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The map label for this gene is ydjC [C]

Identifier: 170747405

GI number: 170747405

Start: 1028785

End: 1029627

Strand: Reverse

Name: ydjC [C]

Synonym: Mrad2831_0972

Alternate gene names: 170747405

Gene position: 1029627-1028785 (Counterclockwise)

Preceding gene: 170747406

Following gene: 170747404

Centisome position: 16.94

GC content: 76.99

Gene sequence:

>843_bases
GTGAAGCGTCTGGTCGTCACCGCGGATGATTTCGGGTTGAGCCCCGAGGTCAACGAGGCCGTCGAGCAGGCGCATCGCGA
CGGGATCCTCACGGCGGCGAGCCTGATGGTCTCGGCGCCGGCCGCCGCCGACGCGGTGGCCCGGGCCAAACGGCTGCCGT
CCCTGCGCGTCGGGCTGCACCTCGTCCTCGTGGAGGCGTGGCCGACCCTGCCGGCCGCCGAACTGCCCGACCTGACCGAC
GCGGCCGGCCTGATGCGCGCCGACATGGCCCGCCTCGGCCTCGACTTCGCCCGCAGGCCCGCGGCCCGGCGCCAGCTCGC
CGCGGAGATCCGCGCGCAGTTCGAGGCCTACCGGGCGACCGGCCTGCCGCTGGACCACGTCAACGCCCACAAGCACTTCC
ACGTCCACCCGCTGATCGCCGGGGCGGTGCTGCGCATCGGCCGCGACTTCGGGATGCGCGCCCTGCGGGTACCCCGGGAG
CCGCGGGAGATCCTGCGCCGCGCCGAGCCCGGTGCCCGGCCACGGCCGGCCCTCGACATCGCCCCCTGGGCGGCGCTGCT
CGCCGTCCGCGCCCGGCAGGCCGGGCTGCTGATCCCCGACCGCACCCTCGGCCTCGCGTGGTCCGGTGCGATGACGCCCG
CCCGCGTCGCGGCTCTGCTGGCCGAACTCCCGGACGGGCTGACCGAGCTCTACACCCACCCGGCCACCGCCGGCGGCTTC
CCCGGCGAGGCGCCGGGCTACCGCTACGCCGACGAGCGGGACGCGCTGATCGCCCCCGCGTCCCTGTCGGCCGCCGGCGC
GTCGGGCGCGGCCCGCGGCGGGTTCTCCGACTTCCTGGGTTGA

Upstream 100 bases:

>100_bases
CGGGGTCCGGGGCCTGCGGCCCCGGCGGGGTGTGGGGCAGAGCCCCGCACCTCTTCCAGGGCTCCGCCCTGGACCCGTCG
ATACCCGTTACGAGGTTTGC

Downstream 100 bases:

>100_bases
TCCAGGCCGATATCTGACTTTAGTCAGATACCATGGATCCTGCCGAGATCGCCCGCGTCCGCCGCTTCGCCCGCGCCGTC
ACCGCCGAGGTCGGCGCGCT

Product: hopanoid biosynthesis associated protein HpnK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKRLVVTADDFGLSPEVNEAVEQAHRDGILTAASLMVSAPAAADAVARAKRLPSLRVGLHLVLVEAWPTLPAAELPDLTD
AAGLMRADMARLGLDFARRPAARRQLAAEIRAQFEAYRATGLPLDHVNAHKHFHVHPLIAGAVLRIGRDFGMRALRVPRE
PREILRRAEPGARPRPALDIAPWAALLAVRARQAGLLIPDRTLGLAWSGAMTPARVAALLAELPDGLTELYTHPATAGGF
PGEAPGYRYADERDALIAPASLSAAGASGAARGGFSDFLG

Sequences:

>Translated_280_residues
MKRLVVTADDFGLSPEVNEAVEQAHRDGILTAASLMVSAPAAADAVARAKRLPSLRVGLHLVLVEAWPTLPAAELPDLTD
AAGLMRADMARLGLDFARRPAARRQLAAEIRAQFEAYRATGLPLDHVNAHKHFHVHPLIAGAVLRIGRDFGMRALRVPRE
PREILRRAEPGARPRPALDIAPWAALLAVRARQAGLLIPDRTLGLAWSGAMTPARVAALLAELPDGLTELYTHPATAGGF
PGEAPGYRYADERDALIAPASLSAAGASGAARGGFSDFLG
>Mature_280_residues
MKRLVVTADDFGLSPEVNEAVEQAHRDGILTAASLMVSAPAAADAVARAKRLPSLRVGLHLVLVEAWPTLPAAELPDLTD
AAGLMRADMARLGLDFARRPAARRQLAAEIRAQFEAYRATGLPLDHVNAHKHFHVHPLIAGAVLRIGRDFGMRALRVPRE
PREILRRAEPGARPRPALDIAPWAALLAVRARQAGLLIPDRTLGLAWSGAMTPARVAALLAELPDGLTELYTHPATAGGF
PGEAPGYRYADERDALIAPASLSAAGASGAARGGFSDFLG

Specific function: Unknown

COG id: COG3394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0249 family [H]

Homologues:

Organism=Homo sapiens, GI63054868, Length=164, Percent_Identity=33.5365853658537, Blast_Score=65, Evalue=5e-11,
Organism=Escherichia coli, GI1788028, Length=164, Percent_Identity=31.7073170731707, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002509
- InterPro:   IPR006879
- InterPro:   IPR022948 [H]

Pfam domain/function: PF04794 YdjC [H]

EC number: NA

Molecular weight: Translated: 29697; Mature: 29697

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLVVTADDFGLSPEVNEAVEQAHRDGILTAASLMVSAPAAADAVARAKRLPSLRVGLH
CCEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHE
LVLVEAWPTLPAAELPDLTDAAGLMRADMARLGLDFARRPAARRQLAAEIRAQFEAYRAT
EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHC
GLPLDHVNAHKHFHVHPLIAGAVLRIGRDFGMRALRVPREPREILRRAEPGARPRPALDI
CCCHHHCCCCCCEEEHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHCCCCCCCCCCCCH
APWAALLAVRARQAGLLIPDRTLGLAWSGAMTPARVAALLAELPDGLTELYTHPATAGGF
HHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCC
PGEAPGYRYADERDALIAPASLSAAGASGAARGGFSDFLG
CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHCC
>Mature Secondary Structure
MKRLVVTADDFGLSPEVNEAVEQAHRDGILTAASLMVSAPAAADAVARAKRLPSLRVGLH
CCEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHE
LVLVEAWPTLPAAELPDLTDAAGLMRADMARLGLDFARRPAARRQLAAEIRAQFEAYRAT
EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHC
GLPLDHVNAHKHFHVHPLIAGAVLRIGRDFGMRALRVPREPREILRRAEPGARPRPALDI
CCCHHHCCCCCCEEEHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHCCCCCCCCCCCCH
APWAALLAVRARQAGLLIPDRTLGLAWSGAMTPARVAALLAELPDGLTELYTHPATAGGF
HHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCC
PGEAPGYRYADERDALIAPASLSAAGASGAARGGFSDFLG
CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA