIAPGDWYVHLMHAEVGR
HCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCCCCCEEEEEECCCCC
VGFLPEVMAVYRKHAAGMWATYATELARHKKLGNSEIAFFRKLRGHFGGRYAAGYEAAQK
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
SIFRRLAEAYLDEEDVPSLGRLIDANPDIARTALHDMGLDAPEVLTGDPDALRAWLMEQL
HHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHH
TVSVIVTAYNHAADIGRCLDAVLGQRGLFRLQVVIGDDKSTDGTAEIVERYRARDPERIA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEE
VRPRPHNLGMLRNMQDCLAACTGRYVAFCEADDYWLSDRKIAMQMRMLRNDRKLDMCFNW
ECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCEECCHHHHHHHHHHHCCCCHHHHEEE
VLLHYPATGSYVPHDEQGRYPTGTISFPVLANSPLTANFSCCFYRAEALRRVPEAYYANA
EEEEECCCCCCCCCCCCCCCCCCCEEECEEECCCCCCCHHHHHHHHHHHHHCCHHHHCCC
SAADWLMNLYVADKGRIAFLRELLSVYTVQEKGQWSGLPEDIKNARIAQYQKEFAAIFGE
CHHHHHHHHEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
GRGFEKYEVGCTVAELDGELPDSFARANLEAPQDRVWAEIQDGQVVLAGWVVSASRAKAT
CCCCCEEECCEEEEECCCCCCHHHHHCCCCCCHHHHHEEECCCCEEEEEEEEECCCCEEE
LIVEADGEVQRVPADVHRPDVIAAVLGDLPTTMEEARCGFRFTLPYALHLEVLLSIEVEH
EEEECCCCCEECCCCCCCHHHHHHHHCCCCCCHHHHCCCEEEECCHHEEEEEEEEEEECH
EVVPWLSVIFTHRVKRAAERG
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]