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The map label for this gene is clpS1 [H]

Identifier: 170747222

GI number: 170747222

Start: 828174

End: 828560

Strand: Reverse

Name: clpS1 [H]

Synonym: Mrad2831_0788

Alternate gene names: 170747222

Gene position: 828560-828174 (Counterclockwise)

Preceding gene: 170747223

Following gene: 170747221

Centisome position: 13.63

GC content: 63.05

Gene sequence:

>387_bases
ATGCAGGGCACCGCGACTTCGACGAGGGACCACCGGCCGGCGCGCATCGCGGTCACGGCATCCGGTTCGCGCGCCCCCGG
GGGCGACGACCGGTCCAACACCGCGATCATCACGCGGACCAAGCCGCGGACAAAGCGGCCCAGCCTGTACCGGGTACTCC
TTCTGAACGACGACTATACGCCGATGGAGTTCGTGGTCCTGGTGGTCGAGCGGTTCTTCAACAAGAGCCACGAGGACGCC
TACCACATCATGATGCACGTGCATCAGAACGGGGTCGGCGAGTGCGGGGTCTTCACCTACGAGGTGGCGGAGACCAAGGT
GACGCAGGTCATGGACTTCGCGCGCAAACACCAACATCCTCTCCAGTGCGTTATGGAAAAGAAATAG

Upstream 100 bases:

>100_bases
GAGCGCTGCTCCCGGCAGGCCAGGATCAGGATCGGCCGTCAGGGCCGGCGGCGCCCGCTCCGAGCGAGGGATCGGTTCGA
CGCACATGACACAGGTCCCC

Downstream 100 bases:

>100_bases
GCGCCGCTCGCGGTAGGCACGAAGGACAGAGGCCAGCTTTGCCAAGCTTCTCACGCAGCCTAGAACAAGCCCTCCACCGC
GCCCTGGCGCTCGCCGGCGA

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MQGTATSTRDHRPARIAVTASGSRAPGGDDRSNTAIITRTKPRTKRPSLYRVLLLNDDYTPMEFVVLVVERFFNKSHEDA
YHIMMHVHQNGVGECGVFTYEVAETKVTQVMDFARKHQHPLQCVMEKK

Sequences:

>Translated_128_residues
MQGTATSTRDHRPARIAVTASGSRAPGGDDRSNTAIITRTKPRTKRPSLYRVLLLNDDYTPMEFVVLVVERFFNKSHEDA
YHIMMHVHQNGVGECGVFTYEVAETKVTQVMDFARKHQHPLQCVMEKK
>Mature_128_residues
MQGTATSTRDHRPARIAVTASGSRAPGGDDRSNTAIITRTKPRTKRPSLYRVLLLNDDYTPMEFVVLVVERFFNKSHEDA
YHIMMHVHQNGVGECGVFTYEVAETKVTQVMDFARKHQHPLQCVMEKK

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

Organism=Escherichia coli, GI1787108, Length=89, Percent_Identity=51.685393258427, Blast_Score=102, Evalue=7e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 14560; Mature: 14560

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGTATSTRDHRPARIAVTASGSRAPGGDDRSNTAIITRTKPRTKRPSLYRVLLLNDDYT
CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCC
PMEFVVLVVERFFNKSHEDAYHIMMHVHQNGVGECGVFTYEVAETKVTQVMDFARKHQHP
HHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCC
LQCVMEKK
HHHEECCC
>Mature Secondary Structure
MQGTATSTRDHRPARIAVTASGSRAPGGDDRSNTAIITRTKPRTKRPSLYRVLLLNDDYT
CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCC
PMEFVVLVVERFFNKSHEDAYHIMMHVHQNGVGECGVFTYEVAETKVTQVMDFARKHQHP
HHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCC
LQCVMEKK
HHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]