| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is degP [H]
Identifier: 170747227
GI number: 170747227
Start: 832053
End: 833183
Strand: Reverse
Name: degP [H]
Synonym: Mrad2831_0793
Alternate gene names: 170747227
Gene position: 833183-832053 (Counterclockwise)
Preceding gene: 170747229
Following gene: 170747226
Centisome position: 13.71
GC content: 73.3
Gene sequence:
>1131_bases GTGCCGGATCGTACCGTGCGCATCCTGTTCGCCGCGGTCGTGGTCCTGCTGGCGCTCTACGTCGCCCAGCCCTACCTGCA GCCGCTGCTCTACGCGGCCGACACCCCCCGGGCCGTGACGGCCCGCGGCGATCTGGCGCCGGCCGAGGCCTCGACGGTGG CGCTGTTCGAGCGCGCGAGCCCGTCCGTCGTTCACGTTTTCGCGCAGAGCGCCGCCCAGAACCGCGACCTCCTCGACCTC GACGACCAGGGCGGCGAGCAGGGCGGGACCCAGACCGGCACCGGCTTCGTCTGGGACGGCGCCGGCCACATCGTCACCAA CACCCATGTCGTGCAGAACGCCGCGCGGAGCGGCGGCTCGGTCTCGGTCCGGATGAGCGACGGCGAGGTCGTGCCCGCCA CCCTCGTCGGGATGGCGCCGTCCTACGACCTCGCGGTCCTGCAGCTCGGGCGGGTGCGGAACATGCCGCCGCCGCTGGCG ATCGGCACCTCGGCGGATCTCAAGGTCGGGCAGTCGGCCTTCGCCATCGGCAACCCGTTCGGCCTCGACCACACGCTGAC GACCGGCGTCATCAGCGCCGTGCGGCGGCGGATGCCGACGAGCGAGGGCCGCGAATTGTCCGGCGTGATCCAGACGGACG CGGCGATCAACCCCGGCAATTCCGGCGGCCCGCTCCTCGATTCAGCGGGCCGGCTGATCGGGGTCAACACCGCCATCGTG TCGCCGTCCGGCGCCAGCGCCGGGATCGGGTTCGCGATCCCCGTCGACGTGGTGAACCGGATCGTGCCGGAGCTGATCAA GGCCGGACGGGTGCGCAATCCCGGCATCGGCATCATCGCCGCCCAGGAGGCGGCCACCGCGCGGCTCGGCATCGACGGCG TGGTGATCGTGCGGGTGCTGCCCGGCTCCCCGGCCGCGCAGGCCGGCCTGCGCGGCGTCGATCCGCAGACCGGCGACATC GGCGACGTGATCGTCGAGGCCAATGACCGCCCCGTCCACCGCCTCGCCGACCTGACGGCGGCCATCGAGGAGGCCGGCCT CGGCGCCGGCGTGACCCTCAAGGTCGAGCGCGATGGCCGGATCCGGCAGGTCCGCGTCACCACCGCCGAGGTCGCGGAGA ACCGGCGATGA
Upstream 100 bases:
>100_bases CCTCTGTGTTGACGCCCCGATCCTGAACGCGCACTTAAGGCTCCGCCCGTCGCGGGCCCGCCCGCGCGCGTTCCCGCGCG CCCATGCATCGGAGACACCC
Downstream 100 bases:
>100_bases CGCACCCGAACCGCCGCCTGACCCTGCCCCTGCCCCTGCTGCTGATCCTCGTCGCCGGCGCCGCGCAGGCCGGCGAGGTC CCCACCCGCGCGCGCCTCTG
Product: 2-alkenal reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MPDRTVRILFAAVVVLLALYVAQPYLQPLLYAADTPRAVTARGDLAPAEASTVALFERASPSVVHVFAQSAAQNRDLLDL DDQGGEQGGTQTGTGFVWDGAGHIVTNTHVVQNAARSGGSVSVRMSDGEVVPATLVGMAPSYDLAVLQLGRVRNMPPPLA IGTSADLKVGQSAFAIGNPFGLDHTLTTGVISAVRRRMPTSEGRELSGVIQTDAAINPGNSGGPLLDSAGRLIGVNTAIV SPSGASAGIGFAIPVDVVNRIVPELIKAGRVRNPGIGIIAAQEAATARLGIDGVVIVRVLPGSPAAQAGLRGVDPQTGDI GDVIVEANDRPVHRLADLTAAIEEAGLGAGVTLKVERDGRIRQVRVTTAEVAENRR
Sequences:
>Translated_376_residues MPDRTVRILFAAVVVLLALYVAQPYLQPLLYAADTPRAVTARGDLAPAEASTVALFERASPSVVHVFAQSAAQNRDLLDL DDQGGEQGGTQTGTGFVWDGAGHIVTNTHVVQNAARSGGSVSVRMSDGEVVPATLVGMAPSYDLAVLQLGRVRNMPPPLA IGTSADLKVGQSAFAIGNPFGLDHTLTTGVISAVRRRMPTSEGRELSGVIQTDAAINPGNSGGPLLDSAGRLIGVNTAIV SPSGASAGIGFAIPVDVVNRIVPELIKAGRVRNPGIGIIAAQEAATARLGIDGVVIVRVLPGSPAAQAGLRGVDPQTGDI GDVIVEANDRPVHRLADLTAAIEEAGLGAGVTLKVERDGRIRQVRVTTAEVAENRR >Mature_375_residues PDRTVRILFAAVVVLLALYVAQPYLQPLLYAADTPRAVTARGDLAPAEASTVALFERASPSVVHVFAQSAAQNRDLLDLD DQGGEQGGTQTGTGFVWDGAGHIVTNTHVVQNAARSGGSVSVRMSDGEVVPATLVGMAPSYDLAVLQLGRVRNMPPPLAI GTSADLKVGQSAFAIGNPFGLDHTLTTGVISAVRRRMPTSEGRELSGVIQTDAAINPGNSGGPLLDSAGRLIGVNTAIVS PSGASAGIGFAIPVDVVNRIVPELIKAGRVRNPGIGIIAAQEAATARLGIDGVVIVRVLPGSPAAQAGLRGVDPQTGDIG DVIVEANDRPVHRLADLTAAIEEAGLGAGVTLKVERDGRIRQVRVTTAEVAENRR
Specific function: Serine Protease That Is Required At High Temperature. Involved In The Degradation Of Damaged Proteins. It Can Degrade Icia, Ada, Casein And Globin. Shared Specificity With Degq. [C]
COG id: COG0265
COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PDZ (DHR) domains [H]
Homologues:
Organism=Homo sapiens, GI22129776, Length=307, Percent_Identity=32.8990228013029, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI4506141, Length=302, Percent_Identity=31.4569536423841, Blast_Score=119, Evalue=3e-27, Organism=Homo sapiens, GI7019477, Length=345, Percent_Identity=32.463768115942, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI24308541, Length=320, Percent_Identity=30.3125, Blast_Score=110, Evalue=2e-24, Organism=Escherichia coli, GI1786356, Length=290, Percent_Identity=37.9310344827586, Blast_Score=177, Evalue=1e-45, Organism=Escherichia coli, GI1789629, Length=333, Percent_Identity=35.7357357357357, Blast_Score=165, Evalue=6e-42, Organism=Escherichia coli, GI1789630, Length=377, Percent_Identity=33.1564986737401, Blast_Score=137, Evalue=8e-34, Organism=Drosophila melanogaster, GI24646839, Length=355, Percent_Identity=29.5774647887324, Blast_Score=116, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001478 - InterPro: IPR009003 - InterPro: IPR011782 - InterPro: IPR001254 - InterPro: IPR001940 [H]
Pfam domain/function: PF00595 PDZ; PF00089 Trypsin [H]
EC number: 3.4.21.- [C]
Molecular weight: Translated: 38725; Mature: 38593
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS50106 PDZ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDRTVRILFAAVVVLLALYVAQPYLQPLLYAADTPRAVTARGDLAPAEASTVALFERAS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEECCCC PSVVHVFAQSAAQNRDLLDLDDQGGEQGGTQTGTGFVWDGAGHIVTNTHVVQNAARSGGS CCEEHHHHHHHHCCCCCEECCCCCCCCCCCCCCCEEEECCCCCEEECHHHHHHHHCCCCE VSVRMSDGEVVPATLVGMAPSYDLAVLQLGRVRNMPPPLAIGTSADLKVGQSAFAIGNPF EEEEECCCCCCCHHEECCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEECCCCC GLDHTLTTGVISAVRRRMPTSEGRELSGVIQTDAAINPGNSGGPLLDSAGRLIGVNTAIV CCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCHHCCCCEEEEEEEEE SPSGASAGIGFAIPVDVVNRIVPELIKAGRVRNPGIGIIAAQEAATARLGIDGVVIVRVL CCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHCCCCEEEEEEEE PGSPAAQAGLRGVDPQTGDIGDVIVEANDRPVHRLADLTAAIEEAGLGAGVTLKVERDGR CCCCHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCC IRQVRVTTAEVAENRR EEEEEEEHHHHHCCCC >Mature Secondary Structure PDRTVRILFAAVVVLLALYVAQPYLQPLLYAADTPRAVTARGDLAPAEASTVALFERAS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEECCCC PSVVHVFAQSAAQNRDLLDLDDQGGEQGGTQTGTGFVWDGAGHIVTNTHVVQNAARSGGS CCEEHHHHHHHHCCCCCEECCCCCCCCCCCCCCCEEEECCCCCEEECHHHHHHHHCCCCE VSVRMSDGEVVPATLVGMAPSYDLAVLQLGRVRNMPPPLAIGTSADLKVGQSAFAIGNPF EEEEECCCCCCCHHEECCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEECCCCC GLDHTLTTGVISAVRRRMPTSEGRELSGVIQTDAAINPGNSGGPLLDSAGRLIGVNTAIV CCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCHHCCCCEEEEEEEEE SPSGASAGIGFAIPVDVVNRIVPELIKAGRVRNPGIGIIAAQEAATARLGIDGVVIVRVL CCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHCCCCEEEEEEEE PGSPAAQAGLRGVDPQTGDIGDVIVEANDRPVHRLADLTAAIEEAGLGAGVTLKVERDGR CCCCHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCC IRQVRVTTAEVAENRR EEEEEEEHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: Serine endopeptidases [C]
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]