Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

Click here to switch to the map view.

The map label for this gene is yedY [C]

Identifier: 170747440

GI number: 170747440

Start: 1064708

End: 1065667

Strand: Reverse

Name: yedY [C]

Synonym: Mrad2831_1008

Alternate gene names: 170747440

Gene position: 1065667-1064708 (Counterclockwise)

Preceding gene: 170747441

Following gene: 170747437

Centisome position: 17.53

GC content: 71.88

Gene sequence:

>960_bases
ATGATCCTCCACCGCCGCAAGCTCCTCACCGCGGGCGCGGGCCTGATGGGCACCGCCCTCCTCGGCGGCTGCGACCGGTT
CGCCGGGAGCGAGACGGGGCGGCGCACCCTCCAGGTCGGCGAGGACGCGAACCAGTACGTCCAGCGCCTGCTGATGTCGC
CCGCGACCCTGGCCCGGGAATTTCCGGCCTCGATGATCTCGCCCTGGTTCAAGCCGAACGGCACCATCGACCCGCCGGAC
CGCGCCTACCGGGCGCTGGCGGCGCAGAAGTTCTCGGACTTCAGGCTGACGGTGGACGGGCTGGTCCAGACCCCGCTGTC
GCTGAGCCTCGCGGACCTGCGCGCCCTGCCCGCGCGCACCCAGATCACCCGTCACGATTGCGTGGAGGGCTGGAGCTGCA
TCGGGCAGTGGAGCGGCGTGCCGCTCGCCGAGGTGCTGAAGAAGGCCGGGCTGAAGCCGCAGGCGCGCTTCGCGGTGTTC
CACTGTGCCGACACGCTGGAGTTCGAGGCCGGTCCCAAGGGCGGCGGCAAGGGGCGAGATCAGGGAGCGTCCCTCTGGCG
CCCGACCCATCCGGGCGCGGTGCGCGCGGCCTATATCCGGCTCGCCGCCGCAGACGACTGGGGCGGCCCGGCCACCGCCA
CCGACGCCCCCAAGGACGATTGGGGCCAGGGCAGCCCGGCCCCGGAGCCCGAGCCGGCCGGGATCCCGATCCGCTACTAC
GAGAGCATCGACCTCTACGACGCCGTCAACCCGCAGACGATCCTGGCCTACGACCTCAACGGCAAGCCGCTGCCGGTCTC
GAACGGCGCGCCGCTCCGCCTGCGGGTCGAGCGCCAGCTCGGCTACAAGCAGGCCAAGTACGTGATGCGGGTCGAGATGG
TGGAATCGCTCGCCGGGATCGGCCAGGGCAGCGGCGGCTACTGGGAGGATCGCGGCTACGAATGGTACGCGGGGATCTGA

Upstream 100 bases:

>100_bases
TCCACGTGCTGCTCGTGATCGTGTCCGGGCTCGTCAACAACATGCGCGGCATGATCACCGGCTGGTTCAGCCTCGGCCGT
CCCGAGAAGGAGCCCGCCCG

Downstream 100 bases:

>100_bases
GCGCTCAGCGAGACTTCGCCGCGCGCTCGCGCTCGATCGCCTCCATCAGCGCGGCGTTGATGCGAGCCTGCCAACCCGGG
CCCTGGGCGCGGAAATGCGC

Product: molybdopterin binding oxidoreductase

Products: NA

Alternate protein names: Oxidoreductase; Conserved Hypothethical Protein Oxidoreductase Domain; Molybdopterin Cofactor-Containing Protein; Reductase; Sulfite Oxidase

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MILHRRKLLTAGAGLMGTALLGGCDRFAGSETGRRTLQVGEDANQYVQRLLMSPATLAREFPASMISPWFKPNGTIDPPD
RAYRALAAQKFSDFRLTVDGLVQTPLSLSLADLRALPARTQITRHDCVEGWSCIGQWSGVPLAEVLKKAGLKPQARFAVF
HCADTLEFEAGPKGGGKGRDQGASLWRPTHPGAVRAAYIRLAAADDWGGPATATDAPKDDWGQGSPAPEPEPAGIPIRYY
ESIDLYDAVNPQTILAYDLNGKPLPVSNGAPLRLRVERQLGYKQAKYVMRVEMVESLAGIGQGSGGYWEDRGYEWYAGI

Sequences:

>Translated_319_residues
MILHRRKLLTAGAGLMGTALLGGCDRFAGSETGRRTLQVGEDANQYVQRLLMSPATLAREFPASMISPWFKPNGTIDPPD
RAYRALAAQKFSDFRLTVDGLVQTPLSLSLADLRALPARTQITRHDCVEGWSCIGQWSGVPLAEVLKKAGLKPQARFAVF
HCADTLEFEAGPKGGGKGRDQGASLWRPTHPGAVRAAYIRLAAADDWGGPATATDAPKDDWGQGSPAPEPEPAGIPIRYY
ESIDLYDAVNPQTILAYDLNGKPLPVSNGAPLRLRVERQLGYKQAKYVMRVEMVESLAGIGQGSGGYWEDRGYEWYAGI
>Mature_319_residues
MILHRRKLLTAGAGLMGTALLGGCDRFAGSETGRRTLQVGEDANQYVQRLLMSPATLAREFPASMISPWFKPNGTIDPPD
RAYRALAAQKFSDFRLTVDGLVQTPLSLSLADLRALPARTQITRHDCVEGWSCIGQWSGVPLAEVLKKAGLKPQARFAVF
HCADTLEFEAGPKGGGKGRDQGASLWRPTHPGAVRAAYIRLAAADDWGGPATATDAPKDDWGQGSPAPEPEPAGIPIRYY
ESIDLYDAVNPQTILAYDLNGKPLPVSNGAPLRLRVERQLGYKQAKYVMRVEMVESLAGIGQGSGGYWEDRGYEWYAGI

Specific function: Unknown

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Transmembrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34612; Mature: 34612

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILHRRKLLTAGAGLMGTALLGGCDRFAGSETGRRTLQVGEDANQYVQRLLMSPATLARE
CCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCHHHHHHH
FPASMISPWFKPNGTIDPPDRAYRALAAQKFSDFRLTVDGLVQTPLSLSLADLRALPART
CCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEHHHHCCCCHHHHHHHHHCCCHH
QITRHDCVEGWSCIGQWSGVPLAEVLKKAGLKPQARFAVFHCADTLEFEAGPKGGGKGRD
HHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEEEECCCEEECCCCCCCCCCCC
QGASLWRPTHPGAVRAAYIRLAAADDWGGPATATDAPKDDWGQGSPAPEPEPAGIPIRYY
CCCCCCCCCCCCHHEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
ESIDLYDAVNPQTILAYDLNGKPLPVSNGAPLRLRVERQLGYKQAKYVMRVEMVESLAGI
CCCCHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEHHHHCHHHHHHHHHHHHHHHHHCC
GQGSGGYWEDRGYEWYAGI
CCCCCCCCCCCCEEEECCC
>Mature Secondary Structure
MILHRRKLLTAGAGLMGTALLGGCDRFAGSETGRRTLQVGEDANQYVQRLLMSPATLARE
CCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCHHHHHHH
FPASMISPWFKPNGTIDPPDRAYRALAAQKFSDFRLTVDGLVQTPLSLSLADLRALPART
CCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEHHHHCCCCHHHHHHHHHCCCHH
QITRHDCVEGWSCIGQWSGVPLAEVLKKAGLKPQARFAVFHCADTLEFEAGPKGGGKGRD
HHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEEEECCCEEECCCCCCCCCCCC
QGASLWRPTHPGAVRAAYIRLAAADDWGGPATATDAPKDDWGQGSPAPEPEPAGIPIRYY
CCCCCCCCCCCCHHEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
ESIDLYDAVNPQTILAYDLNGKPLPVSNGAPLRLRVERQLGYKQAKYVMRVEMVESLAGI
CCCCHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEHHHHCHHHHHHHHHHHHHHHHHCC
GQGSGGYWEDRGYEWYAGI
CCCCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA