Click here to switch to the map view.

The map label for this gene is 170747494

Identifier: 170747494

GI number: 170747494

Start: 1120623

End: 1121495

Strand: Reverse

Name: 170747494

Synonym: Mrad2831_1062

Alternate gene names: NA

Gene position: 1121495-1120623 (Counterclockwise)

Preceding gene: 170747495

Following gene: 170747489

Centisome position: 18.45

GC content: 69.53

Gene sequence:

>873_bases
ATGAACGTACGCATCCGGCTGGGACGGAAGACGGCACTGATCGGCGCGGCCTTGGTCTCGGCCGCCGGCCTCGCGGGCTG
CGAGACCGTCGGCAGCGCGGCCGGCCCGCGGCAATACGCGGTCCTGGAGAAGGACACGACCGGCGCCACGAACGTCAACA
TCGCGTCCCTGACCGAGGTGGTGCAGCGCAACCCGAACGACGCGGCGGCCTACAACACCCGCGGCGCCGCCTACGCCCGC
GCCGGCCAGTTCAACGACGCCATCGCCGACTTCACCAAGGCGATCCAGCTCGATCCGAACTCCGCCTCCGCCTACAACAA
CCGCGCCCTCGCGAACCGCCAGATCGGCCGCGACGGCCCGGCACTGCAGGACTTCTCCAAGGCGATCGGGATCGATCCGA
ATTACGGGCCGGCCTATATCGGCCGCGCCAACGTCGAGCGCGCCCAGGGCAACCTCGACCAGGCCCTGAACGACCTCAAC
GTCGCGATCCGCCTGAGCCCCGAATCCGCGCAGGCCTATCACGCCCGCGGCCTCGTGAAGCAGAAGCAGGGCCAGGACAC
ACAGGCGATCGCCGATTTCGACGCCGCCATCGACCGCGACCCGTTCGTGGCCGCGCCCTACGCGGCCCGCGGCCAGAGCC
TGATCGCGACCAACCAGTACGCGAAGGCGATCGAAGACTACAACGCCGCGCTGAACGTGAACGCCAAGGACGCCACGTCC
TGGGCCTATCGGGGCCTCGCCTACGAGAAGCAGGGCCAGCGCAAGGAGGCGATGGAGAACTACCAGCGCGCCTCGACGAT
CGACCCCAACAACACCGTCGCGCGGGCCGGCCTCGGCCGCGTGCAGGGCGGGGTCGGCTCGCTGTTCAACTGA

Upstream 100 bases:

>100_bases
CCCGACTTCGGGTGTGCCCGGCGCAGGGCGCGGGCTCTTGGACTGTGAGGGGCGGGGCGGGCACGCGCGGAGCGGGCGAC
GCCTCGGGGAGAGTGGGGCG

Downstream 100 bases:

>100_bases
TCCCGGTCATCCCGGCGCCCTCGTCCCGGGGCGCCGGAAGTCTCCTTCGTCGAGGCCGCGTCGCGGTCCTCAGGCCGCCA
GCAGGCCGTTCTCGTCCTGC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MNVRIRLGRKTALIGAALVSAAGLAGCETVGSAAGPRQYAVLEKDTTGATNVNIASLTEVVQRNPNDAAAYNTRGAAYAR
AGQFNDAIADFTKAIQLDPNSASAYNNRALANRQIGRDGPALQDFSKAIGIDPNYGPAYIGRANVERAQGNLDQALNDLN
VAIRLSPESAQAYHARGLVKQKQGQDTQAIADFDAAIDRDPFVAAPYAARGQSLIATNQYAKAIEDYNAALNVNAKDATS
WAYRGLAYEKQGQRKEAMENYQRASTIDPNNTVARAGLGRVQGGVGSLFN

Sequences:

>Translated_290_residues
MNVRIRLGRKTALIGAALVSAAGLAGCETVGSAAGPRQYAVLEKDTTGATNVNIASLTEVVQRNPNDAAAYNTRGAAYAR
AGQFNDAIADFTKAIQLDPNSASAYNNRALANRQIGRDGPALQDFSKAIGIDPNYGPAYIGRANVERAQGNLDQALNDLN
VAIRLSPESAQAYHARGLVKQKQGQDTQAIADFDAAIDRDPFVAAPYAARGQSLIATNQYAKAIEDYNAALNVNAKDATS
WAYRGLAYEKQGQRKEAMENYQRASTIDPNNTVARAGLGRVQGGVGSLFN
>Mature_290_residues
MNVRIRLGRKTALIGAALVSAAGLAGCETVGSAAGPRQYAVLEKDTTGATNVNIASLTEVVQRNPNDAAAYNTRGAAYAR
AGQFNDAIADFTKAIQLDPNSASAYNNRALANRQIGRDGPALQDFSKAIGIDPNYGPAYIGRANVERAQGNLDQALNDLN
VAIRLSPESAQAYHARGLVKQKQGQDTQAIADFDAAIDRDPFVAAPYAARGQSLIATNQYAKAIEDYNAALNVNAKDATS
WAYRGLAYEKQGQRKEAMENYQRASTIDPNNTVARAGLGRVQGGVGSLFN

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 8 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI310123097, Length=227, Percent_Identity=28.6343612334802, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI310131789, Length=227, Percent_Identity=28.6343612334802, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI310110582, Length=227, Percent_Identity=28.6343612334802, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI32307148, Length=241, Percent_Identity=24.4813278008299, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI32307150, Length=241, Percent_Identity=24.4813278008299, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI170784867, Length=250, Percent_Identity=23.2, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI167466177, Length=241, Percent_Identity=25.3112033195021, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI167466175, Length=241, Percent_Identity=25.3112033195021, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI54607135, Length=237, Percent_Identity=28.6919831223629, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115532690, Length=217, Percent_Identity=27.6497695852535, Blast_Score=78, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI115532692, Length=217, Percent_Identity=27.6497695852535, Blast_Score=77, Evalue=8e-15,
Organism=Saccharomyces cerevisiae, GI6319387, Length=205, Percent_Identity=24.8780487804878, Blast_Score=62, Evalue=7e-11,
Organism=Drosophila melanogaster, GI17647755, Length=228, Percent_Identity=25, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24585827, Length=228, Percent_Identity=25, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24585829, Length=228, Percent_Identity=25, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24647123, Length=182, Percent_Identity=25.2747252747253, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008940
- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 30751; Mature: 30751

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVRIRLGRKTALIGAALVSAAGLAGCETVGSAAGPRQYAVLEKDTTGATNVNIASLTEV
CCEEEEECCHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHH
VQRNPNDAAAYNTRGAAYARAGQFNDAIADFTKAIQLDPNSASAYNNRALANRQIGRDGP
HHCCCCCHHHCCCCCCHHHCCCCCHHHHHHHHHHEEECCCCCCHHCCHHHHHCCCCCCCC
ALQDFSKAIGIDPNYGPAYIGRANVERAQGNLDQALNDLNVAIRLSPESAQAYHARGLVK
HHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHCCEEEEEECCCHHHHHHHHHHHH
QKQGQDTQAIADFDAAIDRDPFVAAPYAARGQSLIATNQYAKAIEDYNAALNVNAKDATS
HHCCCCHHHHHHHHHHCCCCCCEECCHHHCCCEEEEHHHHHHHHHHCCCEEECCCCCHHH
WAYRGLAYEKQGQRKEAMENYQRASTIDPNNTVARAGLGRVQGGVGSLFN
HHHHCCCHHHCCCHHHHHHHHHHHCCCCCCCHHHHHCHHHHCCCHHCCCC
>Mature Secondary Structure
MNVRIRLGRKTALIGAALVSAAGLAGCETVGSAAGPRQYAVLEKDTTGATNVNIASLTEV
CCEEEEECCHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHH
VQRNPNDAAAYNTRGAAYARAGQFNDAIADFTKAIQLDPNSASAYNNRALANRQIGRDGP
HHCCCCCHHHCCCCCCHHHCCCCCHHHHHHHHHHEEECCCCCCHHCCHHHHHCCCCCCCC
ALQDFSKAIGIDPNYGPAYIGRANVERAQGNLDQALNDLNVAIRLSPESAQAYHARGLVK
HHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHCCEEEEEECCCHHHHHHHHHHHH
QKQGQDTQAIADFDAAIDRDPFVAAPYAARGQSLIATNQYAKAIEDYNAALNVNAKDATS
HHCCCCHHHHHHHHHHCCCCCCEECCHHHCCCEEEEHHHHHHHHHHCCCEEECCCCCHHH
WAYRGLAYEKQGQRKEAMENYQRASTIDPNNTVARAGLGRVQGGVGSLFN
HHHHCCCHHHCCCHHHHHHHHHHHCCCCCCCHHHHHCHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]